Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G52890

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901918: negative regulation of exoribonuclease activity0.00E+00
2GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
3GO:0015995: chlorophyll biosynthetic process2.89E-06
4GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.65E-05
5GO:0009228: thiamine biosynthetic process2.65E-05
6GO:0010019: chloroplast-nucleus signaling pathway3.30E-05
7GO:0009231: riboflavin biosynthetic process4.74E-05
8GO:0009657: plastid organization5.52E-05
9GO:0043085: positive regulation of catalytic activity9.04E-05
10GO:0006636: unsaturated fatty acid biosynthetic process1.41E-04
11GO:0016114: terpenoid biosynthetic process1.74E-04
12GO:0009631: cold acclimation4.78E-04
13GO:0010114: response to red light5.98E-04
14GO:0009585: red, far-red light phototransduction7.24E-04
15GO:0006417: regulation of translation7.73E-04
16GO:0006396: RNA processing9.24E-04
17GO:0006633: fatty acid biosynthetic process1.21E-03
18GO:0006397: mRNA processing2.65E-03
19GO:0009793: embryo development ending in seed dormancy1.11E-02
20GO:0006468: protein phosphorylation2.62E-02
RankGO TermAdjusted P value
1GO:0046906: tetrapyrrole binding1.21E-06
2GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity3.46E-06
3GO:0004312: fatty acid synthase activity3.46E-06
4GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity6.60E-06
5GO:0043621: protein self-association6.91E-06
6GO:0019899: enzyme binding3.99E-05
7GO:0003727: single-stranded RNA binding2.10E-04
8GO:0016791: phosphatase activity3.24E-04
9GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.07E-03
10GO:0004497: monooxygenase activity1.98E-03
11GO:0019825: oxygen binding4.83E-03
12GO:0005506: iron ion binding6.09E-03
13GO:0020037: heme binding8.46E-03
14GO:0016787: hydrolase activity1.05E-02
RankGO TermAdjusted P value
1GO:0031969: chloroplast membrane6.00E-05
2GO:0009570: chloroplast stroma1.72E-04
3GO:0009507: chloroplast5.13E-03
4GO:0009536: plastid7.10E-03
5GO:0005774: vacuolar membrane1.47E-02
6GO:0009941: chloroplast envelope1.83E-02
7GO:0009506: plasmodesma3.85E-02
Gene type



Gene DE type