GO Enrichment Analysis of Co-expressed Genes with
AT3G54400
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010430: fatty acid omega-oxidation | 0.00E+00 |
| 2 | GO:0071555: cell wall organization | 2.54E-07 |
| 3 | GO:0010411: xyloglucan metabolic process | 3.18E-06 |
| 4 | GO:0042546: cell wall biogenesis | 1.24E-05 |
| 5 | GO:0010583: response to cyclopentenone | 4.48E-05 |
| 6 | GO:0007267: cell-cell signaling | 5.99E-05 |
| 7 | GO:0071370: cellular response to gibberellin stimulus | 9.69E-05 |
| 8 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 2.28E-04 |
| 9 | GO:2000123: positive regulation of stomatal complex development | 2.28E-04 |
| 10 | GO:0006695: cholesterol biosynthetic process | 2.28E-04 |
| 11 | GO:0006650: glycerophospholipid metabolic process | 2.28E-04 |
| 12 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.67E-04 |
| 13 | GO:0009855: determination of bilateral symmetry | 5.46E-04 |
| 14 | GO:0051016: barbed-end actin filament capping | 5.46E-04 |
| 15 | GO:0000271: polysaccharide biosynthetic process | 5.67E-04 |
| 16 | GO:0045489: pectin biosynthetic process | 6.09E-04 |
| 17 | GO:2000122: negative regulation of stomatal complex development | 7.26E-04 |
| 18 | GO:2000038: regulation of stomatal complex development | 7.26E-04 |
| 19 | GO:0010037: response to carbon dioxide | 7.26E-04 |
| 20 | GO:0015976: carbon utilization | 7.26E-04 |
| 21 | GO:0006085: acetyl-CoA biosynthetic process | 7.26E-04 |
| 22 | GO:0006749: glutathione metabolic process | 7.26E-04 |
| 23 | GO:0071554: cell wall organization or biogenesis | 7.47E-04 |
| 24 | GO:0046785: microtubule polymerization | 9.17E-04 |
| 25 | GO:0010375: stomatal complex patterning | 9.17E-04 |
| 26 | GO:0010014: meristem initiation | 1.34E-03 |
| 27 | GO:0045926: negative regulation of growth | 1.34E-03 |
| 28 | GO:0009612: response to mechanical stimulus | 1.34E-03 |
| 29 | GO:0009554: megasporogenesis | 1.34E-03 |
| 30 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.34E-03 |
| 31 | GO:0009955: adaxial/abaxial pattern specification | 1.34E-03 |
| 32 | GO:0080060: integument development | 1.34E-03 |
| 33 | GO:0009645: response to low light intensity stimulus | 1.57E-03 |
| 34 | GO:0016051: carbohydrate biosynthetic process | 1.72E-03 |
| 35 | GO:0006402: mRNA catabolic process | 1.81E-03 |
| 36 | GO:0009690: cytokinin metabolic process | 1.81E-03 |
| 37 | GO:0045010: actin nucleation | 1.81E-03 |
| 38 | GO:0007155: cell adhesion | 1.81E-03 |
| 39 | GO:0009932: cell tip growth | 2.07E-03 |
| 40 | GO:0080167: response to karrikin | 2.25E-03 |
| 41 | GO:0033384: geranyl diphosphate biosynthetic process | 2.33E-03 |
| 42 | GO:0045337: farnesyl diphosphate biosynthetic process | 2.33E-03 |
| 43 | GO:0016573: histone acetylation | 2.61E-03 |
| 44 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 2.90E-03 |
| 45 | GO:0019684: photosynthesis, light reaction | 3.20E-03 |
| 46 | GO:0010072: primary shoot apical meristem specification | 3.20E-03 |
| 47 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.20E-03 |
| 48 | GO:0000038: very long-chain fatty acid metabolic process | 3.20E-03 |
| 49 | GO:0006790: sulfur compound metabolic process | 3.50E-03 |
| 50 | GO:2000028: regulation of photoperiodism, flowering | 3.82E-03 |
| 51 | GO:0030036: actin cytoskeleton organization | 3.82E-03 |
| 52 | GO:0050826: response to freezing | 3.82E-03 |
