Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G54280

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000023: regulation of lateral root development0.00E+00
2GO:0006338: chromatin remodeling1.85E-04
3GO:0008284: positive regulation of cell proliferation2.68E-04
4GO:0016579: protein deubiquitination4.20E-04
5GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.53E-04
6GO:0009627: systemic acquired resistance4.69E-04
7GO:0009631: cold acclimation5.70E-04
8GO:0008283: cell proliferation7.13E-04
9GO:0009736: cytokinin-activated signaling pathway8.63E-04
10GO:0016569: covalent chromatin modification1.04E-03
11GO:0040008: regulation of growth1.49E-03
12GO:0009739: response to gibberellin1.66E-03
13GO:0045892: negative regulation of transcription, DNA-templated2.71E-03
14GO:0048364: root development3.18E-03
15GO:0006357: regulation of transcription from RNA polymerase II promoter3.74E-03
16GO:0045893: positive regulation of transcription, DNA-templated5.02E-03
17GO:0006511: ubiquitin-dependent protein catabolic process5.64E-03
18GO:0009733: response to auxin8.07E-03
19GO:0007275: multicellular organism development1.20E-02
20GO:0007165: signal transduction1.25E-02
21GO:0006355: regulation of transcription, DNA-templated3.77E-02
RankGO TermAdjusted P value
1GO:0001104: RNA polymerase II transcription cofactor activity6.80E-05
2GO:0003678: DNA helicase activity7.81E-05
3GO:0043424: protein histidine kinase binding1.98E-04
4GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.11E-04
5GO:0004843: thiol-dependent ubiquitin-specific protease activity3.42E-04
6GO:0016746: transferase activity, transferring acyl groups1.10E-03
7GO:0004386: helicase activity1.14E-03
8GO:0008233: peptidase activity2.35E-03
9GO:0016887: ATPase activity4.17E-03
10GO:0003677: DNA binding4.66E-03
11GO:0008270: zinc ion binding1.12E-02
RankGO TermAdjusted P value
1GO:0070847: core mediator complex3.30E-05
2GO:0031307: integral component of mitochondrial outer membrane1.22E-04
3GO:0016592: mediator complex3.57E-04
4GO:0031966: mitochondrial membrane8.25E-04
5GO:0005634: nucleus3.78E-03
6GO:0009506: plasmodesma4.67E-02
Gene type



Gene DE type