co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G52850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
2	GO:0009991: response to extracellular stimulus	0.00E+00
3	GO:0006593: ornithine catabolic process	0.00E+00
4	GO:0032780: negative regulation of ATPase activity	0.00E+00
5	GO:0006482: protein demethylation	0.00E+00
6	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.41E-07
7	GO:0001676: long-chain fatty acid metabolic process	1.21E-05
8	GO:0030433: ubiquitin-dependent ERAD pathway	5.09E-05
9	GO:0050790: regulation of catalytic activity	1.01E-04
10	GO:0030163: protein catabolic process	1.57E-04
11	GO:0019544: arginine catabolic process to glutamate	1.71E-04
12	GO:0080120: CAAX-box protein maturation	1.71E-04
13	GO:0071586: CAAX-box protein processing	1.71E-04
14	GO:0080173: male-female gamete recognition during double fertilization	1.71E-04
15	GO:0006481: C-terminal protein methylation	1.71E-04
16	GO:0033306: phytol metabolic process	1.71E-04
17	GO:0034214: protein hexamerization	1.71E-04
18	GO:0015865: purine nucleotide transport	3.87E-04
19	GO:0019441: tryptophan catabolic process to kynurenine	3.87E-04
20	GO:0097054: L-glutamate biosynthetic process	3.87E-04
21	GO:0009156: ribonucleoside monophosphate biosynthetic process	3.87E-04
22	GO:0031648: protein destabilization	3.87E-04
23	GO:0015824: proline transport	3.87E-04
24	GO:0019521: D-gluconate metabolic process	3.87E-04
25	GO:0006631: fatty acid metabolic process	5.34E-04
26	GO:0010359: regulation of anion channel activity	6.32E-04
27	GO:0010476: gibberellin mediated signaling pathway	6.32E-04
28	GO:0010325: raffinose family oligosaccharide biosynthetic process	6.32E-04
29	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	6.32E-04
30	GO:0048281: inflorescence morphogenesis	6.32E-04
31	GO:0010498: proteasomal protein catabolic process	6.32E-04
32	GO:0051646: mitochondrion localization	6.32E-04
33	GO:0031408: oxylipin biosynthetic process	7.97E-04
34	GO:0010255: glucose mediated signaling pathway	9.04E-04
35	GO:0046902: regulation of mitochondrial membrane permeability	9.04E-04
36	GO:0006537: glutamate biosynthetic process	9.04E-04
37	GO:0006508: proteolysis	9.93E-04
38	GO:0009165: nucleotide biosynthetic process	1.20E-03
39	GO:0006542: glutamine biosynthetic process	1.20E-03
40	GO:0019676: ammonia assimilation cycle	1.20E-03
41	GO:0046345: abscisic acid catabolic process	1.20E-03
42	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.20E-03
43	GO:0009651: response to salt stress	1.22E-03
44	GO:1902456: regulation of stomatal opening	1.87E-03
45	GO:0006561: proline biosynthetic process	1.87E-03
46	GO:0070814: hydrogen sulfide biosynthetic process	1.87E-03
47	GO:0035435: phosphate ion transmembrane transport	1.87E-03
48	GO:0006511: ubiquitin-dependent protein catabolic process	1.95E-03
49	GO:0048444: floral organ morphogenesis	2.24E-03
50	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.39E-03
51	GO:0046686: response to cadmium ion	2.49E-03
52	GO:0050829: defense response to Gram-negative bacterium	2.64E-03
53	GO:0006102: isocitrate metabolic process	3.06E-03
54	GO:0030968: endoplasmic reticulum unfolded protein response	3.50E-03
55	GO:0009056: catabolic process	3.95E-03
56	GO:0009051: pentose-phosphate shunt, oxidative branch	3.95E-03
57	GO:0006098: pentose-phosphate shunt	3.95E-03
58	GO:0019432: triglyceride biosynthetic process	3.95E-03
59	GO:0090305: nucleic acid phosphodiester bond hydrolysis	3.95E-03
60	GO:2000280: regulation of root development	4.44E-03
61	GO:0051707: response to other organism	4.78E-03
62	GO:0000103: sulfate assimilation	4.93E-03
63	GO:0006032: chitin catabolic process	4.93E-03
