GO Enrichment Analysis of Co-expressed Genes with
AT3G63510
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 4 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0042407: cristae formation | 0.00E+00 |
| 6 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 7 | GO:0009658: chloroplast organization | 1.09E-05 |
| 8 | GO:0006457: protein folding | 3.25E-05 |
| 9 | GO:0006426: glycyl-tRNA aminoacylation | 7.75E-05 |
| 10 | GO:0042371: vitamin K biosynthetic process | 7.75E-05 |
| 11 | GO:0045036: protein targeting to chloroplast | 8.82E-05 |
| 12 | GO:0042254: ribosome biogenesis | 1.53E-04 |
| 13 | GO:0010020: chloroplast fission | 1.60E-04 |
| 14 | GO:0043039: tRNA aminoacylation | 1.85E-04 |
| 15 | GO:0006695: cholesterol biosynthetic process | 1.85E-04 |
| 16 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.85E-04 |
| 17 | GO:0006418: tRNA aminoacylation for protein translation | 2.52E-04 |
| 18 | GO:0000413: protein peptidyl-prolyl isomerization | 4.24E-04 |
| 19 | GO:0006424: glutamyl-tRNA aminoacylation | 4.49E-04 |
| 20 | GO:0043572: plastid fission | 4.49E-04 |
| 21 | GO:0051085: chaperone mediated protein folding requiring cofactor | 4.49E-04 |
| 22 | GO:0006241: CTP biosynthetic process | 4.49E-04 |
| 23 | GO:0006165: nucleoside diphosphate phosphorylation | 4.49E-04 |
| 24 | GO:0006228: UTP biosynthetic process | 4.49E-04 |
| 25 | GO:0010088: phloem development | 4.49E-04 |
| 26 | GO:0042742: defense response to bacterium | 5.81E-04 |
| 27 | GO:0006183: GTP biosynthetic process | 5.98E-04 |
| 28 | GO:0009793: embryo development ending in seed dormancy | 6.21E-04 |
| 29 | GO:0032543: mitochondrial translation | 7.57E-04 |
| 30 | GO:0006412: translation | 8.83E-04 |
| 31 | GO:0006796: phosphate-containing compound metabolic process | 9.24E-04 |
| 32 | GO:0010190: cytochrome b6f complex assembly | 9.24E-04 |
| 33 | GO:0006354: DNA-templated transcription, elongation | 9.24E-04 |
| 34 | GO:0042549: photosystem II stabilization | 9.24E-04 |
| 35 | GO:0009854: oxidative photosynthetic carbon pathway | 1.10E-03 |
| 36 | GO:0010555: response to mannitol | 1.10E-03 |
| 37 | GO:0042026: protein refolding | 1.10E-03 |
| 38 | GO:0045995: regulation of embryonic development | 1.29E-03 |
| 39 | GO:0007155: cell adhesion | 1.48E-03 |
| 40 | GO:0009642: response to light intensity | 1.48E-03 |
| 41 | GO:0032544: plastid translation | 1.69E-03 |
| 42 | GO:0009932: cell tip growth | 1.69E-03 |
| 43 | GO:0009657: plastid organization | 1.69E-03 |
| 44 | GO:0033384: geranyl diphosphate biosynthetic process | 1.91E-03 |
| 45 | GO:0006783: heme biosynthetic process | 1.91E-03 |
| 46 | GO:0045337: farnesyl diphosphate biosynthetic process | 1.91E-03 |
| 47 | GO:0043067: regulation of programmed cell death | 2.14E-03 |
| 48 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.14E-03 |
| 49 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.37E-03 |
| 50 | GO:0009773: photosynthetic electron transport in photosystem I | 2.61E-03 |
| 51 | GO:0006415: translational termination | 2.61E-03 |
| 52 | GO:0045037: protein import into chloroplast stroma | 2.86E-03 |
| 53 | GO:0010207: photosystem II assembly | 3.38E-03 |
| 54 | GO:0019344: cysteine biosynthetic process | 4.23E-03 |
| 55 | GO:0009409: response to cold | 4.38E-03 |
| 56 | GO:0009735: response to cytokinin | 4.64E-03 |
| 57 | GO:0007005: mitochondrion organization | 5.13E-03 |
