GO Enrichment Analysis of Co-expressed Genes with
AT3G56050
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042906: xanthine transport | 0.00E+00 |
| 2 | GO:0030327: prenylated protein catabolic process | 0.00E+00 |
| 3 | GO:0030328: prenylcysteine catabolic process | 0.00E+00 |
| 4 | GO:0009768: photosynthesis, light harvesting in photosystem I | 8.90E-17 |
| 5 | GO:0015979: photosynthesis | 6.03E-12 |
| 6 | GO:0018298: protein-chromophore linkage | 7.91E-10 |
| 7 | GO:0009645: response to low light intensity stimulus | 5.12E-06 |
| 8 | GO:0009769: photosynthesis, light harvesting in photosystem II | 5.12E-06 |
| 9 | GO:0009644: response to high light intensity | 1.90E-05 |
| 10 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 2.64E-05 |
| 11 | GO:0006475: internal protein amino acid acetylation | 2.64E-05 |
| 12 | GO:0006474: N-terminal protein amino acid acetylation | 2.64E-05 |
| 13 | GO:0017198: N-terminal peptidyl-serine acetylation | 2.64E-05 |
| 14 | GO:0015857: uracil transport | 6.72E-05 |
| 15 | GO:0015720: allantoin transport | 6.72E-05 |
| 16 | GO:1902448: positive regulation of shade avoidance | 1.18E-04 |
| 17 | GO:0071705: nitrogen compound transport | 1.18E-04 |
| 18 | GO:0045338: farnesyl diphosphate metabolic process | 1.76E-04 |
| 19 | GO:0009765: photosynthesis, light harvesting | 2.39E-04 |
| 20 | GO:0010600: regulation of auxin biosynthetic process | 2.39E-04 |
| 21 | GO:0010218: response to far red light | 2.97E-04 |
| 22 | GO:0009637: response to blue light | 3.42E-04 |
| 23 | GO:0009635: response to herbicide | 3.78E-04 |
| 24 | GO:0010114: response to red light | 4.38E-04 |
| 25 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 4.53E-04 |
| 26 | GO:0009409: response to cold | 5.23E-04 |
| 27 | GO:0010161: red light signaling pathway | 5.30E-04 |
| 28 | GO:0010196: nonphotochemical quenching | 5.30E-04 |
| 29 | GO:0009585: red, far-red light phototransduction | 5.85E-04 |
| 30 | GO:0009704: de-etiolation | 6.10E-04 |
| 31 | GO:0010928: regulation of auxin mediated signaling pathway | 6.10E-04 |
| 32 | GO:0010206: photosystem II repair | 7.80E-04 |
| 33 | GO:0009735: response to cytokinin | 8.09E-04 |
| 34 | GO:0030042: actin filament depolymerization | 8.68E-04 |
| 35 | GO:0010018: far-red light signaling pathway | 8.68E-04 |
| 36 | GO:0009416: response to light stimulus | 9.02E-04 |
| 37 | GO:0010162: seed dormancy process | 9.59E-04 |
| 38 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.05E-03 |
| 39 | GO:0009767: photosynthetic electron transport chain | 1.25E-03 |
| 40 | GO:0010207: photosystem II assembly | 1.35E-03 |
| 41 | GO:0007015: actin filament organization | 1.35E-03 |
| 42 | GO:0090351: seedling development | 1.45E-03 |
| 43 | GO:0042753: positive regulation of circadian rhythm | 1.56E-03 |
| 44 | GO:0010017: red or far-red light signaling pathway | 2.02E-03 |
| 45 | GO:0009651: response to salt stress | 2.04E-03 |
| 46 | GO:1901657: glycosyl compound metabolic process | 3.33E-03 |
| 47 | GO:0030163: protein catabolic process | 3.33E-03 |
| 48 | GO:0009639: response to red or far red light | 3.47E-03 |
| 49 | GO:0048573: photoperiodism, flowering | 4.37E-03 |
| 50 | GO:0048481: plant ovule development | 4.69E-03 |
| 51 | GO:0010119: regulation of stomatal movement | 5.18E-03 |
| 52 | GO:0007568: aging | 5.18E-03 |
| 53 | GO:0009631: cold acclimation | 5.18E-03 |
| 54 | GO:0016051: carbohydrate biosynthetic process | 5.52E-03 |
| 55 | GO:0009737: response to abscisic acid | 5.64E-03 |
| 56 | GO:0009640: photomorphogenesis | 6.57E-03 |
| 57 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.57E-02 |
| 58 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.65E-02 |
| 59 | GO:0046686: response to cadmium ion | 2.14E-02 |
| 60 | GO:0006970: response to osmotic stress | 2.19E-02 |
| 61 | GO:0080167: response to karrikin | 2.42E-02 |
| 62 | GO:0010200: response to chitin | 2.48E-02 |
