GO Enrichment Analysis of Co-expressed Genes with
AT3G55510
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 2.30E-05 |
| 2 | GO:0000494: box C/D snoRNA 3'-end processing | 2.30E-05 |
| 3 | GO:1990258: histone glutamine methylation | 2.30E-05 |
| 4 | GO:0008535: respiratory chain complex IV assembly | 5.89E-05 |
| 5 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 5.89E-05 |
| 6 | GO:0070475: rRNA base methylation | 1.04E-04 |
| 7 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 1.55E-04 |
| 8 | GO:0007276: gamete generation | 1.55E-04 |
| 9 | GO:1900864: mitochondrial RNA modification | 2.12E-04 |
| 10 | GO:0006461: protein complex assembly | 2.73E-04 |
| 11 | GO:0031167: rRNA methylation | 2.73E-04 |
| 12 | GO:0000470: maturation of LSU-rRNA | 3.37E-04 |
| 13 | GO:0000338: protein deneddylation | 4.74E-04 |
| 14 | GO:0006364: rRNA processing | 4.95E-04 |
| 15 | GO:0006972: hyperosmotic response | 6.21E-04 |
| 16 | GO:0001510: RNA methylation | 6.21E-04 |
| 17 | GO:1900865: chloroplast RNA modification | 7.77E-04 |
| 18 | GO:0010162: seed dormancy process | 8.59E-04 |
| 19 | GO:0009790: embryo development | 9.96E-04 |
| 20 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.49E-03 |
| 21 | GO:0051302: regulation of cell division | 1.59E-03 |
| 22 | GO:0009294: DNA mediated transformation | 1.91E-03 |
| 23 | GO:0008033: tRNA processing | 2.24E-03 |
| 24 | GO:0009646: response to absence of light | 2.48E-03 |
| 25 | GO:0045454: cell redox homeostasis | 2.62E-03 |
| 26 | GO:0006635: fatty acid beta-oxidation | 2.72E-03 |
| 27 | GO:0009407: toxin catabolic process | 4.46E-03 |
| 28 | GO:0006099: tricarboxylic acid cycle | 5.05E-03 |
| 29 | GO:0009640: photomorphogenesis | 5.84E-03 |
| 30 | GO:0000154: rRNA modification | 6.33E-03 |
| 31 | GO:0009636: response to toxic substance | 6.33E-03 |
| 32 | GO:0009585: red, far-red light phototransduction | 7.18E-03 |
| 33 | GO:0016569: covalent chromatin modification | 8.79E-03 |
| 34 | GO:0006396: RNA processing | 9.36E-03 |
| 35 | GO:0009451: RNA modification | 1.37E-02 |
| 36 | GO:0046686: response to cadmium ion | 1.79E-02 |
| 37 | GO:0042254: ribosome biogenesis | 1.86E-02 |
| 38 | GO:0080167: response to karrikin | 2.14E-02 |
| 39 | GO:0009793: embryo development ending in seed dormancy | 2.67E-02 |
| 40 | GO:0032259: methylation | 2.74E-02 |
| 41 | GO:0006351: transcription, DNA-templated | 3.85E-02 |
| 42 | GO:0051301: cell division | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 2 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 3 | GO:0030515: snoRNA binding | 4.09E-06 |
| 4 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 2.30E-05 |
| 5 | GO:1990259: histone-glutamine methyltransferase activity | 2.30E-05 |
| 6 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 5.89E-05 |
| 7 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 5.89E-05 |
| 8 | GO:0043021: ribonucleoprotein complex binding | 5.89E-05 |
| 9 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 5.89E-05 |
| 10 | GO:0008649: rRNA methyltransferase activity | 1.04E-04 |
| 11 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 3.37E-04 |
| 12 | GO:0043295: glutathione binding | 4.74E-04 |
| 13 | GO:0003678: DNA helicase activity | 6.98E-04 |
| 14 | GO:0008026: ATP-dependent helicase activity | 7.35E-04 |
| 15 | GO:0001054: RNA polymerase I activity | 9.42E-04 |
| 16 | GO:0005507: copper ion binding | 1.12E-03 |
| 17 | GO:0003723: RNA binding | 1.28E-03 |
| 18 | GO:0004407: histone deacetylase activity | 1.49E-03 |
| 19 | GO:0010181: FMN binding | 2.48E-03 |
| 20 | GO:0004004: ATP-dependent RNA helicase activity | 3.89E-03 |
| 21 | GO:0000166: nucleotide binding | 5.67E-03 |
| 22 | GO:0004364: glutathione transferase activity | 5.68E-03 |
| 23 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 7.18E-03 |
| 24 | GO:0015035: protein disulfide oxidoreductase activity | 9.36E-03 |
| 25 | GO:0004386: helicase activity | 9.75E-03 |
| 26 | GO:0019843: rRNA binding | 1.07E-02 |
| 27 | GO:0008168: methyltransferase activity | 1.79E-02 |
| 28 | GO:0005524: ATP binding | 2.88E-02 |
| 29 | GO:0009055: electron carrier activity | 2.97E-02 |
| 30 | GO:0004519: endonuclease activity | 3.00E-02 |
| 31 | GO:0003676: nucleic acid binding | 4.73E-02 |
| 32 | GO:0016740: transferase activity | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005730: nucleolus | 1.25E-08 |
| 2 | GO:0031428: box C/D snoRNP complex | 1.99E-06 |
| 3 | GO:0032040: small-subunit processome | 1.99E-05 |
| 4 | GO:0070545: PeBoW complex | 5.89E-05 |
| 5 | GO:0030687: preribosome, large subunit precursor | 4.74E-04 |
| 6 | GO:0008180: COP9 signalosome | 6.98E-04 |
| 7 | GO:0005736: DNA-directed RNA polymerase I complex | 6.98E-04 |
| 8 | GO:0015030: Cajal body | 7.77E-04 |
| 9 | GO:0016592: mediator complex | 2.84E-03 |
| 10 | GO:0005739: mitochondrion | 4.12E-03 |
| 11 | GO:0005834: heterotrimeric G-protein complex | 8.42E-03 |
| 12 | GO:0009706: chloroplast inner membrane | 9.17E-03 |
| 13 | GO:0005618: cell wall | 9.92E-03 |
| 14 | GO:0005759: mitochondrial matrix | 1.26E-02 |
| 15 | GO:0046658: anchored component of plasma membrane | 1.64E-02 |
| 16 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.96E-02 |
| 17 | GO:0005634: nucleus | 2.24E-02 |
| 18 | GO:0005743: mitochondrial inner membrane | 2.68E-02 |