| 58 | GO:0009411: response to UV | 5.45E-03 |
| 59 | GO:0016117: carotenoid biosynthetic process | 6.10E-03 |
| 60 | GO:0010197: polar nucleus fusion | 6.78E-03 |
| 61 | GO:0007018: microtubule-based movement | 7.13E-03 |
| 62 | GO:0010583: response to cyclopentenone | 8.22E-03 |
| 63 | GO:0016032: viral process | 8.22E-03 |
| 64 | GO:0010027: thylakoid membrane organization | 1.02E-02 |
| 65 | GO:0016126: sterol biosynthetic process | 1.02E-02 |
| 66 | GO:0009627: systemic acquired resistance | 1.10E-02 |
| 67 | GO:0015995: chlorophyll biosynthetic process | 1.14E-02 |
| 68 | GO:0015979: photosynthesis | 1.18E-02 |
| 69 | GO:0048481: plant ovule development | 1.22E-02 |
| 70 | GO:0008219: cell death | 1.22E-02 |
| 71 | GO:0045454: cell redox homeostasis | 1.23E-02 |
| 72 | GO:0009853: photorespiration | 1.45E-02 |
| 73 | GO:0042542: response to hydrogen peroxide | 1.68E-02 |
| 74 | GO:0009585: red, far-red light phototransduction | 2.14E-02 |
| 75 | GO:0046686: response to cadmium ion | 2.23E-02 |
| 76 | GO:0009624: response to nematode | 2.75E-02 |
| 77 | GO:0009790: embryo development | 3.61E-02 |
| 78 | GO:0006413: translational initiation | 3.86E-02 |
| 79 | GO:0040008: regulation of growth | 3.93E-02 |
| 80 | GO:0006414: translational elongation | 4.03E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 4 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 5 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 6 | GO:0019843: rRNA binding | 1.58E-06 |
| 7 | GO:0051920: peroxiredoxin activity | 2.12E-05 |
| 8 | GO:0016209: antioxidant activity | 3.81E-05 |
| 9 | GO:0004820: glycine-tRNA ligase activity | 7.75E-05 |
| 10 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 7.75E-05 |
| 11 | GO:0004831: tyrosine-tRNA ligase activity | 7.75E-05 |
| 12 | GO:0004655: porphobilinogen synthase activity | 7.75E-05 |
| 13 | GO:0003735: structural constituent of ribosome | 8.76E-05 |
| 14 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.75E-04 |
| 15 | GO:0004817: cysteine-tRNA ligase activity | 1.85E-04 |
| 16 | GO:0030267: glyoxylate reductase (NADP) activity | 3.11E-04 |
| 17 | GO:0002161: aminoacyl-tRNA editing activity | 3.11E-04 |
| 18 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.11E-04 |
| 19 | GO:0051082: unfolded protein binding | 3.43E-04 |
| 20 | GO:0004812: aminoacyl-tRNA ligase activity | 3.92E-04 |
| 21 | GO:0016149: translation release factor activity, codon specific | 4.49E-04 |
| 22 | GO:0004550: nucleoside diphosphate kinase activity | 4.49E-04 |
| 23 | GO:0008097: 5S rRNA binding | 4.49E-04 |
| 24 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.49E-04 |
| 25 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 5.98E-04 |
| 26 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 7.15E-04 |
| 27 | GO:0016462: pyrophosphatase activity | 9.24E-04 |
| 28 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.10E-03 |
| 29 | GO:0003746: translation elongation factor activity | 1.29E-03 |
| 30 | GO:0004427: inorganic diphosphatase activity | 1.29E-03 |
| 31 | GO:0003747: translation release factor activity | 1.91E-03 |
| 32 | GO:0004337: geranyltranstransferase activity | 1.91E-03 |
| 33 | GO:0044183: protein binding involved in protein folding | 2.61E-03 |
| 34 | GO:0004161: dimethylallyltranstransferase activity | 2.61E-03 |
| 35 | GO:0000049: tRNA binding | 2.86E-03 |
| 36 | GO:0031072: heat shock protein binding | 3.12E-03 |