64	GO:0043069: negative regulation of programmed cell death	4.93E-03
65	GO:0019538: protein metabolic process	4.93E-03
66	GO:0055114: oxidation-reduction process	5.24E-03
67	GO:0072593: reactive oxygen species metabolic process	5.45E-03
68	GO:0000272: polysaccharide catabolic process	5.45E-03
69	GO:0018119: peptidyl-cysteine S-nitrosylation	5.45E-03
70	GO:0006790: sulfur compound metabolic process	5.98E-03
71	GO:0016310: phosphorylation	6.08E-03
72	GO:0006807: nitrogen compound metabolic process	6.54E-03
73	GO:0006006: glucose metabolic process	6.54E-03
74	GO:0051603: proteolysis involved in cellular protein catabolic process	6.66E-03
75	GO:0009887: animal organ morphogenesis	7.11E-03
76	GO:0070588: calcium ion transmembrane transport	7.69E-03
77	GO:0046854: phosphatidylinositol phosphorylation	7.69E-03
78	GO:0048367: shoot system development	7.86E-03
79	GO:0009626: plant-type hypersensitive response	8.11E-03
80	GO:0006468: protein phosphorylation	8.81E-03
81	GO:0009116: nucleoside metabolic process	8.92E-03
82	GO:0009695: jasmonic acid biosynthetic process	9.56E-03
83	GO:0016998: cell wall macromolecule catabolic process	1.02E-02
84	GO:0031348: negative regulation of defense response	1.09E-02
85	GO:0006012: galactose metabolic process	1.16E-02
86	GO:0006817: phosphate ion transport	1.23E-02
87	GO:0051028: mRNA transport	1.30E-02
88	GO:0042391: regulation of membrane potential	1.37E-02
89	GO:0010154: fruit development	1.45E-02
90	GO:0009737: response to abscisic acid	1.47E-02
91	GO:0010150: leaf senescence	1.59E-02
92	GO:0010193: response to ozone	1.68E-02
93	GO:0006635: fatty acid beta-oxidation	1.68E-02
94	GO:0071554: cell wall organization or biogenesis	1.68E-02
95	GO:0009617: response to bacterium	1.90E-02
96	GO:0009738: abscisic acid-activated signaling pathway	1.98E-02
97	GO:0015031: protein transport	2.06E-02
98	GO:0009816: defense response to bacterium, incompatible interaction	2.27E-02
99	GO:0042128: nitrate assimilation	2.36E-02
100	GO:0006950: response to stress	2.45E-02
101	GO:0016311: dephosphorylation	2.55E-02
102	GO:0009817: defense response to fungus, incompatible interaction	2.64E-02
103	GO:0009407: toxin catabolic process	2.83E-02
104	GO:0010119: regulation of stomatal movement	2.93E-02
105	GO:0010043: response to zinc ion	2.93E-02
106	GO:0048527: lateral root development	2.93E-02
107	GO:0006865: amino acid transport	3.02E-02
108	GO:0009867: jasmonic acid mediated signaling pathway	3.12E-02
109	GO:0006099: tricarboxylic acid cycle	3.22E-02
110	GO:0006839: mitochondrial transport	3.43E-02
111	GO:0009636: response to toxic substance	4.06E-02
112	GO:0009846: pollen germination	4.40E-02
113	GO:0042538: hyperosmotic salinity response	4.40E-02
114	GO:0006629: lipid metabolic process	4.49E-02
115	GO:0009809: lignin biosynthetic process	4.62E-02
116	GO:0008152: metabolic process	4.94E-02
117	GO:0006417: regulation of translation	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0015930: glutamate synthase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0051723: protein methylesterase activity	0.00E+00
4	GO:0042030: ATPase inhibitor activity	0.00E+00
5	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
6	GO:0036402: proteasome-activating ATPase activity	4.41E-07
7	GO:0017025: TBP-class protein binding	2.26E-05
8	GO:0005524: ATP binding	4.55E-05
9	GO:0102391: decanoate--CoA ligase activity	7.58E-05
10	GO:0004467: long-chain fatty acid-CoA ligase activity	1.01E-04
11	GO:0004321: fatty-acyl-CoA synthase activity	1.71E-04
12	GO:0016041: glutamate synthase (ferredoxin) activity	1.71E-04
13	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.71E-04
14	GO:0008802: betaine-aldehyde dehydrogenase activity	1.71E-04