| 53 | GO:0009725: response to hormone | 3.82E-03 |
| 54 | GO:0009742: brassinosteroid mediated signaling pathway | 4.45E-03 |
| 55 | GO:0046854: phosphatidylinositol phosphorylation | 4.49E-03 |
| 56 | GO:0010167: response to nitrate | 4.49E-03 |
| 57 | GO:0005985: sucrose metabolic process | 4.49E-03 |
| 58 | GO:0006833: water transport | 4.83E-03 |
| 59 | GO:0009944: polarity specification of adaxial/abaxial axis | 5.19E-03 |
| 60 | GO:0006338: chromatin remodeling | 5.19E-03 |
| 61 | GO:0007017: microtubule-based process | 5.55E-03 |
| 62 | GO:0009294: DNA mediated transformation | 6.70E-03 |
| 63 | GO:0019722: calcium-mediated signaling | 7.10E-03 |
| 64 | GO:0080022: primary root development | 7.93E-03 |
| 65 | GO:0034220: ion transmembrane transport | 7.93E-03 |
| 66 | GO:0042335: cuticle development | 7.93E-03 |
| 67 | GO:0009741: response to brassinosteroid | 8.35E-03 |
| 68 | GO:0009617: response to bacterium | 8.64E-03 |
| 69 | GO:0008654: phospholipid biosynthetic process | 9.23E-03 |
| 70 | GO:0032502: developmental process | 1.01E-02 |
| 71 | GO:0010090: trichome morphogenesis | 1.06E-02 |
| 72 | GO:0016126: sterol biosynthetic process | 1.25E-02 |
| 73 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.30E-02 |
| 74 | GO:0042128: nitrate assimilation | 1.36E-02 |
| 75 | GO:0009407: toxin catabolic process | 1.62E-02 |
| 76 | GO:0010119: regulation of stomatal movement | 1.68E-02 |
| 77 | GO:0007568: aging | 1.68E-02 |
| 78 | GO:0009744: response to sucrose | 2.14E-02 |
| 79 | GO:0009636: response to toxic substance | 2.33E-02 |
| 80 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.72E-02 |
| 81 | GO:0009626: plant-type hypersensitive response | 3.12E-02 |
| 82 | GO:0042545: cell wall modification | 3.33E-02 |
| 83 | GO:0009553: embryo sac development | 3.33E-02 |
| 84 | GO:0006468: protein phosphorylation | 3.39E-02 |
| 85 | GO:0051726: regulation of cell cycle | 3.55E-02 |
| 86 | GO:0006633: fatty acid biosynthetic process | 4.70E-02 |
| 87 | GO:0040008: regulation of growth | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048307: ferredoxin-nitrite reductase activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0050421: nitrite reductase (NO-forming) activity | 0.00E+00 |
| 4 | GO:0047889: ferredoxin-nitrate reductase activity | 0.00E+00 |
| 5 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 9.58E-07 |
| 6 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.18E-06 |
| 7 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 5.99E-05 |
| 8 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 7.41E-05 |
| 9 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 9.69E-05 |
| 10 | GO:0008252: nucleotidase activity | 9.69E-05 |
| 11 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.28E-04 |
| 12 | GO:0046593: mandelonitrile lyase activity | 2.28E-04 |
| 13 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 4.10E-04 |
| 14 | GO:0005507: copper ion binding | 5.34E-04 |
| 15 | GO:0003878: ATP citrate synthase activity | 5.46E-04 |
| 16 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 5.46E-04 |
| 17 | GO:0016757: transferase activity, transferring glycosyl groups | 6.80E-04 |
| 18 | GO:0019901: protein kinase binding | 6.99E-04 |
| 19 | GO:0016759: cellulose synthase activity | 8.97E-04 |
| 20 | GO:0008374: O-acyltransferase activity | 9.17E-04 |
| 21 | GO:0016413: O-acetyltransferase activity | 1.00E-03 |
