Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G60770

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044843: cell cycle G1/S phase transition0.00E+00
2GO:0006412: translation1.20E-49
3GO:0042254: ribosome biogenesis3.89E-12
4GO:0009735: response to cytokinin1.17E-08
5GO:0000027: ribosomal large subunit assembly6.75E-07
6GO:0042274: ribosomal small subunit biogenesis1.24E-06
7GO:0009955: adaxial/abaxial pattern specification4.83E-06
8GO:0006407: rRNA export from nucleus3.12E-05
9GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.12E-05
10GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.12E-05
11GO:0006364: rRNA processing3.79E-05
12GO:0009220: pyrimidine ribonucleotide biosynthetic process7.88E-05
13GO:0048569: post-embryonic animal organ development7.88E-05
14GO:0009967: positive regulation of signal transduction7.88E-05
15GO:0040007: growth9.66E-05
16GO:1902626: assembly of large subunit precursor of preribosome1.37E-04
17GO:0042256: mature ribosome assembly1.37E-04
18GO:0044205: 'de novo' UMP biosynthetic process2.76E-04
19GO:0071493: cellular response to UV-B3.53E-04
20GO:0000470: maturation of LSU-rRNA4.34E-04
21GO:0009651: response to salt stress5.89E-04
22GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process6.07E-04
23GO:0000028: ribosomal small subunit assembly6.99E-04
24GO:0001558: regulation of cell growth7.94E-04
25GO:0006352: DNA-templated transcription, initiation1.20E-03
26GO:0010015: root morphogenesis1.20E-03
27GO:0006913: nucleocytoplasmic transport1.20E-03
28GO:0010229: inflorescence development1.43E-03
29GO:0048467: gynoecium development1.55E-03
30GO:0051302: regulation of cell division2.05E-03
31GO:0071215: cellular response to abscisic acid stimulus2.46E-03
32GO:0006520: cellular amino acid metabolic process3.05E-03
33GO:0009791: post-embryonic development3.36E-03
34GO:0032502: developmental process3.68E-03
35GO:0009409: response to cold4.16E-03
36GO:0010043: response to zinc ion5.99E-03
37GO:0009734: auxin-activated signaling pathway6.61E-03
38GO:0009908: flower development7.52E-03
39GO:0009640: photomorphogenesis7.60E-03
40GO:0008283: cell proliferation7.60E-03
41GO:0009965: leaf morphogenesis8.24E-03
42GO:0048367: shoot system development1.08E-02
43GO:0006414: translational elongation1.24E-02
44GO:0009845: seed germination1.49E-02
45GO:0006413: translational initiation1.68E-02
46GO:0016036: cellular response to phosphate starvation1.68E-02
47GO:0006970: response to osmotic stress2.54E-02
48GO:0048364: root development3.82E-02
49GO:0009793: embryo development ending in seed dormancy3.91E-02
RankGO TermAdjusted P value
1GO:0004070: aspartate carbamoyltransferase activity0.00E+00
2GO:0003735: structural constituent of ribosome1.40E-56
3GO:0003729: mRNA binding2.44E-22
4GO:0030371: translation repressor activity3.12E-05
5GO:0005078: MAP-kinase scaffold activity7.88E-05
6GO:0016743: carboxyl- or carbamoyltransferase activity7.88E-05
7GO:0008097: 5S rRNA binding2.04E-04
8GO:0008235: metalloexopeptidase activity6.07E-04
9GO:0003723: RNA binding2.57E-03
10GO:0016597: amino acid binding4.34E-03
11GO:0000166: nucleotide binding8.33E-03
12GO:0003743: translation initiation factor activity1.97E-02
13GO:0004871: signal transducer activity3.30E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome6.16E-54
2GO:0022625: cytosolic large ribosomal subunit4.65E-39
3GO:0005840: ribosome2.25E-29
4GO:0005730: nucleolus1.80E-25
5GO:0005829: cytosol4.97E-19
6GO:0022627: cytosolic small ribosomal subunit2.60E-18
7GO:0015934: large ribosomal subunit7.18E-16
8GO:0009506: plasmodesma2.51E-13
9GO:0016020: membrane2.89E-13
10GO:0005737: cytoplasm1.34E-09
11GO:0005774: vacuolar membrane1.24E-05
12GO:0009507: chloroplast3.08E-05
13GO:0030686: 90S preribosome3.12E-05
14GO:0005773: vacuole4.45E-05
15GO:0015935: small ribosomal subunit7.90E-05
16GO:0005886: plasma membrane1.36E-04
17GO:0031597: cytosolic proteasome complex5.20E-04
18GO:0005618: cell wall7.90E-04
19GO:0005742: mitochondrial outer membrane translocase complex7.94E-04
20GO:0008180: COP9 signalosome8.92E-04
21GO:0005852: eukaryotic translation initiation factor 3 complex1.20E-03
22GO:0030529: intracellular ribonucleoprotein complex4.52E-03
23GO:0005834: heterotrimeric G-protein complex1.10E-02
24GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.57E-02
Gene type



Gene DE type