15	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.71E-04
16	GO:0016887: ATPase activity	1.82E-04
17	GO:0004061: arylformamidase activity	3.87E-04
18	GO:0015036: disulfide oxidoreductase activity	3.87E-04
19	GO:0004450: isocitrate dehydrogenase (NADP+) activity	3.87E-04
20	GO:0004103: choline kinase activity	3.87E-04
21	GO:0010331: gibberellin binding	3.87E-04
22	GO:0016787: hydrolase activity	4.14E-04
23	GO:0005315: inorganic phosphate transmembrane transporter activity	4.24E-04
24	GO:0004175: endopeptidase activity	4.79E-04
25	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	6.32E-04
26	GO:0015193: L-proline transmembrane transporter activity	6.32E-04
27	GO:0004781: sulfate adenylyltransferase (ATP) activity	6.32E-04
28	GO:0016805: dipeptidase activity	6.32E-04
29	GO:0016656: monodehydroascorbate reductase (NADH) activity	9.04E-04
30	GO:0004300: enoyl-CoA hydratase activity	9.04E-04
31	GO:0004749: ribose phosphate diphosphokinase activity	9.04E-04
32	GO:0008276: protein methyltransferase activity	9.04E-04
33	GO:0009916: alternative oxidase activity	1.20E-03
34	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.20E-03
35	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.52E-03
36	GO:0005496: steroid binding	1.52E-03
37	GO:0051538: 3 iron, 4 sulfur cluster binding	1.52E-03
38	GO:0005471: ATP:ADP antiporter activity	1.52E-03
39	GO:0004356: glutamate-ammonia ligase activity	1.52E-03
40	GO:0010294: abscisic acid glucosyltransferase activity	1.52E-03
41	GO:0004197: cysteine-type endopeptidase activity	1.68E-03
42	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.87E-03
43	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.87E-03
44	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.87E-03
45	GO:0004526: ribonuclease P activity	1.87E-03
46	GO:0003978: UDP-glucose 4-epimerase activity	2.24E-03
47	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.24E-03
48	GO:0004144: diacylglycerol O-acyltransferase activity	2.24E-03
49	GO:0051920: peroxiredoxin activity	2.24E-03
50	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.24E-03
51	GO:0005516: calmodulin binding	2.34E-03
52	GO:0008235: metalloexopeptidase activity	2.64E-03
53	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.64E-03
54	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.64E-03
55	GO:0052747: sinapyl alcohol dehydrogenase activity	3.06E-03
56	GO:0016209: antioxidant activity	3.06E-03
57	GO:0004674: protein serine/threonine kinase activity	3.06E-03
58	GO:0004033: aldo-keto reductase (NADP) activity	3.06E-03
59	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.06E-03
60	GO:0016207: 4-coumarate-CoA ligase activity	3.95E-03
61	GO:0071949: FAD binding	3.95E-03
62	GO:0047617: acyl-CoA hydrolase activity	4.44E-03
63	GO:0030955: potassium ion binding	4.44E-03
64	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.44E-03
65	GO:0004743: pyruvate kinase activity	4.44E-03
66	GO:0000287: magnesium ion binding	4.51E-03
67	GO:0004568: chitinase activity	4.93E-03
68	GO:0008171: O-methyltransferase activity	4.93E-03
69	GO:0004177: aminopeptidase activity	5.45E-03
70	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.98E-03
71	GO:0015114: phosphate ion transmembrane transporter activity	6.54E-03
72	GO:0005388: calcium-transporting ATPase activity	6.54E-03
73	GO:0008234: cysteine-type peptidase activity	7.12E-03
74	GO:0008061: chitin binding	7.69E-03
75	GO:0004190: aspartic-type endopeptidase activity	7.69E-03
76	GO:0030552: cAMP binding	7.69E-03
77	GO:0030553: cGMP binding	7.69E-03
78	GO:0080043: quercetin 3-O-glucosyltransferase activity	8.37E-03
79	GO:0080044: quercetin 7-O-glucosyltransferase activity	8.37E-03
