Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G55580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0050801: ion homeostasis5.43E-06
2GO:0090342: regulation of cell aging1.49E-05
3GO:0080141: regulation of jasmonic acid biosynthetic process2.75E-05
4GO:0010447: response to acidic pH2.75E-05
5GO:0009765: photosynthesis, light harvesting5.99E-05
6GO:0051205: protein insertion into membrane5.99E-05
7GO:0045038: protein import into chloroplast thylakoid membrane7.90E-05
8GO:0045926: negative regulation of growth1.22E-04
9GO:2000067: regulation of root morphogenesis1.22E-04
10GO:0009645: response to low light intensity stimulus1.46E-04
11GO:0009769: photosynthesis, light harvesting in photosystem II1.46E-04
12GO:0009819: drought recovery1.70E-04
13GO:0030148: sphingolipid biosynthetic process3.06E-04
14GO:0018107: peptidyl-threonine phosphorylation3.65E-04
15GO:0010039: response to iron ion4.26E-04
16GO:0009901: anther dehiscence4.26E-04
17GO:0015979: photosynthesis4.63E-04
18GO:0009768: photosynthesis, light harvesting in photosystem I5.23E-04
19GO:0009269: response to desiccation5.55E-04
20GO:0048443: stamen development6.58E-04
21GO:0070417: cellular response to cold6.93E-04
22GO:0000226: microtubule cytoskeleton organization7.29E-04
23GO:0055072: iron ion homeostasis8.38E-04
24GO:0010193: response to ozone8.75E-04
25GO:0010027: thylakoid membrane organization1.11E-03
26GO:0018298: protein-chromophore linkage1.31E-03
27GO:0010218: response to far red light1.40E-03
28GO:0006865: amino acid transport1.49E-03
29GO:0009637: response to blue light1.53E-03
30GO:0010114: response to red light1.81E-03
31GO:0009644: response to high light intensity1.91E-03
32GO:0010224: response to UV-B2.27E-03
33GO:0018105: peptidyl-serine phosphorylation2.86E-03
34GO:0007623: circadian rhythm4.06E-03
35GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.39E-03
36GO:0006470: protein dephosphorylation4.45E-03
37GO:0009860: pollen tube growth5.77E-03
38GO:0009723: response to ethylene6.06E-03
39GO:0080167: response to karrikin6.35E-03
40GO:0006869: lipid transport7.68E-03
41GO:0006629: lipid metabolic process8.33E-03
42GO:0009416: response to light stimulus1.25E-02
43GO:0009555: pollen development1.25E-02
44GO:0009611: response to wounding1.27E-02
45GO:0035556: intracellular signal transduction1.30E-02
46GO:0006979: response to oxidative stress2.07E-02
47GO:0009409: response to cold2.56E-02
48GO:0046686: response to cadmium ion2.83E-02
49GO:0009737: response to abscisic acid3.54E-02
50GO:0016567: protein ubiquitination4.56E-02
51GO:0006508: proteolysis4.59E-02
52GO:0009651: response to salt stress4.89E-02
RankGO TermAdjusted P value
1GO:0052631: sphingolipid delta-8 desaturase activity5.43E-06
2GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity5.43E-06
3GO:0004602: glutathione peroxidase activity1.22E-04
4GO:0004190: aspartic-type endopeptidase activity4.26E-04
5GO:0031409: pigment binding4.58E-04
6GO:0016168: chlorophyll binding1.15E-03
7GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.31E-03
8GO:0015171: amino acid transmembrane transporter activity2.37E-03
9GO:0008233: peptidase activity6.28E-03
10GO:0061630: ubiquitin protein ligase activity6.58E-03
11GO:0004722: protein serine/threonine phosphatase activity7.68E-03
12GO:0008289: lipid binding1.05E-02
13GO:0046872: metal ion binding1.72E-02
14GO:0016491: oxidoreductase activity2.51E-02
15GO:0004842: ubiquitin-protein transferase activity2.59E-02
RankGO TermAdjusted P value
1GO:0009535: chloroplast thylakoid membrane1.52E-06
2GO:0009517: PSII associated light-harvesting complex II5.99E-05
3GO:0030660: Golgi-associated vesicle membrane5.99E-05
4GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane5.99E-05
5GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane1.70E-04
6GO:0048226: Casparian strip1.70E-04
7GO:0009538: photosystem I reaction center1.70E-04
8GO:0005765: lysosomal membrane3.06E-04
9GO:0030095: chloroplast photosystem II3.96E-04
10GO:0030076: light-harvesting complex4.26E-04
11GO:0009522: photosystem I8.01E-04
12GO:0009507: chloroplast8.34E-04
13GO:0009523: photosystem II8.38E-04
14GO:0009579: thylakoid1.21E-03
15GO:0009534: chloroplast thylakoid1.22E-03
16GO:0009941: chloroplast envelope1.28E-03
17GO:0016021: integral component of membrane1.97E-03
18GO:0010008: endosome membrane2.53E-03
19GO:0010287: plastoglobule3.15E-03
20GO:0009543: chloroplast thylakoid lumen3.26E-03
21GO:0005768: endosome1.91E-02
22GO:0005789: endoplasmic reticulum membrane2.79E-02
Gene type



Gene DE type