co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00030

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015015: heparan sulfate proteoglycan biosynthetic process, enzymatic modification	0.00E+00
2	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
3	GO:0071076: RNA 3' uridylation	2.41E-05
4	GO:1903705: positive regulation of production of siRNA involved in RNA interference	2.41E-05
5	GO:0034976: response to endoplasmic reticulum stress	3.83E-05
6	GO:0009058: biosynthetic process	6.07E-05
7	GO:0030259: lipid glycosylation	6.16E-05
8	GO:0051028: mRNA transport	8.10E-05
9	GO:0045836: positive regulation of meiotic nuclear division	1.09E-04
10	GO:0010366: negative regulation of ethylene biosynthetic process	1.09E-04
11	GO:0055070: copper ion homeostasis	1.62E-04
12	GO:0060964: regulation of gene silencing by miRNA	1.62E-04
13	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	1.62E-04
14	GO:0019048: modulation by virus of host morphology or physiology	1.62E-04
15	GO:0006646: phosphatidylethanolamine biosynthetic process	2.21E-04
16	GO:1903830: magnesium ion transmembrane transport	2.21E-04
17	GO:0000380: alternative mRNA splicing, via spliceosome	2.84E-04
18	GO:0045927: positive regulation of growth	2.84E-04
19	GO:0045087: innate immune response	3.05E-04
20	GO:0007035: vacuolar acidification	3.51E-04
21	GO:0006397: mRNA processing	4.03E-04
22	GO:0033962: cytoplasmic mRNA processing body assembly	4.20E-04
23	GO:0015693: magnesium ion transport	4.92E-04
24	GO:0019827: stem cell population maintenance	5.68E-04
25	GO:0048507: meristem development	7.25E-04
26	GO:0016571: histone methylation	8.07E-04
27	GO:0051321: meiotic cell cycle	1.76E-03
28	GO:0061077: chaperone-mediated protein folding	1.76E-03
29	GO:0010082: regulation of root meristem growth	1.98E-03
30	GO:0045492: xylan biosynthetic process	2.10E-03
31	GO:0010501: RNA secondary structure unwinding	2.33E-03
32	GO:0015991: ATP hydrolysis coupled proton transport	2.33E-03
33	GO:0015986: ATP synthesis coupled proton transport	2.57E-03
34	GO:0045454: cell redox homeostasis	2.77E-03
35	GO:0016032: viral process	2.95E-03
36	GO:0006950: response to stress	4.05E-03
37	GO:0048481: plant ovule development	4.34E-03
38	GO:0009817: defense response to fungus, incompatible interaction	4.34E-03
39	GO:0009834: plant-type secondary cell wall biogenesis	4.64E-03
40	GO:0010043: response to zinc ion	4.80E-03
41	GO:0009910: negative regulation of flower development	4.80E-03
42	GO:0030001: metal ion transport	5.59E-03
43	GO:0008643: carbohydrate transport	6.42E-03
44	GO:0006457: protein folding	7.78E-03
45	GO:0006417: regulation of translation	8.02E-03
46	GO:0006979: response to oxidative stress	1.23E-02
47	GO:0010468: regulation of gene expression	1.59E-02
48	GO:0009409: response to cold	1.65E-02
49	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.29E-02
50	GO:0009408: response to heat	2.95E-02
51	GO:0009735: response to cytokinin	4.16E-02

Rank	GO Term	Adjusted P value
1	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
2	GO:0008476: protein-tyrosine sulfotransferase activity	0.00E+00
3	GO:0004306: ethanolamine-phosphate cytidylyltransferase activity	0.00E+00
4	GO:0017095: heparan sulfate 6-O-sulfotransferase activity	0.00E+00
5	GO:0003729: mRNA binding	4.59E-06
6	GO:0030275: LRR domain binding	2.41E-05
7	GO:0050265: RNA uridylyltransferase activity	2.41E-05
8	GO:0003756: protein disulfide isomerase activity	7.37E-05
9	GO:0051117: ATPase binding	3.51E-04
10	GO:0015020: glucuronosyltransferase activity	8.92E-04
11	GO:0046961: proton-transporting ATPase activity, rotational mechanism	9.78E-04
12	GO:0015095: magnesium ion transmembrane transporter activity	1.16E-03
13	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.76E-03
14	GO:0016779: nucleotidyltransferase activity	1.87E-03
15	GO:0046873: metal ion transmembrane transporter activity	2.45E-03
16	GO:0016853: isomerase activity	2.57E-03
17	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.35E-03
18	GO:0004004: ATP-dependent RNA helicase activity	4.05E-03
19	GO:0003723: RNA binding	6.16E-03
20	GO:0031625: ubiquitin protein ligase binding	8.02E-03
21	GO:0008026: ATP-dependent helicase activity	9.96E-03
22	GO:0016887: ATPase activity	4.03E-02
23	GO:0016757: transferase activity, transferring glycosyl groups	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0012510: trans-Golgi network transport vesicle membrane	2.41E-05
2	GO:0000932: P-body	1.81E-04
3	GO:0016471: vacuolar proton-transporting V-type ATPase complex	2.21E-04
4	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	2.84E-04
5	GO:0010494: cytoplasmic stress granule	7.25E-04
6	GO:0031307: integral component of mitochondrial outer membrane	1.07E-03
7	GO:0005802: trans-Golgi network	1.40E-03
8	GO:0005768: endosome	1.64E-03
9	GO:0000151: ubiquitin ligase complex	4.34E-03
10	GO:0015934: large ribosomal subunit	4.80E-03
11	GO:0000325: plant-type vacuole	4.80E-03
12	GO:0005834: heterotrimeric G-protein complex	8.77E-03
13	GO:0005654: nucleoplasm	1.10E-02
14	GO:0009506: plasmodesma	1.37E-02
15	GO:0000139: Golgi membrane	1.65E-02
16	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.04E-02
17	GO:0005794: Golgi apparatus	2.16E-02
18	GO:0005774: vacuolar membrane	4.23E-02
19	GO:0005777: peroxisome	4.89E-02