Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G55980

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035264: multicellular organism growth0.00E+00
2GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response0.00E+00
3GO:0010200: response to chitin7.70E-12
4GO:0009611: response to wounding1.39E-08
5GO:0050691: regulation of defense response to virus by host1.30E-05
6GO:0001944: vasculature development2.74E-05
7GO:0009693: ethylene biosynthetic process2.74E-05
8GO:0006465: signal peptide processing1.68E-04
9GO:0045927: positive regulation of growth1.68E-04
10GO:0010117: photoprotection1.68E-04
11GO:0009873: ethylene-activated signaling pathway1.91E-04
12GO:0031347: regulation of defense response2.21E-04
13GO:0009612: response to mechanical stimulus2.53E-04
14GO:0006644: phospholipid metabolic process3.46E-04
15GO:0045893: positive regulation of transcription, DNA-templated3.51E-04
16GO:0010120: camalexin biosynthetic process3.94E-04
17GO:0009835: fruit ripening4.45E-04
18GO:0051865: protein autoubiquitination4.45E-04
19GO:0010150: leaf senescence5.99E-04
20GO:0002237: response to molecule of bacterial origin7.72E-04
21GO:0006952: defense response1.12E-03
22GO:0009814: defense response, incompatible interaction1.14E-03
23GO:0046777: protein autophosphorylation1.18E-03
24GO:0070417: cellular response to cold1.34E-03
25GO:0045892: negative regulation of transcription, DNA-templated1.34E-03
26GO:0009751: response to salicylic acid1.59E-03
27GO:0010193: response to ozone1.70E-03
28GO:0007165: signal transduction1.78E-03
29GO:0009737: response to abscisic acid1.83E-03
30GO:0071281: cellular response to iron ion1.86E-03
31GO:0009816: defense response to bacterium, incompatible interaction2.26E-03
32GO:0048573: photoperiodism, flowering2.43E-03
33GO:0051301: cell division3.07E-03
34GO:0006351: transcription, DNA-templated3.10E-03
35GO:0009651: response to salt stress3.24E-03
36GO:0042542: response to hydrogen peroxide3.53E-03
37GO:0000209: protein polyubiquitination3.73E-03
38GO:0009644: response to high light intensity3.82E-03
39GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.13E-03
40GO:0010224: response to UV-B4.55E-03
41GO:0009626: plant-type hypersensitive response5.20E-03
42GO:0009620: response to fungus5.32E-03
43GO:0009414: response to water deprivation5.54E-03
44GO:0006979: response to oxidative stress5.72E-03
45GO:0018105: peptidyl-serine phosphorylation5.77E-03
46GO:0006355: regulation of transcription, DNA-templated6.97E-03
47GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process8.93E-03
48GO:0009723: response to ethylene1.24E-02
49GO:0080167: response to karrikin1.31E-02
50GO:0015979: photosynthesis1.43E-02
51GO:0050832: defense response to fungus1.69E-02
52GO:0009753: response to jasmonic acid1.81E-02
53GO:0009738: abscisic acid-activated signaling pathway2.53E-02
54GO:0035556: intracellular signal transduction2.69E-02
55GO:0042742: defense response to bacterium4.29E-02
56GO:0009733: response to auxin4.65E-02
RankGO TermAdjusted P value
1GO:0004698: calcium-dependent protein kinase C activity0.00E+00
2GO:0030295: protein kinase activator activity1.30E-05
3GO:0008195: phosphatidate phosphatase activity2.53E-04
4GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity3.46E-04
5GO:0004708: MAP kinase kinase activity3.46E-04
6GO:0005509: calcium ion binding6.50E-04
7GO:0003700: transcription factor activity, sequence-specific DNA binding7.87E-04
8GO:0043531: ADP binding9.89E-04
9GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.02E-03
10GO:0004683: calmodulin-dependent protein kinase activity2.43E-03
11GO:0005515: protein binding3.77E-03
12GO:0043621: protein self-association3.82E-03
13GO:0043565: sequence-specific DNA binding5.53E-03
14GO:0044212: transcription regulatory region DNA binding5.68E-03
15GO:0030170: pyridoxal phosphate binding7.10E-03
16GO:0042802: identical protein binding9.77E-03
17GO:0061630: ubiquitin protein ligase activity1.35E-02
18GO:0004674: protein serine/threonine kinase activity2.81E-02
19GO:0005516: calmodulin binding3.47E-02
20GO:0008270: zinc ion binding4.16E-02
21GO:0003677: DNA binding4.38E-02
RankGO TermAdjusted P value
1GO:0031090: organelle membrane4.45E-04
2GO:0090406: pollen tube3.63E-03
3GO:0005887: integral component of plasma membrane2.14E-02
4GO:0031225: anchored component of membrane3.56E-02
5GO:0005737: cytoplasm4.59E-02
Gene type



Gene DE type