GO Enrichment Analysis of Co-expressed Genes with
AT3G56170
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 2 | GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase | 0.00E+00 |
| 3 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 4 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 5 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 6 | GO:0009966: regulation of signal transduction | 2.88E-05 |
| 7 | GO:0015760: glucose-6-phosphate transport | 2.88E-05 |
| 8 | GO:0030198: extracellular matrix organization | 2.88E-05 |
| 9 | GO:0019395: fatty acid oxidation | 7.28E-05 |
| 10 | GO:0050684: regulation of mRNA processing | 7.28E-05 |
| 11 | GO:0015714: phosphoenolpyruvate transport | 1.27E-04 |
| 12 | GO:0032784: regulation of DNA-templated transcription, elongation | 1.27E-04 |
| 13 | GO:0035436: triose phosphate transmembrane transport | 1.27E-04 |
| 14 | GO:0015713: phosphoglycerate transport | 2.57E-04 |
| 15 | GO:0033320: UDP-D-xylose biosynthetic process | 2.57E-04 |
| 16 | GO:0006656: phosphatidylcholine biosynthetic process | 3.30E-04 |
| 17 | GO:0098719: sodium ion import across plasma membrane | 3.30E-04 |
| 18 | GO:0006014: D-ribose metabolic process | 4.06E-04 |
| 19 | GO:0042732: D-xylose metabolic process | 4.06E-04 |
| 20 | GO:0034389: lipid particle organization | 4.86E-04 |
| 21 | GO:0000209: protein polyubiquitination | 5.06E-04 |
| 22 | GO:0006333: chromatin assembly or disassembly | 5.68E-04 |
| 23 | GO:0006491: N-glycan processing | 6.55E-04 |
| 24 | GO:0030091: protein repair | 6.55E-04 |
| 25 | GO:0006972: hyperosmotic response | 7.44E-04 |
| 26 | GO:0048193: Golgi vesicle transport | 7.44E-04 |
| 27 | GO:0009051: pentose-phosphate shunt, oxidative branch | 8.35E-04 |
| 28 | GO:0051453: regulation of intracellular pH | 9.29E-04 |
| 29 | GO:0010152: pollen maturation | 1.23E-03 |
| 30 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 1.34E-03 |
| 31 | GO:0006006: glucose metabolic process | 1.34E-03 |
| 32 | GO:0010102: lateral root morphogenesis | 1.34E-03 |
| 33 | GO:0007033: vacuole organization | 1.56E-03 |
| 34 | GO:0009225: nucleotide-sugar metabolic process | 1.56E-03 |
| 35 | GO:0006406: mRNA export from nucleus | 1.79E-03 |
| 36 | GO:0009695: jasmonic acid biosynthetic process | 1.92E-03 |
| 37 | GO:0031408: oxylipin biosynthetic process | 2.04E-03 |
| 38 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.17E-03 |
| 39 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.57E-03 |
| 40 | GO:0006814: sodium ion transport | 2.99E-03 |
| 41 | GO:0019252: starch biosynthetic process | 3.13E-03 |
| 42 | GO:0006891: intra-Golgi vesicle-mediated transport | 3.28E-03 |
| 43 | GO:0006635: fatty acid beta-oxidation | 3.28E-03 |
| 44 | GO:0006464: cellular protein modification process | 3.73E-03 |
| 45 | GO:0071805: potassium ion transmembrane transport | 3.89E-03 |
| 46 | GO:0009631: cold acclimation | 5.58E-03 |
| 47 | GO:0016051: carbohydrate biosynthetic process | 5.94E-03 |
| 48 | GO:0034599: cellular response to oxidative stress | 6.13E-03 |
| 49 | GO:0006897: endocytosis | 6.69E-03 |
| 50 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 8.09E-03 |
| 51 | GO:0006486: protein glycosylation | 8.71E-03 |
| 52 | GO:0010224: response to UV-B | 8.92E-03 |
| 53 | GO:0009553: embryo sac development | 1.09E-02 |
| 54 | GO:0009624: response to nematode | 1.12E-02 |
| 55 | GO:0009742: brassinosteroid mediated signaling pathway | 1.16E-02 |
| 56 | GO:0000398: mRNA splicing, via spliceosome | 1.23E-02 |
| 57 | GO:0009058: biosynthetic process | 1.36E-02 |
| 58 | GO:0006633: fatty acid biosynthetic process | 1.54E-02 |
| 59 | GO:0009409: response to cold | 2.07E-02 |
| 60 | GO:0006970: response to osmotic stress | 2.36E-02 |
| 61 | GO:0046686: response to cadmium ion | 2.38E-02 |
| 62 | GO:0006886: intracellular protein transport | 3.04E-02 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 3.53E-02 |
| 64 | GO:0048364: root development | 3.55E-02 |
| 65 | GO:0009734: auxin-activated signaling pathway | 4.40E-02 |
