Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G53800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1904526: regulation of microtubule binding0.00E+00
2GO:0015995: chlorophyll biosynthetic process2.41E-05
3GO:0006783: heme biosynthetic process3.12E-05
4GO:0006782: protoporphyrinogen IX biosynthetic process4.63E-05
5GO:0015671: oxygen transport5.03E-05
6GO:0010028: xanthophyll cycle5.03E-05
7GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.03E-05
8GO:0006824: cobalt ion transport5.03E-05
9GO:0015979: photosynthesis9.99E-05
10GO:0016122: xanthophyll metabolic process1.23E-04
11GO:0034755: iron ion transmembrane transport1.23E-04
12GO:0010306: rhamnogalacturonan II biosynthetic process3.09E-04
13GO:0042938: dipeptide transport4.15E-04
14GO:0009765: photosynthesis, light harvesting4.15E-04
15GO:0015994: chlorophyll metabolic process4.15E-04
16GO:0045926: negative regulation of growth7.68E-04
17GO:0009942: longitudinal axis specification7.68E-04
18GO:0006631: fatty acid metabolic process8.91E-04
19GO:0009645: response to low light intensity stimulus8.97E-04
20GO:0009769: photosynthesis, light harvesting in photosystem II8.97E-04
21GO:0009787: regulation of abscisic acid-activated signaling pathway1.03E-03
22GO:0007389: pattern specification process1.17E-03
23GO:0010206: photosystem II repair1.32E-03
24GO:0019432: triglyceride biosynthetic process1.32E-03
25GO:0008202: steroid metabolic process1.47E-03
26GO:0006949: syncytium formation1.63E-03
27GO:0009750: response to fructose1.79E-03
28GO:0009698: phenylpropanoid metabolic process1.79E-03
29GO:0015706: nitrate transport1.96E-03
30GO:0030048: actin filament-based movement2.14E-03
31GO:0009735: response to cytokinin2.26E-03
32GO:0009768: photosynthesis, light harvesting in photosystem I3.08E-03
33GO:0007017: microtubule-based process3.08E-03
34GO:0009269: response to desiccation3.29E-03
35GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.71E-03
36GO:0048868: pollen tube development4.60E-03
37GO:0007018: microtubule-based movement4.83E-03
38GO:0009749: response to glucose5.07E-03
39GO:0010193: response to ozone5.32E-03
40GO:0010583: response to cyclopentenone5.56E-03
41GO:1901657: glycosyl compound metabolic process5.81E-03
42GO:0009828: plant-type cell wall loosening6.07E-03
43GO:0010252: auxin homeostasis6.07E-03
44GO:0006869: lipid transport7.68E-03
45GO:0018298: protein-chromophore linkage8.24E-03
46GO:0010218: response to far red light8.82E-03
47GO:0007568: aging9.12E-03
48GO:0009637: response to blue light9.73E-03
49GO:0010114: response to red light1.16E-02
50GO:0009926: auxin polar transport1.16E-02
51GO:0009744: response to sucrose1.16E-02
52GO:0009644: response to high light intensity1.23E-02
53GO:0009664: plant-type cell wall organization1.37E-02
54GO:0010224: response to UV-B1.47E-02
55GO:0006857: oligopeptide transport1.51E-02
56GO:0009740: gibberellic acid mediated signaling pathway1.77E-02
57GO:0006508: proteolysis2.56E-02
58GO:0009739: response to gibberellin2.95E-02
59GO:0006470: protein dephosphorylation2.99E-02
60GO:0009826: unidimensional cell growth3.61E-02
61GO:0009860: pollen tube growth3.91E-02
62GO:0009409: response to cold4.21E-02
63GO:0080167: response to karrikin4.32E-02
64GO:0046777: protein autophosphorylation4.54E-02
65GO:0005975: carbohydrate metabolic process4.71E-02
66GO:0045892: negative regulation of transcription, DNA-templated4.97E-02
RankGO TermAdjusted P value
1GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
2GO:0046422: violaxanthin de-epoxidase activity0.00E+00
3GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
4GO:0005344: oxygen transporter activity5.03E-05
5GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.03E-05
6GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity5.03E-05
7GO:0016868: intramolecular transferase activity, phosphotransferases1.23E-04
8GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.23E-04
9GO:0019201: nucleotide kinase activity3.09E-04
10GO:0016851: magnesium chelatase activity3.09E-04
11GO:0042936: dipeptide transporter activity4.15E-04
12GO:0004017: adenylate kinase activity7.68E-04
13GO:0004602: glutathione peroxidase activity7.68E-04
14GO:0008142: oxysterol binding1.17E-03
15GO:0003777: microtubule motor activity1.41E-03
16GO:0009672: auxin:proton symporter activity1.47E-03
17GO:0005381: iron ion transmembrane transporter activity1.47E-03
18GO:0008289: lipid binding1.86E-03
19GO:0031072: heat shock protein binding2.14E-03
20GO:0010329: auxin efflux transmembrane transporter activity2.14E-03
21GO:0003774: motor activity2.32E-03
22GO:0031409: pigment binding2.69E-03
23GO:0003756: protein disulfide isomerase activity3.93E-03
24GO:0019901: protein kinase binding5.07E-03
25GO:0005200: structural constituent of cytoskeleton6.33E-03
26GO:0005215: transporter activity7.02E-03
27GO:0016168: chlorophyll binding7.12E-03
28GO:0102483: scopolin beta-glucosidase activity7.68E-03
29GO:0008757: S-adenosylmethionine-dependent methyltransferase activity7.96E-03
30GO:0008422: beta-glucosidase activity1.03E-02
31GO:0004712: protein serine/threonine/tyrosine kinase activity1.03E-02
32GO:0004185: serine-type carboxypeptidase activity1.16E-02
33GO:0035091: phosphatidylinositol binding1.23E-02
34GO:0051082: unfolded protein binding1.84E-02
35GO:0004252: serine-type endopeptidase activity2.33E-02
36GO:0008017: microtubule binding2.81E-02
37GO:0016788: hydrolase activity, acting on ester bonds3.76E-02
38GO:0052689: carboxylic ester hydrolase activity4.64E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009534: chloroplast thylakoid5.15E-13
3GO:0009535: chloroplast thylakoid membrane1.46E-12
4GO:0009507: chloroplast2.38E-07
5GO:0009570: chloroplast stroma1.30E-05
6GO:0030095: chloroplast photosystem II8.62E-05
7GO:0010007: magnesium chelatase complex2.11E-04
8GO:0009543: chloroplast thylakoid lumen2.18E-04
9GO:0009522: photosystem I2.81E-04
10GO:0042646: plastid nucleoid3.09E-04
11GO:0009517: PSII associated light-harvesting complex II4.15E-04
12GO:0016363: nuclear matrix7.68E-04
13GO:0009941: chloroplast envelope8.01E-04
14GO:0031977: thylakoid lumen8.91E-04
15GO:0009538: photosystem I reaction center1.03E-03
16GO:0045298: tubulin complex1.32E-03
17GO:0016459: myosin complex1.63E-03
18GO:0010287: plastoglobule2.12E-03
19GO:0030076: light-harvesting complex2.50E-03
20GO:0009579: thylakoid3.17E-03
21GO:0005871: kinesin complex4.15E-03
22GO:0009523: photosystem II5.07E-03
23GO:0005874: microtubule5.66E-03
24GO:0016021: integral component of membrane1.73E-02
25GO:0009706: chloroplast inner membrane1.84E-02
Gene type



Gene DE type