co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G61480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly	0.00E+00
2	GO:0046473: phosphatidic acid metabolic process	0.00E+00
3	GO:0000042: protein targeting to Golgi	0.00E+00
4	GO:0043631: RNA polyadenylation	5.97E-09
5	GO:0006378: mRNA polyadenylation	2.86E-06
6	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	7.90E-05
7	GO:0033962: cytoplasmic mRNA processing body assembly	1.59E-04
8	GO:0017148: negative regulation of translation	1.59E-04
9	GO:0046470: phosphatidylcholine metabolic process	1.88E-04
10	GO:0009699: phenylpropanoid biosynthetic process	2.52E-04
11	GO:0048193: Golgi vesicle transport	2.52E-04
12	GO:0090333: regulation of stomatal closure	2.85E-04
13	GO:0012501: programmed cell death	4.26E-04
14	GO:0006071: glycerol metabolic process	5.80E-04
15	GO:0007131: reciprocal meiotic recombination	7.45E-04
16	GO:0030433: ubiquitin-dependent ERAD pathway	7.45E-04
17	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.75E-04
18	GO:0009911: positive regulation of flower development	1.40E-03
19	GO:0009813: flavonoid biosynthetic process	1.72E-03
20	GO:0006499: N-terminal protein myristoylation	1.78E-03
21	GO:0009637: response to blue light	1.95E-03
22	GO:0000209: protein polyubiquitination	2.38E-03
23	GO:0009742: brassinosteroid mediated signaling pathway	3.73E-03
24	GO:0040008: regulation of growth	5.04E-03
25	GO:0007166: cell surface receptor signaling pathway	5.71E-03
26	GO:0016310: phosphorylation	7.06E-03
27	GO:0016192: vesicle-mediated transport	8.47E-03
28	GO:0006886: intracellular protein transport	9.48E-03
29	GO:0016042: lipid catabolic process	1.05E-02
30	GO:0006397: mRNA processing	1.11E-02
31	GO:0009409: response to cold	3.31E-02
32	GO:0007275: multicellular organism development	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0004652: polynucleotide adenylyltransferase activity	5.78E-08
2	GO:0034450: ubiquitin-ubiquitin ligase activity	7.41E-06
3	GO:0004371: glycerone kinase activity	7.41E-06
4	GO:0016779: nucleotidyltransferase activity	1.06E-05
5	GO:0004103: choline kinase activity	2.00E-05
6	GO:0004630: phospholipase D activity	2.52E-04
7	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.52E-04
8	GO:0043424: protein histidine kinase binding	6.61E-04
9	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.07E-03
10	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.23E-03
11	GO:0003723: RNA binding	3.92E-03
12	GO:0008565: protein transporter activity	4.72E-03
13	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.96E-03
14	GO:0042803: protein homodimerization activity	9.58E-03
15	GO:0005515: protein binding	1.04E-02
16	GO:0016301: kinase activity	1.04E-02
17	GO:0000166: nucleotide binding	1.61E-02
18	GO:0005524: ATP binding	2.31E-02
19	GO:0005509: calcium ion binding	2.52E-02
20	GO:0046983: protein dimerization activity	3.28E-02
21	GO:0003729: mRNA binding	3.54E-02

Rank	GO Term	Adjusted P value
1	GO:0030124: AP-4 adaptor complex	3.67E-05
2	GO:0015630: microtubule cytoskeleton	5.65E-05
3	GO:0000795: synaptonemal complex	1.04E-04
4	GO:0030131: clathrin adaptor complex	2.20E-04
5	GO:0030665: clathrin-coated vesicle membrane	3.19E-04
6	GO:0000932: P-body	1.40E-03
7	GO:0000151: ubiquitin ligase complex	1.67E-03
8	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	7.50E-03
9	GO:0005794: Golgi apparatus	1.13E-02
10	GO:0005802: trans-Golgi network	2.26E-02
11	GO:0005737: cytoplasm	2.80E-02
12	GO:0005886: plasma membrane	4.97E-02