| 63 | GO:0016567: protein ubiquitination | 4.16E-02 |
| 64 | GO:0009908: flower development | 4.47E-02 |
| 65 | GO:0009738: abscisic acid-activated signaling pathway | 4.69E-02 |
| 66 | GO:0035556: intracellular signal transduction | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001735: prenylcysteine oxidase activity | 0.00E+00 |
| 2 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 3 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 4 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 5 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 6 | GO:0042907: xanthine transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 8 | GO:0031409: pigment binding | 1.74E-14 |
| 9 | GO:0016168: chlorophyll binding | 2.68E-12 |
| 10 | GO:0080079: cellobiose glucosidase activity | 2.64E-05 |
| 11 | GO:1990189: peptide-serine-N-acetyltransferase activity | 2.64E-05 |
| 12 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 2.64E-05 |
| 13 | GO:0005274: allantoin uptake transmembrane transporter activity | 6.72E-05 |
| 14 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 6.72E-05 |
| 15 | GO:0015210: uracil transmembrane transporter activity | 2.39E-04 |
| 16 | GO:0005515: protein binding | 4.93E-04 |
| 17 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 7.80E-04 |
| 18 | GO:0046872: metal ion binding | 7.86E-04 |
| 19 | GO:0003712: transcription cofactor activity | 1.45E-03 |
| 20 | GO:0008080: N-acetyltransferase activity | 2.65E-03 |
| 21 | GO:0102483: scopolin beta-glucosidase activity | 4.37E-03 |
| 22 | GO:0008236: serine-type peptidase activity | 4.53E-03 |
| 23 | GO:0003993: acid phosphatase activity | 5.69E-03 |
| 24 | GO:0008422: beta-glucosidase activity | 5.86E-03 |
| 25 | GO:0005198: structural molecule activity | 7.12E-03 |
| 26 | GO:0003779: actin binding | 1.01E-02 |
| 27 | GO:0016746: transferase activity, transferring acyl groups | 1.06E-02 |
| 28 | GO:0016758: transferase activity, transferring hexosyl groups | 1.19E-02 |
| 29 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.23E-02 |
| 30 | GO:0004252: serine-type endopeptidase activity | 1.30E-02 |
| 31 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.82E-02 |
| 32 | GO:0004497: monooxygenase activity | 2.42E-02 |
| 33 | GO:0003677: DNA binding | 2.44E-02 |
| 34 | GO:0061630: ubiquitin protein ligase activity | 2.51E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030076: light-harvesting complex | 1.17E-14 |
| 2 | GO:0009579: thylakoid | 1.92E-13 |
| 3 | GO:0009534: chloroplast thylakoid | 2.02E-13 |
| 4 | GO:0009522: photosystem I | 3.86E-13 |
| 5 | GO:0010287: plastoglobule | 4.77E-12 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 5.08E-12 |
| 7 | GO:0009941: chloroplast envelope | 5.25E-09 |
| 8 | GO:0042651: thylakoid membrane | 5.55E-07 |
| 9 | GO:0009523: photosystem II | 2.12E-06 |
| 10 | GO:0009783: photosystem II antenna complex | 2.64E-05 |
| 11 | GO:0009507: chloroplast | 2.77E-05 |
| 12 | GO:0031415: NatA complex | 6.72E-05 |
| 13 | GO:0009517: PSII associated light-harvesting complex II | 2.39E-04 |
| 14 | GO:0031977: thylakoid lumen | 4.05E-04 |
| 15 | GO:0009533: chloroplast stromal thylakoid | 5.30E-04 |
| 16 | GO:0009538: photosystem I reaction center | 6.10E-04 |
| 17 | GO:0010494: cytoplasmic stress granule | 7.80E-04 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 1.01E-03 |
| 19 | GO:0005764: lysosome | 1.35E-03 |
| 20 | GO:0030095: chloroplast photosystem II | 1.35E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 1.78E-03 |
| 22 | GO:0015629: actin cytoskeleton | 2.14E-03 |
| 23 | GO:0019898: extrinsic component of membrane | 2.91E-03 |
| 24 | GO:0000932: P-body | 3.91E-03 |
| 25 | GO:0022626: cytosolic ribosome | 6.45E-03 |
| 26 | GO:0016021: integral component of membrane | 7.22E-03 |
| 27 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.22E-02 |
| 28 | GO:0016020: membrane | 4.76E-02 |