| 66 | GO:0006508: proteolysis | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070191: methionine-R-sulfoxide reductase activity | 0.00E+00 |
| 2 | GO:0000384: first spliceosomal transesterification activity | 0.00E+00 |
| 3 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 4 | GO:0005201: extracellular matrix structural constituent | 0.00E+00 |
| 5 | GO:0004180: carboxypeptidase activity | 2.27E-07 |
| 6 | GO:0034450: ubiquitin-ubiquitin ligase activity | 2.88E-05 |
| 7 | GO:0004105: choline-phosphate cytidylyltransferase activity | 2.88E-05 |
| 8 | GO:0003988: acetyl-CoA C-acyltransferase activity | 7.28E-05 |
| 9 | GO:0015152: glucose-6-phosphate transmembrane transporter activity | 7.28E-05 |
| 10 | GO:0071917: triose-phosphate transmembrane transporter activity | 1.27E-04 |
| 11 | GO:0030527: structural constituent of chromatin | 1.89E-04 |
| 12 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 1.89E-04 |
| 13 | GO:0015120: phosphoglycerate transmembrane transporter activity | 2.57E-04 |
| 14 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.57E-04 |
| 15 | GO:0008236: serine-type peptidase activity | 2.85E-04 |
| 16 | GO:0048040: UDP-glucuronate decarboxylase activity | 4.06E-04 |
| 17 | GO:0004559: alpha-mannosidase activity | 4.86E-04 |
| 18 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 4.86E-04 |
| 19 | GO:0070403: NAD+ binding | 4.86E-04 |
| 20 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 4.86E-04 |
| 21 | GO:0004747: ribokinase activity | 4.86E-04 |
| 22 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 6.55E-04 |
| 23 | GO:0008865: fructokinase activity | 6.55E-04 |
| 24 | GO:0004713: protein tyrosine kinase activity | 1.03E-03 |
| 25 | GO:0015386: potassium:proton antiporter activity | 1.13E-03 |
| 26 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.34E-03 |
| 27 | GO:0019888: protein phosphatase regulator activity | 1.34E-03 |
| 28 | GO:0031624: ubiquitin conjugating enzyme binding | 1.45E-03 |
| 29 | GO:0015385: sodium:proton antiporter activity | 3.58E-03 |
| 30 | GO:0050897: cobalt ion binding | 5.58E-03 |
| 31 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 6.31E-03 |
| 32 | GO:0050661: NADP binding | 6.50E-03 |
| 33 | GO:0016874: ligase activity | 1.07E-02 |
| 34 | GO:0008565: protein transporter activity | 1.48E-02 |
| 35 | GO:0015297: antiporter activity | 1.59E-02 |
| 36 | GO:0016491: oxidoreductase activity | 2.01E-02 |
| 37 | GO:0003682: chromatin binding | 2.33E-02 |
| 38 | GO:0050660: flavin adenine dinucleotide binding | 2.48E-02 |
| 39 | GO:0061630: ubiquitin protein ligase activity | 2.71E-02 |
| 40 | GO:0009055: electron carrier activity | 3.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070274: RES complex | 0.00E+00 |
| 2 | GO:0000151: ubiquitin ligase complex | 3.00E-04 |
| 3 | GO:0030173: integral component of Golgi membrane | 4.86E-04 |
| 4 | GO:0009514: glyoxysome | 7.44E-04 |
| 5 | GO:0071011: precatalytic spliceosome | 9.29E-04 |
| 6 | GO:0030125: clathrin vesicle coat | 1.03E-03 |
| 7 | GO:0005686: U2 snRNP | 1.03E-03 |
| 8 | GO:0071013: catalytic step 2 spliceosome | 1.13E-03 |
| 9 | GO:0048471: perinuclear region of cytoplasm | 1.13E-03 |
| 10 | GO:0005783: endoplasmic reticulum | 1.75E-03 |
| 11 | GO:0005905: clathrin-coated pit | 2.04E-03 |
| 12 | GO:0005768: endosome | 2.18E-03 |
| 13 | GO:0000785: chromatin | 3.43E-03 |
| 14 | GO:0032580: Golgi cisterna membrane | 3.73E-03 |
| 15 | GO:0005635: nuclear envelope | 9.14E-03 |
| 16 | GO:0005829: cytosol | 9.40E-03 |
| 17 | GO:0016607: nuclear speck | 1.00E-02 |
| 18 | GO:0010008: endosome membrane | 1.00E-02 |
| 19 | GO:0005802: trans-Golgi network | 1.20E-02 |
| 20 | GO:0005654: nucleoplasm | 1.28E-02 |
| 21 | GO:0005759: mitochondrial matrix | 1.54E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 2.00E-02 |
| 23 | GO:0005773: vacuole | 2.06E-02 |
| 24 | GO:0000139: Golgi membrane | 2.07E-02 |
| 25 | GO:0005737: cytoplasm | 2.17E-02 |
| 26 | GO:0031969: chloroplast membrane | 2.61E-02 |
| 27 | GO:0016021: integral component of membrane | 4.76E-02 |