Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G62420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034484: raffinose catabolic process0.00E+00
2GO:0006792: regulation of sulfur utilization0.00E+00
3GO:0034644: cellular response to UV0.00E+00
4GO:0010200: response to chitin7.48E-08
5GO:2000022: regulation of jasmonic acid mediated signaling pathway2.04E-06
6GO:0006355: regulation of transcription, DNA-templated8.21E-06
7GO:0030162: regulation of proteolysis1.36E-05
8GO:0010439: regulation of glucosinolate biosynthetic process1.36E-05
9GO:0006351: transcription, DNA-templated2.46E-05
10GO:0050691: regulation of defense response to virus by host4.04E-05
11GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process5.34E-05
12GO:0009751: response to salicylic acid9.23E-05
13GO:0080185: effector dependent induction by symbiont of host immune response1.00E-04
14GO:0071712: ER-associated misfolded protein catabolic process1.00E-04
15GO:0071497: cellular response to freezing1.00E-04
16GO:0040007: growth1.38E-04
17GO:0080168: abscisic acid transport1.73E-04
18GO:0002229: defense response to oomycetes2.42E-04
19GO:0010411: xyloglucan metabolic process4.15E-04
20GO:0048573: photoperiodism, flowering4.15E-04
21GO:0010438: cellular response to sulfur starvation4.37E-04
22GO:0009817: defense response to fungus, incompatible interaction4.58E-04
23GO:0009737: response to abscisic acid4.78E-04
24GO:1902456: regulation of stomatal opening5.37E-04
25GO:0009414: response to water deprivation7.32E-04
26GO:0042546: cell wall biogenesis7.64E-04
27GO:2000070: regulation of response to water deprivation8.61E-04
28GO:0031347: regulation of defense response8.82E-04
29GO:0009753: response to jasmonic acid9.47E-04
30GO:2000031: regulation of salicylic acid mediated signaling pathway9.77E-04
31GO:0010099: regulation of photomorphogenesis9.77E-04
32GO:0019432: triglyceride biosynthetic process1.10E-03
33GO:0009873: ethylene-activated signaling pathway1.19E-03
34GO:0051555: flavonol biosynthetic process1.35E-03
35GO:0055062: phosphate ion homeostasis1.35E-03
36GO:0043069: negative regulation of programmed cell death1.35E-03
37GO:0010015: root morphogenesis1.49E-03
38GO:0000038: very long-chain fatty acid metabolic process1.49E-03
39GO:1903507: negative regulation of nucleic acid-templated transcription1.49E-03
40GO:0016024: CDP-diacylglycerol biosynthetic process1.63E-03
41GO:0009718: anthocyanin-containing compound biosynthetic process1.77E-03
42GO:0034605: cellular response to heat1.92E-03
43GO:0002237: response to molecule of bacterial origin1.92E-03
44GO:0005985: sucrose metabolic process2.07E-03
45GO:0006636: unsaturated fatty acid biosynthetic process2.23E-03
46GO:2000377: regulation of reactive oxygen species metabolic process2.39E-03
47GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.60E-03
48GO:0010118: stomatal movement3.61E-03
49GO:0009741: response to brassinosteroid3.80E-03
50GO:0006970: response to osmotic stress3.84E-03
51GO:0048366: leaf development4.20E-03
52GO:0042742: defense response to bacterium4.30E-03
53GO:0030154: cell differentiation4.79E-03
54GO:0006904: vesicle docking involved in exocytosis5.21E-03
55GO:0001666: response to hypoxia5.64E-03
56GO:0009816: defense response to bacterium, incompatible interaction5.86E-03
57GO:0009627: systemic acquired resistance6.09E-03
58GO:0010119: regulation of stomatal movement7.49E-03
59GO:0006357: regulation of transcription from RNA polymerase II promoter8.61E-03
60GO:0006887: exocytosis9.01E-03
61GO:0042542: response to hydrogen peroxide9.27E-03
62GO:0006855: drug transmembrane transport1.06E-02
63GO:0009738: abscisic acid-activated signaling pathway1.12E-02
64GO:0009611: response to wounding1.18E-02
65GO:0009585: red, far-red light phototransduction1.18E-02
66GO:0045893: positive regulation of transcription, DNA-templated1.33E-02
