GO Enrichment Analysis of Co-expressed Genes with
AT3G54390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010336: gibberellic acid homeostasis | 0.00E+00 |
| 2 | GO:0000024: maltose biosynthetic process | 0.00E+00 |
| 3 | GO:0010423: negative regulation of brassinosteroid biosynthetic process | 0.00E+00 |
| 4 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 5 | GO:0009722: detection of cytokinin stimulus | 0.00E+00 |
| 6 | GO:0009264: deoxyribonucleotide catabolic process | 0.00E+00 |
| 7 | GO:0071345: cellular response to cytokine stimulus | 0.00E+00 |
| 8 | GO:0015822: ornithine transport | 0.00E+00 |
| 9 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 10 | GO:0006559: L-phenylalanine catabolic process | 4.77E-06 |
| 11 | GO:0006659: phosphatidylserine biosynthetic process | 3.90E-05 |
| 12 | GO:0019605: butyrate metabolic process | 3.90E-05 |
| 13 | GO:0071454: cellular response to anoxia | 3.90E-05 |
| 14 | GO:0006083: acetate metabolic process | 3.90E-05 |
| 15 | GO:0000066: mitochondrial ornithine transport | 3.90E-05 |
| 16 | GO:0019388: galactose catabolic process | 9.72E-05 |
| 17 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 9.72E-05 |
| 18 | GO:0009411: response to UV | 1.32E-04 |
| 19 | GO:0016117: carotenoid biosynthetic process | 1.58E-04 |
| 20 | GO:0046417: chorismate metabolic process | 1.68E-04 |
| 21 | GO:0006651: diacylglycerol biosynthetic process | 1.68E-04 |
| 22 | GO:0006520: cellular amino acid metabolic process | 1.86E-04 |
| 23 | GO:0009650: UV protection | 2.48E-04 |
| 24 | GO:0009590: detection of gravity | 2.48E-04 |
| 25 | GO:0006572: tyrosine catabolic process | 2.48E-04 |
| 26 | GO:0009963: positive regulation of flavonoid biosynthetic process | 2.48E-04 |
| 27 | GO:0042823: pyridoxal phosphate biosynthetic process | 2.48E-04 |
| 28 | GO:0006021: inositol biosynthetic process | 3.33E-04 |
| 29 | GO:0009765: photosynthesis, light harvesting | 3.33E-04 |
| 30 | GO:0006097: glyoxylate cycle | 4.25E-04 |
| 31 | GO:0071493: cellular response to UV-B | 4.25E-04 |
| 32 | GO:0016120: carotene biosynthetic process | 4.25E-04 |
| 33 | GO:0009813: flavonoid biosynthetic process | 4.61E-04 |
| 34 | GO:0080167: response to karrikin | 5.07E-04 |
| 35 | GO:0009643: photosynthetic acclimation | 5.22E-04 |
| 36 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 5.22E-04 |
| 37 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 5.22E-04 |
| 38 | GO:0098869: cellular oxidant detoxification | 7.28E-04 |
| 39 | GO:0006629: lipid metabolic process | 8.23E-04 |
| 40 | GO:0005978: glycogen biosynthetic process | 8.37E-04 |
| 41 | GO:0008152: metabolic process | 9.27E-04 |
| 42 | GO:0046916: cellular transition metal ion homeostasis | 1.07E-03 |
| 43 | GO:0051555: flavonol biosynthetic process | 1.31E-03 |
| 44 | GO:0009073: aromatic amino acid family biosynthetic process | 1.44E-03 |
| 45 | GO:0000272: polysaccharide catabolic process | 1.44E-03 |
| 46 | GO:0048229: gametophyte development | 1.44E-03 |
| 47 | GO:0009698: phenylpropanoid metabolic process | 1.44E-03 |
| 48 | GO:0005983: starch catabolic process | 1.58E-03 |
| 49 | GO:0006006: glucose metabolic process | 1.72E-03 |
| 50 | GO:0010223: secondary shoot formation | 1.86E-03 |
| 51 | GO:0009934: regulation of meristem structural organization | 1.86E-03 |
| 52 | GO:0034605: cellular response to heat | 1.86E-03 |
| 53 | GO:0019253: reductive pentose-phosphate cycle | 1.86E-03 |
| 54 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.48E-03 |
| 55 | GO:0006366: transcription from RNA polymerase II promoter | 2.64E-03 |
| 56 | GO:0010584: pollen exine formation | 3.15E-03 |
| 57 | GO:0070417: cellular response to cold | 3.32E-03 |
| 58 | GO:0042335: cuticle development | 3.50E-03 |
| 59 | GO:0009723: response to ethylene | 3.95E-03 |