| 37 | GO:0005524: ATP binding | 3.39E-03 |
| 38 | GO:0004176: ATP-dependent peptidase activity | 4.82E-03 |
| 39 | GO:0003729: mRNA binding | 5.05E-03 |
| 40 | GO:0042802: identical protein binding | 6.82E-03 |
| 41 | GO:0005507: copper ion binding | 8.13E-03 |
| 42 | GO:0004601: peroxidase activity | 8.30E-03 |
| 43 | GO:0008237: metallopeptidase activity | 9.36E-03 |
| 44 | GO:0008236: serine-type peptidase activity | 1.18E-02 |
| 45 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.18E-02 |
| 46 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.22E-02 |
| 47 | GO:0042803: protein homodimerization activity | 1.29E-02 |
| 48 | GO:0004222: metalloendopeptidase activity | 1.31E-02 |
| 49 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.49E-02 |
| 50 | GO:0003924: GTPase activity | 1.52E-02 |
| 51 | GO:0009055: electron carrier activity | 1.64E-02 |
| 52 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.83E-02 |
| 53 | GO:0043621: protein self-association | 1.83E-02 |
| 54 | GO:0005198: structural molecule activity | 1.88E-02 |
| 55 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.14E-02 |
| 56 | GO:0003777: microtubule motor activity | 2.30E-02 |
| 57 | GO:0016887: ATPase activity | 2.37E-02 |
| 58 | GO:0008565: protein transporter activity | 3.67E-02 |
| 59 | GO:0008017: microtubule binding | 4.19E-02 |
| 60 | GO:0005525: GTP binding | 4.44E-02 |
| 61 | GO:0003743: translation initiation factor activity | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 4.74E-31 |
| 2 | GO:0009507: chloroplast | 1.94E-27 |
| 3 | GO:0009941: chloroplast envelope | 1.10E-22 |
| 4 | GO:0009579: thylakoid | 4.58E-13 |
| 5 | GO:0031977: thylakoid lumen | 3.10E-11 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 4.70E-08 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 1.80E-07 |
| 8 | GO:0005840: ribosome | 1.36E-05 |
| 9 | GO:0010319: stromule | 3.77E-05 |
| 10 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 7.75E-05 |
| 11 | GO:0000428: DNA-directed RNA polymerase complex | 7.75E-05 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 2.52E-04 |
| 13 | GO:0009532: plastid stroma | 2.78E-04 |
| 14 | GO:0048046: apoplast | 3.96E-04 |
| 15 | GO:0005623: cell | 4.75E-04 |
| 16 | GO:0019898: extrinsic component of membrane | 5.25E-04 |
| 17 | GO:0046658: anchored component of plasma membrane | 9.73E-04 |
| 18 | GO:0005739: mitochondrion | 1.33E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.91E-03 |
| 20 | GO:0000311: plastid large ribosomal subunit | 2.86E-03 |
| 21 | GO:0009706: chloroplast inner membrane | 3.12E-03 |
| 22 | GO:0030095: chloroplast photosystem II | 3.38E-03 |
| 23 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.66E-03 |
| 24 | GO:0009536: plastid | 3.77E-03 |
| 25 | GO:0009505: plant-type cell wall | 3.89E-03 |
| 26 | GO:0042651: thylakoid membrane | 4.52E-03 |
| 27 | GO:0022626: cytosolic ribosome | 4.91E-03 |
| 28 | GO:0005871: kinesin complex | 6.10E-03 |
| 29 | GO:0009534: chloroplast thylakoid | 6.60E-03 |
| 30 | GO:0031225: anchored component of membrane | 9.13E-03 |
| 31 | GO:0009295: nucleoid | 9.36E-03 |
| 32 | GO:0005874: microtubule | 9.95E-03 |
| 33 | GO:0022625: cytosolic large ribosomal subunit | 1.08E-02 |
| 34 | GO:0005622: intracellular | 1.08E-02 |
| 35 | GO:0009707: chloroplast outer membrane | 1.22E-02 |
| 36 | GO:0005759: mitochondrial matrix | 3.80E-02 |