Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G62240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048575: short-day photoperiodism, flowering8.33E-06
2GO:0009755: hormone-mediated signaling pathway1.91E-05
3GO:0010100: negative regulation of photomorphogenesis6.80E-05
4GO:0010204: defense response signaling pathway, resistance gene-independent6.80E-05
5GO:0009870: defense response signaling pathway, resistance gene-dependent9.94E-05
6GO:0006281: DNA repair1.29E-04
7GO:0010182: sugar mediated signaling pathway2.97E-04
8GO:0010154: fruit development2.97E-04
9GO:0048825: cotyledon development3.27E-04
10GO:0016579: protein deubiquitination4.20E-04
11GO:0045087: innate immune response6.05E-04
12GO:0009640: photomorphogenesis7.13E-04
13GO:0000209: protein polyubiquitination7.31E-04
14GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process8.05E-04
15GO:0006417: regulation of translation9.20E-04
16GO:0048367: shoot system development9.79E-04
17GO:0006396: RNA processing1.10E-03
18GO:0008380: RNA splicing1.73E-03
19GO:0007049: cell cycle2.22E-03
20GO:0048366: leaf development2.30E-03
21GO:0006397: mRNA processing3.18E-03
22GO:0006357: regulation of transcription from RNA polymerase II promoter3.74E-03
23GO:0009908: flower development4.26E-03
24GO:0009738: abscisic acid-activated signaling pathway4.47E-03
25GO:0006511: ubiquitin-dependent protein catabolic process5.64E-03
26GO:0042742: defense response to bacterium7.44E-03
27GO:0030154: cell differentiation7.90E-03
28GO:0050832: defense response to fungus1.60E-02
RankGO TermAdjusted P value
1GO:0003730: mRNA 3'-UTR binding4.09E-05
2GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.11E-04
3GO:0003723: RNA binding3.33E-04
4GO:0004843: thiol-dependent ubiquitin-specific protease activity3.42E-04
5GO:0031625: ubiquitin protein ligase binding9.20E-04
6GO:0005515: protein binding1.56E-03
7GO:0008233: peptidase activity2.35E-03
8GO:0061630: ubiquitin protein ligase activity2.46E-03
9GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.69E-03
10GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.89E-03
11GO:0000166: nucleotide binding4.57E-03
12GO:0044212: transcription regulatory region DNA binding7.44E-03
13GO:0004842: ubiquitin-protein transferase activity9.33E-03
14GO:0003729: mRNA binding9.83E-03
15GO:0043565: sequence-specific DNA binding2.37E-02
RankGO TermAdjusted P value
1GO:0080008: Cul4-RING E3 ubiquitin ligase complex7.27E-05
2GO:0031307: integral component of mitochondrial outer membrane1.22E-04
3GO:0000151: ubiquitin ligase complex5.20E-04
4GO:0031966: mitochondrial membrane8.25E-04
5GO:0005681: spliceosomal complex9.59E-04
6GO:0005634: nucleus3.78E-03
7GO:0005829: cytosol2.62E-02
8GO:0005737: cytoplasm4.30E-02
Gene type



Gene DE type