| 60 | GO:0019252: starch biosynthetic process | 4.06E-03 |
| 61 | GO:0008654: phospholipid biosynthetic process | 4.06E-03 |
| 62 | GO:0009791: post-embryonic development | 4.06E-03 |
| 63 | GO:0071555: cell wall organization | 4.07E-03 |
| 64 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.26E-03 |
| 65 | GO:0016125: sterol metabolic process | 4.85E-03 |
| 66 | GO:0010286: heat acclimation | 5.05E-03 |
| 67 | GO:0042128: nitrate assimilation | 5.91E-03 |
| 68 | GO:0048573: photoperiodism, flowering | 6.13E-03 |
| 69 | GO:0018298: protein-chromophore linkage | 6.58E-03 |
| 70 | GO:0009407: toxin catabolic process | 7.04E-03 |
| 71 | GO:0010218: response to far red light | 7.04E-03 |
| 72 | GO:0010119: regulation of stomatal movement | 7.27E-03 |
| 73 | GO:0009637: response to blue light | 7.75E-03 |
| 74 | GO:0030001: metal ion transport | 8.48E-03 |
| 75 | GO:0006839: mitochondrial transport | 8.48E-03 |
| 76 | GO:0006631: fatty acid metabolic process | 8.74E-03 |
| 77 | GO:0010114: response to red light | 9.25E-03 |
| 78 | GO:0009926: auxin polar transport | 9.25E-03 |
| 79 | GO:0009744: response to sucrose | 9.25E-03 |
| 80 | GO:0042546: cell wall biogenesis | 9.51E-03 |
| 81 | GO:0009636: response to toxic substance | 1.00E-02 |
| 82 | GO:0009416: response to light stimulus | 1.11E-02 |
| 83 | GO:0009611: response to wounding | 1.13E-02 |
| 84 | GO:0009809: lignin biosynthetic process | 1.14E-02 |
| 85 | GO:0010224: response to UV-B | 1.17E-02 |
| 86 | GO:0006857: oligopeptide transport | 1.20E-02 |
| 87 | GO:0009909: regulation of flower development | 1.23E-02 |
| 88 | GO:0018105: peptidyl-serine phosphorylation | 1.49E-02 |
| 89 | GO:0009742: brassinosteroid mediated signaling pathway | 1.52E-02 |
| 90 | GO:0006508: proteolysis | 1.69E-02 |
| 91 | GO:0009058: biosynthetic process | 1.78E-02 |
| 92 | GO:0009845: seed germination | 1.81E-02 |
| 93 | GO:0007623: circadian rhythm | 2.16E-02 |
| 94 | GO:0009739: response to gibberellin | 2.34E-02 |
| 95 | GO:0009733: response to auxin | 2.52E-02 |
| 96 | GO:0006810: transport | 3.30E-02 |
| 97 | GO:0005975: carbohydrate metabolic process | 3.41E-02 |
| 98 | GO:0046777: protein autophosphorylation | 3.60E-02 |
| 99 | GO:0015979: photosynthesis | 3.77E-02 |
| 100 | GO:0016042: lipid catabolic process | 4.43E-02 |
| 101 | GO:0009751: response to salicylic acid | 4.48E-02 |
| 102 | GO:0009408: response to heat | 4.53E-02 |
| 103 | GO:0009753: response to jasmonic acid | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 2 | GO:1990055: phenylacetaldehyde synthase activity | 0.00E+00 |
| 3 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 4 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 5 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 6 | GO:0045430: chalcone isomerase activity | 1.81E-06 |
| 7 | GO:0102229: amylopectin maltohydrolase activity | 4.77E-06 |
| 8 | GO:0016161: beta-amylase activity | 6.94E-06 |
| 9 | GO:0047760: butyrate-CoA ligase activity | 3.90E-05 |
| 10 | GO:0004837: tyrosine decarboxylase activity | 3.90E-05 |
| 11 | GO:0003987: acetate-CoA ligase activity | 3.90E-05 |
| 12 | GO:0004106: chorismate mutase activity | 9.72E-05 |
| 13 | GO:0004614: phosphoglucomutase activity | 9.72E-05 |
| 14 | GO:0016868: intramolecular transferase activity, phosphotransferases | 9.72E-05 |
| 15 | GO:0000064: L-ornithine transmembrane transporter activity | 9.72E-05 |
| 16 | GO:0004512: inositol-3-phosphate synthase activity | 9.72E-05 |
| 17 | GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity | 1.68E-04 |
| 18 | GO:0008253: 5'-nucleotidase activity | 1.68E-04 |
| 19 | GO:0001872: (1->3)-beta-D-glucan binding | 2.48E-04 |
| 20 | GO:0046527: glucosyltransferase activity | 3.33E-04 |
| 21 | GO:0016208: AMP binding | 5.22E-04 |
| 22 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 5.22E-04 |
