co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G61570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010203: response to very low fluence red light stimulus	0.00E+00
2	GO:0015812: gamma-aminobutyric acid transport	1.04E-05
3	GO:0032958: inositol phosphate biosynthetic process	1.04E-05
4	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.04E-05
5	GO:0051170: nuclear import	2.78E-05
6	GO:0017006: protein-tetrapyrrole linkage	5.03E-05
7	GO:0090153: regulation of sphingolipid biosynthetic process	5.03E-05
8	GO:0072661: protein targeting to plasma membrane	5.03E-05
9	GO:0006020: inositol metabolic process	7.70E-05
10	GO:0009584: detection of visible light	7.70E-05
11	GO:0044211: CTP salvage	7.70E-05
12	GO:0010218: response to far red light	8.81E-05
13	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.07E-04
14	GO:0051365: cellular response to potassium ion starvation	1.07E-04
15	GO:0044206: UMP salvage	1.07E-04
16	GO:0009640: photomorphogenesis	1.36E-04
17	GO:0043097: pyrimidine nucleoside salvage	1.40E-04
18	GO:0006206: pyrimidine nucleobase metabolic process	1.74E-04
19	GO:0017148: negative regulation of translation	2.11E-04
20	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.11E-04
21	GO:0010161: red light signaling pathway	2.50E-04
22	GO:0009827: plant-type cell wall modification	3.32E-04
23	GO:0001510: RNA methylation	3.32E-04
24	GO:0046685: response to arsenic-containing substance	3.74E-04
25	GO:0009638: phototropism	4.18E-04
26	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.18E-04
27	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	6.04E-04
28	GO:0003333: amino acid transmembrane transport	9.11E-04
29	GO:0048511: rhythmic process	9.11E-04
30	GO:0061077: chaperone-mediated protein folding	9.11E-04
31	GO:0019748: secondary metabolic process	9.65E-04
32	GO:0045892: negative regulation of transcription, DNA-templated	1.04E-03
33	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.13E-03
34	GO:0010118: stomatal movement	1.19E-03
35	GO:0009630: gravitropism	1.50E-03
36	GO:1901657: glycosyl compound metabolic process	1.56E-03
37	GO:0016126: sterol biosynthetic process	1.83E-03
38	GO:0010029: regulation of seed germination	1.90E-03
39	GO:0006950: response to stress	2.04E-03
40	GO:0009738: abscisic acid-activated signaling pathway	2.11E-03
41	GO:0018298: protein-chromophore linkage	2.19E-03
42	GO:0009817: defense response to fungus, incompatible interaction	2.19E-03
43	GO:0000160: phosphorelay signal transduction system	2.26E-03
44	GO:0010114: response to red light	3.04E-03
45	GO:0000209: protein polyubiquitination	3.12E-03
46	GO:0008643: carbohydrate transport	3.20E-03
47	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.46E-03
48	GO:0009585: red, far-red light phototransduction	3.72E-03
49	GO:0009058: biosynthetic process	5.72E-03
50	GO:0009409: response to cold	5.89E-03
51	GO:0006413: translational initiation	6.56E-03
52	GO:0005975: carbohydrate metabolic process	6.60E-03
53	GO:0007623: circadian rhythm	6.89E-03
54	GO:0009739: response to gibberellin	7.45E-03
55	GO:0009737: response to abscisic acid	9.27E-03
56	GO:0006970: response to osmotic stress	9.84E-03
57	GO:0009723: response to ethylene	1.03E-02
58	GO:0009408: response to heat	1.43E-02
59	GO:0009651: response to salt stress	1.46E-02
60	GO:0009555: pollen development	2.15E-02
61	GO:0035556: intracellular signal transduction	2.24E-02
62	GO:0006351: transcription, DNA-templated	2.42E-02
63	GO:0006468: protein phosphorylation	3.39E-02
64	GO:0009414: response to water deprivation	3.50E-02
65	GO:0042742: defense response to bacterium	3.56E-02
