Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G55005

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019284: L-methionine salvage from S-adenosylmethionine0.00E+00
2GO:0006642: triglyceride mobilization0.00E+00
3GO:0046166: glyceraldehyde-3-phosphate biosynthetic process4.83E-06
4GO:0019563: glycerol catabolic process2.46E-05
5GO:0032504: multicellular organism reproduction2.46E-05
6GO:0006557: S-adenosylmethioninamine biosynthetic process2.46E-05
7GO:0009152: purine ribonucleotide biosynthetic process3.83E-05
8GO:0046653: tetrahydrofolate metabolic process3.83E-05
9GO:0019509: L-methionine salvage from methylthioadenosine1.11E-04
10GO:0009451: RNA modification1.86E-04
11GO:0006094: gluconeogenesis3.33E-04
12GO:0019253: reductive pentose-phosphate cycle3.61E-04
13GO:0007010: cytoskeleton organization4.48E-04
14GO:0080022: primary root development6.67E-04
15GO:0010051: xylem and phloem pattern formation6.67E-04
16GO:0009832: plant-type cell wall biogenesis1.24E-03
17GO:0009853: photorespiration1.40E-03
18GO:0030001: metal ion transport1.53E-03
19GO:0051603: proteolysis involved in cellular protein catabolic process2.07E-03
20GO:0006096: glycolytic process2.26E-03
21GO:0009058: biosynthetic process3.09E-03
22GO:0009793: embryo development ending in seed dormancy4.00E-03
23GO:0009658: chloroplast organization4.99E-03
24GO:0015979: photosynthesis6.34E-03
25GO:0009735: response to cytokinin1.06E-02
26GO:0071555: cell wall organization1.87E-02
27GO:0006508: proteolysis4.17E-02
RankGO TermAdjusted P value
1GO:0046570: methylthioribulose 1-phosphate dehydratase activity0.00E+00
2GO:0043874: acireductone synthase activity0.00E+00
3GO:0004807: triose-phosphate isomerase activity4.83E-06
4GO:0016742: hydroxymethyl-, formyl- and related transferase activity2.46E-05
5GO:0008864: formyltetrahydrofolate deformylase activity2.46E-05
6GO:0004014: adenosylmethionine decarboxylase activity2.46E-05
7GO:0004519: endonuclease activity5.62E-04
8GO:0004185: serine-type carboxypeptidase activity1.66E-03
9GO:0008017: microtubule binding3.82E-03
10GO:0000287: magnesium ion binding4.92E-03
11GO:0003723: RNA binding1.35E-02
12GO:0005509: calcium ion binding1.76E-02
13GO:0016491: oxidoreductase activity2.27E-02
14GO:0016787: hydrolase activity3.22E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.27E-05
2GO:0009570: chloroplast stroma1.52E-05
3GO:0009579: thylakoid6.73E-05
4GO:0010005: cortical microtubule, transverse to long axis1.11E-04
5GO:0005875: microtubule associated complex4.19E-04
6GO:0009654: photosystem II oxygen evolving complex4.78E-04
7GO:0043231: intracellular membrane-bounded organelle5.68E-04
8GO:0019898: extrinsic component of membrane7.68E-04
9GO:0009534: chloroplast thylakoid1.07E-03
10GO:0005819: spindle1.49E-03
11GO:0031977: thylakoid lumen1.57E-03
12GO:0009543: chloroplast thylakoid lumen2.98E-03
13GO:0009524: phragmoplast3.09E-03
14GO:0009535: chloroplast thylakoid membrane3.87E-03
15GO:0009941: chloroplast envelope8.11E-03
16GO:0048046: apoplast4.70E-02
17GO:0005618: cell wall5.00E-02
Gene type



Gene DE type