| 23 | GO:0016688: L-ascorbate peroxidase activity | 5.22E-04 |
| 24 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 6.22E-04 |
| 25 | GO:0008195: phosphatidate phosphatase activity | 6.22E-04 |
| 26 | GO:0043295: glutathione binding | 7.28E-04 |
| 27 | GO:0016621: cinnamoyl-CoA reductase activity | 7.28E-04 |
| 28 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 8.37E-04 |
| 29 | GO:0046914: transition metal ion binding | 9.50E-04 |
| 30 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 9.50E-04 |
| 31 | GO:0016757: transferase activity, transferring glycosyl groups | 1.00E-03 |
| 32 | GO:0016207: 4-coumarate-CoA ligase activity | 1.07E-03 |
| 33 | GO:0047372: acylglycerol lipase activity | 1.44E-03 |
| 34 | GO:0004860: protein kinase inhibitor activity | 1.44E-03 |
| 35 | GO:0030170: pyridoxal phosphate binding | 1.80E-03 |
| 36 | GO:0004175: endopeptidase activity | 1.86E-03 |
| 37 | GO:0031409: pigment binding | 2.16E-03 |
| 38 | GO:0001046: core promoter sequence-specific DNA binding | 2.32E-03 |
| 39 | GO:0008194: UDP-glycosyltransferase activity | 2.49E-03 |
| 40 | GO:0004176: ATP-dependent peptidase activity | 2.64E-03 |
| 41 | GO:0046982: protein heterodimerization activity | 3.36E-03 |
| 42 | GO:0016759: cellulose synthase activity | 4.85E-03 |
| 43 | GO:0008237: metallopeptidase activity | 5.05E-03 |
| 44 | GO:0016168: chlorophyll binding | 5.69E-03 |
| 45 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 5.91E-03 |
| 46 | GO:0004683: calmodulin-dependent protein kinase activity | 6.13E-03 |
| 47 | GO:0004806: triglyceride lipase activity | 6.13E-03 |
| 48 | GO:0030247: polysaccharide binding | 6.13E-03 |
| 49 | GO:0008236: serine-type peptidase activity | 6.35E-03 |
| 50 | GO:0004222: metalloendopeptidase activity | 7.04E-03 |
| 51 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 7.27E-03 |
| 52 | GO:0004364: glutathione transferase activity | 8.99E-03 |
| 53 | GO:0004185: serine-type carboxypeptidase activity | 9.25E-03 |
| 54 | GO:0004650: polygalacturonase activity | 1.37E-02 |
| 55 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.37E-02 |
| 56 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.37E-02 |
| 57 | GO:0016874: ligase activity | 1.40E-02 |
| 58 | GO:0016758: transferase activity, transferring hexosyl groups | 1.68E-02 |
| 59 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.75E-02 |
| 60 | GO:0016829: lyase activity | 1.81E-02 |
| 61 | GO:0003824: catalytic activity | 2.47E-02 |
| 62 | GO:0000287: magnesium ion binding | 2.90E-02 |
| 63 | GO:0008233: peptidase activity | 3.39E-02 |
| 64 | GO:0004497: monooxygenase activity | 3.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097708: intracellular vesicle | 0.00E+00 |
| 2 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 1.68E-04 |
| 3 | GO:0009509: chromoplast | 1.68E-04 |
| 4 | GO:0009507: chloroplast | 1.90E-04 |
| 5 | GO:0009941: chloroplast envelope | 1.76E-03 |
| 6 | GO:0005764: lysosome | 1.86E-03 |
| 7 | GO:0030076: light-harvesting complex | 2.01E-03 |
| 8 | GO:0043234: protein complex | 2.16E-03 |
| 9 | GO:0009522: photosystem I | 3.87E-03 |
| 10 | GO:0009523: photosystem II | 4.06E-03 |
| 11 | GO:0010319: stromule | 5.05E-03 |
| 12 | GO:0009536: plastid | 5.27E-03 |
| 13 | GO:0005743: mitochondrial inner membrane | 5.79E-03 |
| 14 | GO:0009570: chloroplast stroma | 1.21E-02 |
| 15 | GO:0010287: plastoglobule | 1.65E-02 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 1.72E-02 |
| 17 | GO:0009705: plant-type vacuole membrane | 2.16E-02 |
| 18 | GO:0046658: anchored component of plasma membrane | 2.63E-02 |
| 19 | GO:0000139: Golgi membrane | 3.04E-02 |
| 20 | GO:0005783: endoplasmic reticulum | 4.69E-02 |
| 21 | GO:0043231: intracellular membrane-bounded organelle | 4.85E-02 |