66	GO:0006979: response to oxidative stress	3.58E-02

Rank	GO Term	Adjusted P value
1	GO:0080082: esculin beta-glucosidase activity	0.00E+00
2	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
3	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
4	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
5	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
6	GO:0004567: beta-mannosidase activity	0.00E+00
7	GO:0004421: hydroxymethylglutaryl-CoA synthase activity	0.00E+00
8	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.04E-05
9	GO:0008158: hedgehog receptor activity	1.04E-05
10	GO:0031516: far-red light photoreceptor activity	1.04E-05
11	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.04E-05
12	GO:0000829: inositol heptakisphosphate kinase activity	1.04E-05
13	GO:0080079: cellobiose glucosidase activity	1.04E-05
14	GO:0000828: inositol hexakisphosphate kinase activity	1.04E-05
15	GO:0015180: L-alanine transmembrane transporter activity	2.78E-05
16	GO:0009883: red or far-red light photoreceptor activity	2.78E-05
17	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.78E-05
18	GO:0008020: G-protein coupled photoreceptor activity	5.03E-05
19	GO:0015189: L-lysine transmembrane transporter activity	7.70E-05
20	GO:0015181: arginine transmembrane transporter activity	7.70E-05
21	GO:0004845: uracil phosphoribosyltransferase activity	1.07E-04
22	GO:0005313: L-glutamate transmembrane transporter activity	1.07E-04
23	GO:0004849: uridine kinase activity	2.11E-04
24	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.74E-04
25	GO:0004673: protein histidine kinase activity	4.63E-04
26	GO:0000155: phosphorelay sensor kinase activity	6.04E-04
27	GO:0004565: beta-galactosidase activity	6.04E-04
28	GO:0031624: ubiquitin conjugating enzyme binding	6.53E-04
29	GO:0004672: protein kinase activity	8.27E-04
30	GO:0042803: protein homodimerization activity	1.07E-03
31	GO:0000156: phosphorelay response regulator activity	1.56E-03
32	GO:0102483: scopolin beta-glucosidase activity	2.04E-03
33	GO:0008422: beta-glucosidase activity	2.72E-03
34	GO:0004185: serine-type carboxypeptidase activity	3.04E-03
35	GO:0005525: GTP binding	3.55E-03
36	GO:0015171: amino acid transmembrane transporter activity	3.98E-03
37	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.26E-03
38	GO:0015297: antiporter activity	6.67E-03
39	GO:0003743: translation initiation factor activity	7.68E-03
40	GO:0042802: identical protein binding	8.14E-03
41	GO:0008168: methyltransferase activity	9.10E-03
42	GO:0061630: ubiquitin protein ligase activity	1.13E-02
43	GO:0004871: signal transducer activity	1.27E-02
44	GO:0016301: kinase activity	1.78E-02
45	GO:0004674: protein serine/threonine kinase activity	2.15E-02
46	GO:0005515: protein binding	2.23E-02
47	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.62E-02
48	GO:0003729: mRNA binding	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0005851: eukaryotic translation initiation factor 2B complex	1.74E-04
2	GO:0005623: cell	3.47E-04
3	GO:0016604: nuclear body	4.18E-04
4	GO:0000151: ubiquitin ligase complex	2.19E-03
5	GO:0009506: plasmodesma	2.73E-03
6	GO:0031966: mitochondrial membrane	3.54E-03
7	GO:0005622: intracellular	3.83E-03
8	GO:0016607: nuclear speck	4.26E-03
9	GO:0005886: plasma membrane	4.95E-03
10	GO:0005618: cell wall	1.73E-02
11	GO:0005887: integral component of plasma membrane	1.78E-02
12	GO:0022626: cytosolic ribosome	2.08E-02
13	GO:0005737: cytoplasm	2.53E-02
14	GO:0009505: plant-type cell wall	4.18E-02
15	GO:0005789: endoplasmic reticulum membrane	4.81E-02