| 22 | GO:0051753: mannan synthase activity | 1.34E-03 |
| 23 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.34E-03 |
| 24 | GO:0016832: aldehyde-lyase activity | 1.34E-03 |
| 25 | GO:0004564: beta-fructofuranosidase activity | 1.81E-03 |
| 26 | GO:0004337: geranyltranstransferase activity | 2.33E-03 |
| 27 | GO:0004575: sucrose alpha-glucosidase activity | 2.61E-03 |
| 28 | GO:0004161: dimethylallyltranstransferase activity | 3.20E-03 |
| 29 | GO:0004089: carbonate dehydratase activity | 3.82E-03 |
| 30 | GO:0004650: polygalacturonase activity | 3.84E-03 |
| 31 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 4.83E-03 |
| 32 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 4.83E-03 |
| 33 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 4.83E-03 |
| 34 | GO:0016758: transferase activity, transferring hexosyl groups | 5.11E-03 |
| 35 | GO:0004872: receptor activity | 9.23E-03 |
| 36 | GO:0051015: actin filament binding | 1.06E-02 |
| 37 | GO:0005200: structural constituent of cytoskeleton | 1.16E-02 |
| 38 | GO:0015250: water channel activity | 1.25E-02 |
| 39 | GO:0004674: protein serine/threonine kinase activity | 1.59E-02 |
| 40 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.62E-02 |
| 41 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.68E-02 |
| 42 | GO:0003993: acid phosphatase activity | 1.85E-02 |
| 43 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.96E-02 |
| 44 | GO:0004364: glutathione transferase activity | 2.08E-02 |
| 45 | GO:0004185: serine-type carboxypeptidase activity | 2.14E-02 |
| 46 | GO:0009055: electron carrier activity | 2.21E-02 |
| 47 | GO:0045330: aspartyl esterase activity | 2.85E-02 |
| 48 | GO:0045735: nutrient reservoir activity | 2.99E-02 |
| 49 | GO:0004672: protein kinase activity | 3.02E-02 |
| 50 | GO:0030599: pectinesterase activity | 3.26E-02 |
| 51 | GO:0003779: actin binding | 3.33E-02 |
| 52 | GO:0016746: transferase activity, transferring acyl groups | 3.48E-02 |
| 53 | GO:0015144: carbohydrate transmembrane transporter activity | 4.54E-02 |
| 54 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.78E-02 |
| 55 | GO:0005351: sugar:proton symporter activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031224: intrinsic component of membrane | 0.00E+00 |
| 2 | GO:0031225: anchored component of membrane | 8.32E-08 |
| 3 | GO:0005618: cell wall | 1.16E-06 |
| 4 | GO:0005576: extracellular region | 5.11E-06 |
| 5 | GO:0048046: apoplast | 6.22E-06 |
| 6 | GO:0046658: anchored component of plasma membrane | 1.56E-05 |
| 7 | GO:0009505: plant-type cell wall | 5.71E-05 |
| 8 | GO:0000139: Golgi membrane | 7.09E-05 |
| 9 | GO:0005794: Golgi apparatus | 4.87E-04 |
| 10 | GO:0005775: vacuolar lumen | 5.46E-04 |
| 11 | GO:0009346: citrate lyase complex | 5.46E-04 |
| 12 | GO:0005886: plasma membrane | 1.51E-03 |
| 13 | GO:0000123: histone acetyltransferase complex | 1.57E-03 |
| 14 | GO:0045298: tubulin complex | 2.33E-03 |
| 15 | GO:0055028: cortical microtubule | 2.90E-03 |
| 16 | GO:0030176: integral component of endoplasmic reticulum membrane | 4.49E-03 |
| 17 | GO:0016021: integral component of membrane | 5.44E-03 |
| 18 | GO:0030529: intracellular ribonucleoprotein complex | 1.25E-02 |
| 19 | GO:0009506: plasmodesma | 1.29E-02 |
| 20 | GO:0000325: plant-type vacuole | 1.68E-02 |
| 21 | GO:0031902: late endosome membrane | 2.02E-02 |
| 22 | GO:0005774: vacuolar membrane | 2.83E-02 |