GO Enrichment Analysis of Co-expressed Genes with
AT3G59040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 7.41E-06 |
| 2 | GO:0018026: peptidyl-lysine monomethylation | 2.00E-05 |
| 3 | GO:0006568: tryptophan metabolic process | 2.00E-05 |
| 4 | GO:0042780: tRNA 3'-end processing | 3.67E-05 |
| 5 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 3.67E-05 |
| 6 | GO:0010031: circumnutation | 5.65E-05 |
| 7 | GO:0051781: positive regulation of cell division | 7.90E-05 |
| 8 | GO:0009793: embryo development ending in seed dormancy | 8.73E-05 |
| 9 | GO:0042793: transcription from plastid promoter | 1.30E-04 |
| 10 | GO:0032544: plastid translation | 2.52E-04 |
| 11 | GO:0010015: root morphogenesis | 3.90E-04 |
| 12 | GO:0010027: thylakoid membrane organization | 1.40E-03 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 1.56E-03 |
| 14 | GO:0006457: protein folding | 1.87E-03 |
| 15 | GO:0006364: rRNA processing | 2.82E-03 |
| 16 | GO:0048316: seed development | 3.23E-03 |
| 17 | GO:0009451: RNA modification | 5.29E-03 |
| 18 | GO:0009658: chloroplast organization | 7.04E-03 |
| 19 | GO:0015979: photosynthesis | 8.97E-03 |
| 20 | GO:0032259: methylation | 1.04E-02 |
| 21 | GO:0008152: metabolic process | 1.15E-02 |
| 22 | GO:0009735: response to cytokinin | 1.51E-02 |
| 23 | GO:0009416: response to light stimulus | 1.61E-02 |
| 24 | GO:0009409: response to cold | 3.31E-02 |
| 25 | GO:0009737: response to abscisic acid | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 2 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 7.41E-06 |
| 3 | GO:0051087: chaperone binding | 8.37E-06 |
| 4 | GO:0000774: adenyl-nucleotide exchange factor activity | 2.00E-05 |
| 5 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 3.67E-05 |
| 6 | GO:0016851: magnesium chelatase activity | 5.65E-05 |
| 7 | GO:0016279: protein-lysine N-methyltransferase activity | 7.90E-05 |
| 8 | GO:0042803: protein homodimerization activity | 7.24E-04 |
| 9 | GO:0010181: FMN binding | 1.01E-03 |
| 10 | GO:0005507: copper ion binding | 2.05E-03 |
| 11 | GO:0051082: unfolded protein binding | 3.59E-03 |
| 12 | GO:0003723: RNA binding | 3.92E-03 |
| 13 | GO:0019843: rRNA binding | 4.18E-03 |
| 14 | GO:0008168: methyltransferase activity | 6.86E-03 |
| 15 | GO:0004519: endonuclease activity | 1.14E-02 |
| 16 | GO:0016887: ATPase activity | 1.46E-02 |
| 17 | GO:0003824: catalytic activity | 2.85E-02 |
| 18 | GO:0016491: oxidoreductase activity | 3.25E-02 |
| 19 | GO:0016787: hydrolase activity | 4.59E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.18E-08 |
| 2 | GO:0009570: chloroplast stroma | 3.62E-06 |
| 3 | GO:0009508: plastid chromosome | 4.08E-06 |
| 4 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.00E-05 |
| 5 | GO:0009295: nucleoid | 3.12E-05 |
| 6 | GO:0010007: magnesium chelatase complex | 3.67E-05 |
| 7 | GO:0005759: mitochondrial matrix | 2.81E-04 |
| 8 | GO:0009534: chloroplast thylakoid | 1.75E-03 |
| 9 | GO:0005874: microtubule | 7.98E-03 |
| 10 | GO:0043231: intracellular membrane-bounded organelle | 1.15E-02 |
| 11 | GO:0009579: thylakoid | 1.83E-02 |
| 12 | GO:0005802: trans-Golgi network | 2.26E-02 |
| 13 | GO:0005768: endosome | 2.47E-02 |
| 14 | GO:0009536: plastid | 3.08E-02 |
| 15 | GO:0000139: Golgi membrane | 3.31E-02 |