Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G58120

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901698: response to nitrogen compound0.00E+00
2GO:0009932: cell tip growth4.32E-06
3GO:0010442: guard cell morphogenesis1.67E-05
4GO:0042547: cell wall modification involved in multidimensional cell growth1.67E-05
5GO:0071258: cellular response to gravity4.35E-05
6GO:0052541: plant-type cell wall cellulose metabolic process4.35E-05
7GO:0071705: nitrogen compound transport7.77E-05
8GO:0010583: response to cyclopentenone7.90E-05
9GO:0032502: developmental process7.90E-05
10GO:2000038: regulation of stomatal complex development1.61E-04
11GO:0071249: cellular response to nitrate1.61E-04
12GO:0032876: negative regulation of DNA endoreduplication2.09E-04
13GO:0030308: negative regulation of cell growth2.09E-04
14GO:2000037: regulation of stomatal complex patterning3.11E-04
15GO:0009690: cytokinin metabolic process4.23E-04
16GO:0007155: cell adhesion4.23E-04
17GO:0009416: response to light stimulus4.41E-04
18GO:0009742: brassinosteroid mediated signaling pathway5.04E-04
19GO:0000902: cell morphogenesis5.42E-04
20GO:0009641: shade avoidance6.68E-04
21GO:0048765: root hair cell differentiation7.34E-04
22GO:0000038: very long-chain fatty acid metabolic process7.34E-04
23GO:0015706: nitrate transport8.01E-04
24GO:0008361: regulation of cell size8.01E-04
25GO:0010053: root epidermal cell differentiation1.01E-03
26GO:0010167: response to nitrate1.01E-03
27GO:0006071: glycerol metabolic process1.08E-03
28GO:0010026: trichome differentiation1.23E-03
29GO:0009814: defense response, incompatible interaction1.39E-03
30GO:0006284: base-excision repair1.56E-03
31GO:0042631: cellular response to water deprivation1.73E-03
32GO:0000226: microtubule cytoskeleton organization1.73E-03
33GO:0042335: cuticle development1.73E-03
34GO:0045892: negative regulation of transcription, DNA-templated1.81E-03
35GO:0010305: leaf vascular tissue pattern formation1.82E-03
36GO:0071554: cell wall organization or biogenesis2.09E-03
37GO:0007264: small GTPase mediated signal transduction2.18E-03
38GO:0010090: trichome morphogenesis2.28E-03
39GO:0009734: auxin-activated signaling pathway3.05E-03
40GO:0010119: regulation of stomatal movement3.53E-03
41GO:0006417: regulation of translation5.88E-03
42GO:0042744: hydrogen peroxide catabolic process8.94E-03
43GO:0006633: fatty acid biosynthetic process9.58E-03
44GO:0040008: regulation of growth9.91E-03
45GO:0007623: circadian rhythm1.02E-02
46GO:0045490: pectin catabolic process1.02E-02
47GO:0007166: cell surface receptor signaling pathway1.12E-02
48GO:0006970: response to osmotic stress1.47E-02
49GO:0009860: pollen tube growth1.47E-02
50GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.66E-02
51GO:0046777: protein autophosphorylation1.70E-02
52GO:0045454: cell redox homeostasis1.84E-02
53GO:0006629: lipid metabolic process2.14E-02
54GO:0006281: DNA repair2.14E-02
55GO:0009555: pollen development3.22E-02
56GO:0045893: positive regulation of transcription, DNA-templated3.55E-02
RankGO TermAdjusted P value
1GO:0008725: DNA-3-methyladenine glycosylase activity2.09E-04
2GO:0008889: glycerophosphodiester phosphodiesterase activity5.42E-04
3GO:0003712: transcription cofactor activity1.01E-03
4GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.08E-03
5GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.08E-03
6GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.08E-03
7GO:0030570: pectate lyase activity1.47E-03
8GO:0005200: structural constituent of cytoskeleton2.48E-03
9GO:0016722: oxidoreductase activity, oxidizing metal ions2.48E-03
10GO:0016413: O-acetyltransferase activity2.57E-03
11GO:0016829: lyase activity8.63E-03
12GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding8.94E-03
13GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.74E-03
14GO:0004601: peroxidase activity1.39E-02
15GO:0042803: protein homodimerization activity1.91E-02
16GO:0004871: signal transducer activity1.91E-02
17GO:0003924: GTPase activity2.14E-02
18GO:0016301: kinase activity3.69E-02
19GO:0004674: protein serine/threonine kinase activity3.82E-02
20GO:0043565: sequence-specific DNA binding3.97E-02
21GO:0005507: copper ion binding4.14E-02
22GO:0005525: GTP binding4.59E-02
RankGO TermAdjusted P value
1GO:0046658: anchored component of plasma membrane6.97E-05
2GO:0045298: tubulin complex5.42E-04
3GO:0031225: anchored component of membrane7.68E-04
4GO:0009505: plant-type cell wall1.40E-03
5GO:0005886: plasma membrane3.16E-03
6GO:0005774: vacuolar membrane2.69E-02
7GO:0048046: apoplast2.83E-02
8GO:0005634: nucleus2.91E-02
9GO:0005618: cell wall3.08E-02
10GO:0005576: extracellular region3.84E-02
11GO:0005773: vacuole4.12E-02
12GO:0005622: intracellular4.85E-02
Gene type



Gene DE type