80	GO:0005216: ion channel activity	9.56E-03
81	GO:0004298: threonine-type endopeptidase activity	1.02E-02
82	GO:0008408: 3'-5' exonuclease activity	1.02E-02
83	GO:0016301: kinase activity	1.02E-02
84	GO:0035251: UDP-glucosyltransferase activity	1.02E-02
85	GO:0022891: substrate-specific transmembrane transporter activity	1.16E-02
86	GO:0030170: pyridoxal phosphate binding	1.28E-02
87	GO:0005249: voltage-gated potassium channel activity	1.37E-02
88	GO:0030551: cyclic nucleotide binding	1.37E-02
89	GO:0003824: catalytic activity	1.66E-02
90	GO:0008194: UDP-glycosyltransferase activity	1.78E-02
91	GO:0008237: metallopeptidase activity	2.01E-02
92	GO:0042802: identical protein binding	2.02E-02
93	GO:0016413: O-acetyltransferase activity	2.10E-02
94	GO:0016597: amino acid binding	2.10E-02
95	GO:0051213: dioxygenase activity	2.18E-02
96	GO:0016491: oxidoreductase activity	2.18E-02
97	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.36E-02
98	GO:0004683: calmodulin-dependent protein kinase activity	2.45E-02
99	GO:0004806: triglyceride lipase activity	2.45E-02
100	GO:0030247: polysaccharide binding	2.45E-02
101	GO:0004601: peroxidase activity	2.46E-02
102	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.55E-02
103	GO:0004222: metalloendopeptidase activity	2.83E-02
104	GO:0030145: manganese ion binding	2.93E-02
105	GO:0008233: peptidase activity	3.00E-02
106	GO:0005507: copper ion binding	3.20E-02
107	GO:0003993: acid phosphatase activity	3.22E-02
108	GO:0050661: NADP binding	3.43E-02
109	GO:0004364: glutathione transferase activity	3.64E-02
110	GO:0004722: protein serine/threonine phosphatase activity	4.00E-02
111	GO:0015293: symporter activity	4.06E-02
112	GO:0051287: NAD binding	4.29E-02
113	GO:0005509: calcium ion binding	4.47E-02
114	GO:0003924: GTPase activity	4.49E-02
115	GO:0045330: aspartyl esterase activity	4.97E-02
116	GO:0015171: amino acid transmembrane transporter activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005777: peroxisome	5.40E-08
3	GO:0005829: cytosol	2.24E-07
4	GO:0000502: proteasome complex	2.27E-07
5	GO:0031597: cytosolic proteasome complex	7.77E-07
6	GO:0031595: nuclear proteasome complex	1.27E-06
7	GO:0008540: proteasome regulatory particle, base subcomplex	5.50E-06
8	GO:0005886: plasma membrane	5.85E-06
9	GO:0008541: proteasome regulatory particle, lid subcomplex	3.25E-04
10	GO:0031314: extrinsic component of mitochondrial inner membrane	3.87E-04
11	GO:0005764: lysosome	4.79E-04
12	GO:0005782: peroxisomal matrix	6.32E-04
13	GO:0030139: endocytic vesicle	6.32E-04
14	GO:0032585: multivesicular body membrane	9.04E-04
15	GO:0005737: cytoplasm	1.76E-03
16	GO:0019773: proteasome core complex, alpha-subunit complex	3.50E-03
17	GO:0005773: vacuole	3.65E-03
18	GO:0031901: early endosome membrane	3.95E-03
19	GO:0005635: nuclear envelope	6.89E-03
20	GO:0005783: endoplasmic reticulum	6.95E-03
21	GO:0030176: integral component of endoplasmic reticulum membrane	7.69E-03
22	GO:0005834: heterotrimeric G-protein complex	8.11E-03
23	GO:0005769: early endosome	8.30E-03
24	GO:0005743: mitochondrial inner membrane	9.08E-03
25	GO:0070469: respiratory chain	9.56E-03
26	GO:0005839: proteasome core complex	1.02E-02
27	GO:0043231: intracellular membrane-bounded organelle	1.13E-02
28	GO:0048046: apoplast	1.31E-02
29	GO:0005887: integral component of plasma membrane	1.47E-02
30	GO:0005618: cell wall	1.54E-02
31	GO:0005615: extracellular space	1.78E-02
32	GO:0071944: cell periphery	1.84E-02
33	GO:0022626: cytosolic ribosome	1.95E-02
34	GO:0005778: peroxisomal membrane	2.01E-02
35	GO:0005643: nuclear pore	2.64E-02
36	GO:0005819: spindle	3.33E-02
37	GO:0031966: mitochondrial membrane	4.40E-02