Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G61180

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1904962: plastid to vacuole vesicle-mediated transport0.00E+00
2GO:0071211: protein targeting to vacuole involved in autophagy0.00E+00
3GO:0015970: guanosine tetraphosphate biosynthetic process0.00E+00
4GO:0080065: 4-alpha-methyl-delta7-sterol oxidation2.30E-05
5GO:0080173: male-female gamete recognition during double fertilization2.30E-05
6GO:0015846: polyamine transport2.12E-04
7GO:0016123: xanthophyll biosynthetic process2.73E-04
8GO:0000060: protein import into nucleus, translocation3.37E-04
9GO:0010077: maintenance of inflorescence meristem identity4.04E-04
10GO:0070413: trehalose metabolism in response to stress5.46E-04
11GO:0010099: regulation of photomorphogenesis6.21E-04
12GO:0009827: plant-type cell wall modification6.21E-04
13GO:0008356: asymmetric cell division7.77E-04
14GO:0048354: mucilage biosynthetic process involved in seed coat development7.77E-04
15GO:0009688: abscisic acid biosynthetic process8.59E-04
16GO:0009641: shade avoidance8.59E-04
17GO:0009718: anthocyanin-containing compound biosynthetic process1.12E-03
18GO:0005992: trehalose biosynthetic process1.49E-03
19GO:0003333: amino acid transmembrane transport1.70E-03
20GO:0009723: response to ethylene2.05E-03
21GO:0010182: sugar mediated signaling pathway2.36E-03
22GO:0009567: double fertilization forming a zygote and endosperm3.09E-03
23GO:0006629: lipid metabolic process3.21E-03
24GO:0009408: response to heat3.21E-03
25GO:0016126: sterol biosynthetic process3.48E-03
26GO:0009911: positive regulation of flower development3.48E-03
27GO:0015995: chlorophyll biosynthetic process3.89E-03
28GO:0010114: response to red light5.84E-03
29GO:0000165: MAPK cascade6.66E-03
30GO:0009909: regulation of flower development7.70E-03
31GO:0009553: embryo sac development8.98E-03
32GO:0006413: translational initiation1.28E-02
33GO:0007623: circadian rhythm1.35E-02
34GO:0010150: leaf senescence1.35E-02
35GO:0006351: transcription, DNA-templated1.35E-02
36GO:0009739: response to gibberellin1.46E-02
37GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.74E-02
38GO:0009658: chloroplast organization1.84E-02
39GO:0006970: response to osmotic stress1.94E-02
40GO:0007049: cell cycle1.99E-02
41GO:0080167: response to karrikin2.14E-02
42GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.19E-02
43GO:0046777: protein autophosphorylation2.25E-02
44GO:0044550: secondary metabolite biosynthetic process2.27E-02
45GO:0015979: photosynthesis2.35E-02
46GO:0032259: methylation2.74E-02
47GO:0016310: phosphorylation2.83E-02
48GO:0048364: root development2.91E-02
49GO:0006355: regulation of transcription, DNA-templated2.94E-02
50GO:0009651: response to salt stress3.86E-02
51GO:0009908: flower development3.96E-02
52GO:0009416: response to light stimulus4.25E-02
53GO:0051301: cell division4.52E-02
54GO:0045893: positive regulation of transcription, DNA-templated4.69E-02
RankGO TermAdjusted P value
1GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
2GO:0008728: GTP diphosphokinase activity5.89E-05
3GO:0000254: C-4 methylsterol oxidase activity1.55E-04
4GO:0015203: polyamine transmembrane transporter activity1.55E-04
5GO:0031625: ubiquitin protein ligase binding5.47E-04
6GO:0000989: transcription factor activity, transcription factor binding6.98E-04
7GO:0071949: FAD binding6.98E-04
8GO:0015174: basic amino acid transmembrane transporter activity7.77E-04
9GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity8.59E-04
10GO:0047372: acylglycerol lipase activity9.42E-04
11GO:0004022: alcohol dehydrogenase (NAD) activity1.12E-03
12GO:0004565: beta-galactosidase activity1.12E-03
13GO:0008134: transcription factor binding1.49E-03
14GO:0016791: phosphatase activity3.09E-03
15GO:0003700: transcription factor activity, sequence-specific DNA binding4.19E-03
16GO:0015293: symporter activity6.33E-03
17GO:0016298: lipase activity7.35E-03
18GO:0008270: zinc ion binding9.99E-03
19GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.18E-02
20GO:0015297: antiporter activity1.30E-02
21GO:0003743: translation initiation factor activity1.50E-02
22GO:0004842: ubiquitin-protein transferase activity1.59E-02
23GO:0008168: methyltransferase activity1.79E-02
24GO:0061630: ubiquitin protein ligase activity2.22E-02
25GO:0016787: hydrolase activity2.47E-02
26GO:0004519: endonuclease activity3.00E-02
27GO:0008289: lipid binding3.58E-02
RankGO TermAdjusted P value
1GO:0031969: chloroplast membrane2.19E-03
2GO:0000151: ubiquitin ligase complex4.17E-03
3GO:0016607: nuclear speck8.24E-03
4GO:0005623: cell1.09E-02
5GO:0005634: nucleus1.09E-02
6GO:0005789: endoplasmic reticulum membrane1.76E-02
7GO:0043231: intracellular membrane-bounded organelle3.03E-02
8GO:0005887: integral component of plasma membrane3.51E-02
9GO:0005829: cytosol4.17E-02
10GO:0005618: cell wall4.55E-02
Gene type



Gene DE type