GO Enrichment Analysis of Co-expressed Genes with
AT3G61860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway | 5.43E-06 |
| 2 | GO:0042539: hypotonic salinity response | 5.43E-06 |
| 3 | GO:0034243: regulation of transcription elongation from RNA polymerase II promoter | 1.49E-05 |
| 4 | GO:0032786: positive regulation of DNA-templated transcription, elongation | 2.75E-05 |
| 5 | GO:0007112: male meiosis cytokinesis | 5.99E-05 |
| 6 | GO:0043248: proteasome assembly | 9.99E-05 |
| 7 | GO:0000911: cytokinesis by cell plate formation | 1.22E-04 |
| 8 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 1.22E-04 |
| 9 | GO:0010016: shoot system morphogenesis | 1.22E-04 |
| 10 | GO:0009861: jasmonic acid and ethylene-dependent systemic resistance | 1.22E-04 |
| 11 | GO:0006333: chromatin assembly or disassembly | 1.46E-04 |
| 12 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.70E-04 |
| 13 | GO:0006972: hyperosmotic response | 1.96E-04 |
| 14 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 2.49E-04 |
| 15 | GO:0006325: chromatin organization | 2.77E-04 |
| 16 | GO:0006406: mRNA export from nucleus | 4.90E-04 |
| 17 | GO:0043622: cortical microtubule organization | 5.23E-04 |
| 18 | GO:0010090: trichome morphogenesis | 9.50E-04 |
| 19 | GO:0016579: protein deubiquitination | 1.07E-03 |
| 20 | GO:0000724: double-strand break repair via homologous recombination | 1.49E-03 |
| 21 | GO:0042546: cell wall biogenesis | 1.86E-03 |
| 22 | GO:0009965: leaf morphogenesis | 1.96E-03 |
| 23 | GO:0010224: response to UV-B | 2.27E-03 |
| 24 | GO:0048367: shoot system development | 2.53E-03 |
| 25 | GO:0009620: response to fungus | 2.64E-03 |
| 26 | GO:0016569: covalent chromatin modification | 2.70E-03 |
| 27 | GO:0010468: regulation of gene expression | 4.58E-03 |
| 28 | GO:0016310: phosphorylation | 4.87E-03 |
| 29 | GO:0009826: unidimensional cell growth | 5.34E-03 |
| 30 | GO:0042254: ribosome biogenesis | 5.55E-03 |
| 31 | GO:0007049: cell cycle | 5.91E-03 |
| 32 | GO:0048366: leaf development | 6.13E-03 |
| 33 | GO:0006351: transcription, DNA-templated | 6.95E-03 |
| 34 | GO:0006281: DNA repair | 8.33E-03 |
| 35 | GO:0006397: mRNA processing | 8.58E-03 |
| 36 | GO:0009908: flower development | 1.16E-02 |
| 37 | GO:0009555: pollen development | 1.25E-02 |
| 38 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.55E-02 |
| 39 | GO:0006414: translational elongation | 1.66E-02 |
| 40 | GO:0030154: cell differentiation | 2.19E-02 |
| 41 | GO:0015031: protein transport | 2.44E-02 |
| 42 | GO:0009409: response to cold | 2.56E-02 |
| 43 | GO:0007165: signal transduction | 3.48E-02 |
| 44 | GO:0009737: response to abscisic acid | 3.54E-02 |
| 45 | GO:0009651: response to salt stress | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 1.49E-05 |
| 2 | GO:0030527: structural constituent of chromatin | 4.27E-05 |
| 3 | GO:0000993: RNA polymerase II core binding | 5.99E-05 |
| 4 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 9.99E-05 |
| 5 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.22E-04 |
| 6 | GO:0001055: RNA polymerase II activity | 2.49E-04 |
| 7 | GO:0001054: RNA polymerase I activity | 3.06E-04 |
| 8 | GO:0004129: cytochrome-c oxidase activity | 3.06E-04 |
| 9 | GO:0001056: RNA polymerase III activity | 3.35E-04 |
| 10 | GO:0031418: L-ascorbic acid binding | 4.90E-04 |
| 11 | GO:0004707: MAP kinase activity | 5.55E-04 |
| 12 | GO:0003727: single-stranded RNA binding | 6.58E-04 |
| 13 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 8.75E-04 |
| 14 | GO:0005515: protein binding | 1.20E-03 |
| 15 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.53E-03 |
| 16 | GO:0003746: translation elongation factor activity | 1.53E-03 |
| 17 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.21E-03 |
| 18 | GO:0003729: mRNA binding | 2.97E-03 |
| 19 | GO:0003682: chromatin binding | 5.69E-03 |
| 20 | GO:0003924: GTPase activity | 8.33E-03 |
| 21 | GO:0005525: GTP binding | 1.78E-02 |
| 22 | GO:0005509: calcium ion binding | 1.94E-02 |
| 23 | GO:0005506: iron ion binding | 2.04E-02 |
| 24 | GO:0003824: catalytic activity | 2.20E-02 |
| 25 | GO:0004672: protein kinase activity | 2.71E-02 |
| 26 | GO:0016301: kinase activity | 3.36E-02 |
| 27 | GO:0003735: structural constituent of ribosome | 3.37E-02 |
| 28 | GO:0003677: DNA binding | 3.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032044: DSIF complex | 5.43E-06 |
| 2 | GO:0005746: mitochondrial respiratory chain | 7.90E-05 |
| 3 | GO:0005736: DNA-directed RNA polymerase I complex | 2.22E-04 |
| 4 | GO:0005666: DNA-directed RNA polymerase III complex | 2.49E-04 |
| 5 | GO:0000418: DNA-directed RNA polymerase IV complex | 2.77E-04 |
| 6 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.06E-04 |
| 7 | GO:0005829: cytosol | 3.30E-04 |
| 8 | GO:0005665: DNA-directed RNA polymerase II, core complex | 3.35E-04 |
| 9 | GO:0005730: nucleolus | 3.58E-04 |
| 10 | GO:0000419: DNA-directed RNA polymerase V complex | 4.58E-04 |
| 11 | GO:0009504: cell plate | 8.38E-04 |
| 12 | GO:0000785: chromatin | 9.12E-04 |
| 13 | GO:0000502: proteasome complex | 2.21E-03 |
| 14 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.97E-03 |
| 15 | GO:0022627: cytosolic small ribosomal subunit | 4.92E-03 |
| 16 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.84E-03 |
| 17 | GO:0005874: microtubule | 6.20E-03 |
| 18 | GO:0005622: intracellular | 1.88E-02 |
| 19 | GO:0005768: endosome | 1.91E-02 |
| 20 | GO:0005634: nucleus | 2.04E-02 |
| 21 | GO:0005840: ribosome | 2.13E-02 |
| 22 | GO:0005789: endoplasmic reticulum membrane | 2.79E-02 |
| 23 | GO:0005794: Golgi apparatus | 3.58E-02 |
| 24 | GO:0005737: cytoplasm | 3.92E-02 |