67GO:0009845: seed germination1.87E-02
68GO:0006633: fatty acid biosynthetic process2.08E-02
69GO:0007623: circadian rhythm2.22E-02
70GO:0071555: cell wall organization2.35E-02
71GO:0009739: response to gibberellin2.41E-02
72GO:0009733: response to auxin2.64E-02
73GO:0009658: chloroplast organization3.04E-02
74GO:0009409: response to cold3.18E-02
75GO:0009723: response to ethylene3.37E-02
76GO:0080167: response to karrikin3.54E-02
77GO:0046777: protein autophosphorylation3.71E-02
78GO:0006952: defense response3.74E-02
79GO:0045454: cell redox homeostasis4.02E-02
80GO:0006629: lipid metabolic process4.67E-02
81GO:0007165: signal transduction4.86E-02
RankGO TermAdjusted P value
1GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
2GO:0047890: flavanone 4-reductase activity0.00E+00
3GO:0003700: transcription factor activity, sequence-specific DNA binding4.06E-06
4GO:1901149: salicylic acid binding4.04E-05
5GO:0080132: fatty acid alpha-hydroxylase activity4.04E-05
6GO:0090440: abscisic acid transporter activity4.04E-05
7GO:0004328: formamidase activity4.04E-05
8GO:0001047: core promoter binding1.00E-04
9GO:0044390: ubiquitin-like protein conjugating enzyme binding1.00E-04
10GO:0043565: sequence-specific DNA binding1.04E-04
11GO:0052692: raffinose alpha-galactosidase activity1.73E-04
12GO:0016762: xyloglucan:xyloglucosyl transferase activity2.42E-04
13GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides2.55E-04
14GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity3.43E-04
15GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway3.43E-04
16GO:0016798: hydrolase activity, acting on glycosyl bonds4.15E-04
17GO:0080046: quercetin 4'-O-glucosyltransferase activity5.37E-04
18GO:0044212: transcription regulatory region DNA binding7.59E-04
19GO:0031625: ubiquitin protein ligase binding1.07E-03
20GO:0003712: transcription cofactor activity2.07E-03
21GO:0003714: transcription corepressor activity2.39E-03
22GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.50E-03
23GO:0035251: UDP-glucosyltransferase activity2.72E-03
24GO:0004402: histone acetyltransferase activity3.61E-03
25GO:0001085: RNA polymerase II transcription factor binding3.80E-03
26GO:0043531: ADP binding3.91E-03
27GO:0050662: coenzyme binding3.99E-03
28GO:0003677: DNA binding4.30E-03
29GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting5.28E-03
30GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding5.87E-03
31GO:0009931: calcium-dependent protein serine/threonine kinase activity6.09E-03
32GO:0004806: triglyceride lipase activity6.31E-03
33GO:0004842: ubiquitin-protein transferase activity6.48E-03
34GO:0015238: drug transmembrane transporter activity7.01E-03
35GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding7.49E-03
36GO:0080043: quercetin 3-O-glucosyltransferase activity1.41E-02
37GO:0080044: quercetin 7-O-glucosyltransferase activity1.41E-02
38GO:0016746: transferase activity, transferring acyl groups1.54E-02
39GO:0005515: protein binding1.74E-02
40GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.94E-02
41GO:0015297: antiporter activity2.15E-02
42GO:0008194: UDP-glycosyltransferase activity2.41E-02
43GO:0003824: catalytic activity2.58E-02
44GO:0042802: identical protein binding2.64E-02
45GO:0003682: chromatin binding3.16E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0042406: extrinsic component of endoplasmic reticulum membrane1.73E-04
3GO:0036513: Derlin-1 retrotranslocation complex2.55E-04
4GO:0019005: SCF ubiquitin ligase complex4.58E-04
5GO:0005615: extracellular space2.60E-03
6GO:0005634: nucleus3.25E-03
7GO:0005770: late endosome3.80E-03
8GO:0000145: exocyst4.58E-03
9GO:0048046: apoplast5.31E-03
10GO:0005667: transcription factor complex6.09E-03
11GO:0031902: late endosome membrane9.01E-03
12GO:0005618: cell wall2.46E-02
13GO:0009505: plant-type cell wall2.94E-02
Gene type



Gene DE type