GO Enrichment Analysis of Co-expressed Genes with
AT3G60860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048867: stem cell fate determination | 0.00E+00 |
| 2 | GO:0060213: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | 0.00E+00 |
| 3 | GO:0000390: spliceosomal complex disassembly | 0.00E+00 |
| 4 | GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic | 1.04E-05 |
| 5 | GO:0045948: positive regulation of translational initiation | 2.78E-05 |
| 6 | GO:0006751: glutathione catabolic process | 1.74E-04 |
| 7 | GO:0006875: cellular metal ion homeostasis | 2.90E-04 |
| 8 | GO:0006367: transcription initiation from RNA polymerase II promoter | 3.32E-04 |
| 9 | GO:0009932: cell tip growth | 3.32E-04 |
| 10 | GO:0010629: negative regulation of gene expression | 4.63E-04 |
| 11 | GO:0006913: nucleocytoplasmic transport | 5.09E-04 |
| 12 | GO:0010152: pollen maturation | 5.55E-04 |
| 13 | GO:0010102: lateral root morphogenesis | 6.04E-04 |
| 14 | GO:0006446: regulation of translational initiation | 6.53E-04 |
| 15 | GO:0010073: meristem maintenance | 8.59E-04 |
| 16 | GO:0006874: cellular calcium ion homeostasis | 8.59E-04 |
| 17 | GO:0006886: intracellular protein transport | 1.05E-03 |
| 18 | GO:0010089: xylem development | 1.08E-03 |
| 19 | GO:0010051: xylem and phloem pattern formation | 1.19E-03 |
| 20 | GO:0042752: regulation of circadian rhythm | 1.31E-03 |
| 21 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.44E-03 |
| 22 | GO:0071805: potassium ion transmembrane transport | 1.70E-03 |
| 23 | GO:0016579: protein deubiquitination | 1.76E-03 |
| 24 | GO:0048573: photoperiodism, flowering | 2.04E-03 |
| 25 | GO:0009846: pollen germination | 3.54E-03 |
| 26 | GO:0006813: potassium ion transport | 3.72E-03 |
| 27 | GO:0006417: regulation of translation | 3.98E-03 |
| 28 | GO:0009742: brassinosteroid mediated signaling pathway | 4.92E-03 |
| 29 | GO:0000398: mRNA splicing, via spliceosome | 5.22E-03 |
| 30 | GO:0009790: embryo development | 6.14E-03 |
| 31 | GO:0016036: cellular response to phosphate starvation | 6.56E-03 |
| 32 | GO:0006413: translational initiation | 6.56E-03 |
| 33 | GO:0009826: unidimensional cell growth | 9.10E-03 |
| 34 | GO:0006970: response to osmotic stress | 9.84E-03 |
| 35 | GO:0006355: regulation of transcription, DNA-templated | 1.38E-02 |
| 36 | GO:0009651: response to salt stress | 1.46E-02 |
| 37 | GO:0006351: transcription, DNA-templated | 2.42E-02 |
| 38 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.68E-02 |
| 39 | GO:0006979: response to oxidative stress | 3.58E-02 |
| 40 | GO:0015031: protein transport | 4.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990446: U1 snRNP binding | 0.00E+00 |
| 2 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 3 | GO:0019829: cation-transporting ATPase activity | 5.03E-05 |
| 4 | GO:0031369: translation initiation factor binding | 1.74E-04 |
| 5 | GO:0003730: mRNA 3'-UTR binding | 2.11E-04 |
| 6 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 2.11E-04 |
| 7 | GO:0019888: protein phosphatase regulator activity | 6.04E-04 |
| 8 | GO:0005388: calcium-transporting ATPase activity | 6.04E-04 |
| 9 | GO:0015079: potassium ion transmembrane transporter activity | 8.59E-04 |
| 10 | GO:0004176: ATP-dependent peptidase activity | 9.11E-04 |
| 11 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 9.11E-04 |
| 12 | GO:0003727: single-stranded RNA binding | 1.08E-03 |
| 13 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 1.44E-03 |
| 14 | GO:0008237: metallopeptidase activity | 1.70E-03 |
| 15 | GO:0005096: GTPase activator activity | 2.26E-03 |
| 16 | GO:0004222: metalloendopeptidase activity | 2.33E-03 |
| 17 | GO:0003697: single-stranded DNA binding | 2.56E-03 |
| 18 | GO:0043621: protein self-association | 3.20E-03 |
| 19 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.72E-03 |
| 20 | GO:0003690: double-stranded DNA binding | 3.81E-03 |
| 21 | GO:0008026: ATP-dependent helicase activity | 4.92E-03 |
| 22 | GO:0008565: protein transporter activity | 6.24E-03 |
| 23 | GO:0003729: mRNA binding | 6.47E-03 |
| 24 | GO:0003723: RNA binding | 6.71E-03 |
| 25 | GO:0003743: translation initiation factor activity | 7.68E-03 |
| 26 | GO:0016887: ATPase activity | 1.95E-02 |
| 27 | GO:0005515: protein binding | 2.23E-02 |
| 28 | GO:0005525: GTP binding | 3.07E-02 |
| 29 | GO:0005524: ATP binding | 4.35E-02 |
| 30 | GO:0046983: protein dimerization activity | 4.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071008: U2-type post-mRNA release spliceosomal complex | 0.00E+00 |
| 2 | GO:0031981: nuclear lumen | 0.00E+00 |
| 3 | GO:0016363: nuclear matrix | 2.11E-04 |
| 4 | GO:0000159: protein phosphatase type 2A complex | 5.09E-04 |
| 5 | GO:0005665: DNA-directed RNA polymerase II, core complex | 5.55E-04 |
| 6 | GO:0005795: Golgi stack | 7.02E-04 |
| 7 | GO:0031965: nuclear membrane | 1.37E-03 |
| 8 | GO:0000932: P-body | 1.83E-03 |
| 9 | GO:0005819: spindle | 2.72E-03 |
| 10 | GO:0031902: late endosome membrane | 2.88E-03 |
| 11 | GO:0005622: intracellular | 3.83E-03 |
| 12 | GO:0005635: nuclear envelope | 3.89E-03 |
| 13 | GO:0009524: phragmoplast | 5.72E-03 |
| 14 | GO:0005783: endoplasmic reticulum | 5.83E-03 |
| 15 | GO:0005789: endoplasmic reticulum membrane | 6.64E-03 |
| 16 | GO:0005774: vacuolar membrane | 1.51E-02 |
| 17 | GO:0005887: integral component of plasma membrane | 1.78E-02 |
| 18 | GO:0005777: peroxisome | 2.37E-02 |
| 19 | GO:0005829: cytosol | 2.61E-02 |
| 20 | GO:0005634: nucleus | 2.63E-02 |
| 21 | GO:0000139: Golgi membrane | 4.42E-02 |