co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G53430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044843: cell cycle G1/S phase transition	0.00E+00
2	GO:0071731: response to nitric oxide	0.00E+00
3	GO:0006412: translation	7.82E-64
4	GO:0042254: ribosome biogenesis	1.04E-24
5	GO:0009735: response to cytokinin	1.87E-08
6	GO:0000027: ribosomal large subunit assembly	3.56E-08
7	GO:0009955: adaxial/abaxial pattern specification	1.63E-05
8	GO:0006900: membrane budding	6.58E-05
9	GO:0009220: pyrimidine ribonucleotide biosynthetic process	1.59E-04
10	GO:0009967: positive regulation of signal transduction	1.59E-04
11	GO:0002181: cytoplasmic translation	2.69E-04
12	GO:0010476: gibberellin mediated signaling pathway	2.69E-04
13	GO:0044205: 'de novo' UMP biosynthetic process	5.20E-04
14	GO:0042274: ribosomal small subunit biogenesis	5.20E-04
15	GO:0071493: cellular response to UV-B	6.60E-04
16	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.12E-03
17	GO:0006605: protein targeting	1.29E-03
18	GO:0000028: ribosomal small subunit assembly	1.29E-03
19	GO:0008283: cell proliferation	1.34E-03
20	GO:0001558: regulation of cell growth	1.47E-03
21	GO:0009965: leaf morphogenesis	1.50E-03
22	GO:0006364: rRNA processing	1.79E-03
23	GO:0000387: spliceosomal snRNP assembly	1.85E-03
24	GO:0010015: root morphogenesis	2.26E-03
25	GO:0006913: nucleocytoplasmic transport	2.26E-03
26	GO:0006820: anion transport	2.48E-03
27	GO:0010102: lateral root morphogenesis	2.70E-03
28	GO:0006626: protein targeting to mitochondrion	2.70E-03
29	GO:0030150: protein import into mitochondrial matrix	3.65E-03
30	GO:0051302: regulation of cell division	3.90E-03
31	GO:0006413: translational initiation	4.05E-03
32	GO:0007005: mitochondrion organization	4.43E-03
33	GO:0040007: growth	4.70E-03
34	GO:0071215: cellular response to abscisic acid stimulus	4.70E-03
35	GO:0051028: mRNA transport	5.26E-03
36	GO:0000413: protein peptidyl-prolyl isomerization	5.55E-03
37	GO:0006520: cellular amino acid metabolic process	5.85E-03
38	GO:0009749: response to glucose	6.45E-03
39	GO:0006414: translational elongation	6.55E-03
40	GO:0032502: developmental process	7.08E-03
41	GO:0009793: embryo development ending in seed dormancy	7.09E-03
42	GO:0016049: cell growth	1.02E-02
43	GO:0006811: ion transport	1.13E-02
44	GO:0048527: lateral root development	1.17E-02
45	GO:0009853: photorespiration	1.24E-02
46	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.70E-02
47	GO:0006417: regulation of translation	1.98E-02
48	GO:0000398: mRNA splicing, via spliceosome	2.62E-02
49	GO:0009845: seed germination	2.93E-02
50	GO:0016036: cellular response to phosphate starvation	3.32E-02
51	GO:0010228: vegetative to reproductive phase transition of meristem	3.60E-02
52	GO:0009739: response to gibberellin	3.78E-02
53	GO:0009651: response to salt stress	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0004070: aspartate carbamoyltransferase activity	0.00E+00
2	GO:0016018: cyclosporin A binding	0.00E+00
3	GO:0003735: structural constituent of ribosome	9.11E-76
4	GO:0003729: mRNA binding	2.30E-18
5	GO:0019843: rRNA binding	8.95E-07
6	GO:0008097: 5S rRNA binding	2.29E-06
7	GO:0005078: MAP-kinase scaffold activity	1.59E-04
8	GO:0016743: carboxyl- or carbamoyltransferase activity	1.59E-04
9	GO:0070180: large ribosomal subunit rRNA binding	2.69E-04
10	GO:0032947: protein complex scaffold	2.69E-04
11	GO:0008235: metalloexopeptidase activity	1.12E-03
12	GO:0015288: porin activity	1.29E-03
13	GO:0003723: RNA binding	1.31E-03
14	GO:0008308: voltage-gated anion channel activity	1.47E-03
15	GO:0015266: protein channel activity	2.70E-03
16	GO:0004089: carbonate dehydratase activity	2.70E-03
17	GO:0000166: nucleotide binding	3.95E-03
18	GO:0016597: amino acid binding	8.40E-03
19	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.05E-02
20	GO:0003746: translation elongation factor activity	1.24E-02
21	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.66E-02
22	GO:0003743: translation initiation factor activity	3.89E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0022626: cytosolic ribosome	5.31E-66
3	GO:0005840: ribosome	1.06E-46
4	GO:0022625: cytosolic large ribosomal subunit	1.23E-44
5	GO:0022627: cytosolic small ribosomal subunit	1.98E-29
6	GO:0005730: nucleolus	4.52E-24
7	GO:0005737: cytoplasm	6.19E-20
8	GO:0005829: cytosol	3.15E-18
9	GO:0009506: plasmodesma	3.80E-14
10	GO:0015934: large ribosomal subunit	4.78E-14
11	GO:0005774: vacuolar membrane	2.20E-10
12	GO:0005773: vacuole	2.21E-10
13	GO:0016020: membrane	6.08E-09
14	GO:0005618: cell wall	6.65E-09
15	GO:0015935: small ribosomal subunit	5.25E-06
16	GO:0005886: plasma membrane	7.39E-05
17	GO:0034719: SMN-Sm protein complex	2.69E-04
18	GO:0005682: U5 snRNP	5.20E-04
19	GO:0005687: U4 snRNP	6.60E-04
20	GO:0097526: spliceosomal tri-snRNP complex	6.60E-04
21	GO:0005689: U12-type spliceosomal complex	9.59E-04
22	GO:0071004: U2-type prespliceosome	1.29E-03
23	GO:0046930: pore complex	1.47E-03
24	GO:0005742: mitochondrial outer membrane translocase complex	1.47E-03
25	GO:0005685: U1 snRNP	1.65E-03
26	GO:0071011: precatalytic spliceosome	1.85E-03
27	GO:0005686: U2 snRNP	2.05E-03
28	GO:0005747: mitochondrial respiratory chain complex I	2.18E-03
29	GO:0005834: heterotrimeric G-protein complex	2.24E-03
30	GO:0071013: catalytic step 2 spliceosome	2.26E-03
31	GO:0048471: perinuclear region of cytoplasm	2.26E-03
32	GO:0005852: eukaryotic translation initiation factor 3 complex	2.26E-03
33	GO:0019013: viral nucleocapsid	2.70E-03
34	GO:0045271: respiratory chain complex I	3.90E-03
35	GO:0005741: mitochondrial outer membrane	4.17E-03
36	GO:0009507: chloroplast	5.00E-03
37	GO:0030529: intracellular ribonucleoprotein complex	8.74E-03
38	GO:0005643: nuclear pore	1.05E-02
39	GO:0031966: mitochondrial membrane	1.75E-02
40	GO:0005635: nuclear envelope	1.93E-02
41	GO:0005681: spliceosomal complex	2.07E-02
42	GO:0005732: small nucleolar ribonucleoprotein complex	2.51E-02
43	GO:0005623: cell	2.82E-02
44	GO:0005622: intracellular	3.87E-02