co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G52470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009722: detection of cytokinin stimulus	0.00E+00
2	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
3	GO:0071345: cellular response to cytokine stimulus	0.00E+00
4	GO:0042178: xenobiotic catabolic process	0.00E+00
5	GO:0010336: gibberellic acid homeostasis	0.00E+00
6	GO:0006520: cellular amino acid metabolic process	6.44E-06
7	GO:0006559: L-phenylalanine catabolic process	6.91E-06
8	GO:0010218: response to far red light	3.13E-05
9	GO:0051555: flavonol biosynthetic process	4.42E-05
10	GO:0006805: xenobiotic metabolic process	4.88E-05
11	GO:0006659: phosphatidylserine biosynthetic process	4.88E-05
12	GO:0019605: butyrate metabolic process	4.88E-05
13	GO:0006083: acetate metabolic process	4.88E-05
14	GO:0019388: galactose catabolic process	1.20E-04
15	GO:0008152: metabolic process	1.74E-04
16	GO:0009411: response to UV	1.79E-04
17	GO:0006651: diacylglycerol biosynthetic process	2.06E-04
18	GO:0010253: UDP-rhamnose biosynthetic process	2.06E-04
19	GO:0009963: positive regulation of flavonoid biosynthetic process	3.01E-04
20	GO:0009650: UV protection	3.01E-04
21	GO:0009590: detection of gravity	3.01E-04
22	GO:0006572: tyrosine catabolic process	3.01E-04
23	GO:0009765: photosynthesis, light harvesting	4.04E-04
24	GO:0006021: inositol biosynthetic process	4.04E-04
25	GO:0006097: glyoxylate cycle	5.13E-04
26	GO:0016094: polyprenol biosynthetic process	5.13E-04
27	GO:0071493: cellular response to UV-B	5.13E-04
28	GO:0019408: dolichol biosynthetic process	5.13E-04
29	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	6.29E-04
30	GO:0010315: auxin efflux	6.29E-04
31	GO:0006796: phosphate-containing compound metabolic process	6.29E-04
32	GO:0009759: indole glucosinolate biosynthetic process	6.29E-04
33	GO:0017148: negative regulation of translation	7.50E-04
34	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	8.75E-04
35	GO:1900056: negative regulation of leaf senescence	8.75E-04
36	GO:0010114: response to red light	9.27E-04
37	GO:0005978: glycogen biosynthetic process	1.01E-03
38	GO:0009636: response to toxic substance	1.04E-03
39	GO:0010120: camalexin biosynthetic process	1.14E-03
40	GO:0009809: lignin biosynthetic process	1.23E-03
41	GO:0009753: response to jasmonic acid	1.28E-03
42	GO:0009909: regulation of flower development	1.36E-03
43	GO:0010018: far-red light signaling pathway	1.43E-03
44	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.43E-03
45	GO:0009698: phenylpropanoid metabolic process	1.75E-03
46	GO:0000272: polysaccharide catabolic process	1.75E-03
47	GO:0048229: gametophyte development	1.75E-03
48	GO:0006006: glucose metabolic process	2.08E-03
49	GO:0009934: regulation of meristem structural organization	2.26E-03
50	GO:0010223: secondary shoot formation	2.26E-03
51	GO:0009058: biosynthetic process	2.27E-03
52	GO:0009225: nucleotide-sugar metabolic process	2.44E-03
53	GO:0009611: response to wounding	2.48E-03
54	GO:0007623: circadian rhythm	2.96E-03
55	GO:0019953: sexual reproduction	3.01E-03
56	GO:0009768: photosynthesis, light harvesting in photosystem I	3.01E-03
57	GO:0019915: lipid storage	3.20E-03
58	GO:0006366: transcription from RNA polymerase II promoter	3.20E-03
59	GO:0006730: one-carbon metabolic process	3.41E-03
60	GO:0010584: pollen exine formation	3.82E-03
61	GO:0042127: regulation of cell proliferation	3.82E-03
62	GO:0016117: carotenoid biosynthetic process	4.04E-03
63	GO:0042335: cuticle development	4.26E-03
64	GO:0007059: chromosome segregation	4.71E-03
65	GO:0009791: post-embryonic development	4.94E-03
66	GO:0019252: starch biosynthetic process	4.94E-03
67	GO:0008654: phospholipid biosynthetic process	4.94E-03
68	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	5.18E-03
69	GO:0007264: small GTPase mediated signal transduction	5.42E-03
70	GO:0080167: response to karrikin	5.63E-03
71	GO:0016125: sterol metabolic process	5.91E-03
72	GO:0009828: plant-type cell wall loosening	5.91E-03
73	GO:0051607: defense response to virus	6.42E-03
74	GO:0042128: nitrate assimilation	7.20E-03
75	GO:0048573: photoperiodism, flowering	7.48E-03
76	GO:0018298: protein-chromophore linkage	8.03E-03
77	GO:0009751: response to salicylic acid	8.19E-03
78	GO:0009813: flavonoid biosynthetic process	8.31E-03
79	GO:0009407: toxin catabolic process	8.60E-03
80	GO:0010119: regulation of stomatal movement	8.88E-03
81	GO:0009637: response to blue light	9.47E-03
82	GO:0006631: fatty acid metabolic process	1.07E-02
83	GO:0009926: auxin polar transport	1.13E-02
84	GO:0031347: regulation of defense response	1.30E-02
85	GO:0006486: protein glycosylation	1.40E-02
86	GO:0010224: response to UV-B	1.43E-02
87	GO:0006857: oligopeptide transport	1.47E-02
88	GO:0009416: response to light stimulus	1.48E-02
89	GO:0042545: cell wall modification	1.76E-02
90	GO:0009845: seed germination	2.23E-02
91	GO:0045490: pectin catabolic process	2.65E-02
92	GO:0009739: response to gibberellin	2.87E-02
93	GO:0071555: cell wall organization	3.00E-02
94	GO:0030154: cell differentiation	3.27E-02
95	GO:0009733: response to auxin	3.37E-02
96	GO:0009826: unidimensional cell growth	3.52E-02
97	GO:0006355: regulation of transcription, DNA-templated	3.80E-02
98	GO:0009723: response to ethylene	4.01E-02
99	GO:0010200: response to chitin	4.31E-02
100	GO:0006810: transport	4.39E-02
101	GO:0005975: carbohydrate metabolic process	4.54E-02
102	GO:0015979: photosynthesis	4.62E-02
103	GO:0045892: negative regulation of transcription, DNA-templated	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
2	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
3	GO:0050505: hydroquinone glucosyltransferase activity	0.00E+00
4	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	5.64E-07
5	GO:0003987: acetate-CoA ligase activity	4.88E-05
6	GO:0010313: phytochrome binding	4.88E-05
7	GO:0047760: butyrate-CoA ligase activity	4.88E-05
8	GO:0004837: tyrosine decarboxylase activity	4.88E-05
9	GO:0016868: intramolecular transferase activity, phosphotransferases	1.20E-04
10	GO:0008460: dTDP-glucose 4,6-dehydratase activity	1.20E-04
11	GO:0051879: Hsp90 protein binding	1.20E-04
12	GO:0010280: UDP-L-rhamnose synthase activity	1.20E-04
13	GO:0050377: UDP-glucose 4,6-dehydratase activity	1.20E-04
14	GO:0004512: inositol-3-phosphate synthase activity	1.20E-04
15	GO:0004614: phosphoglucomutase activity	1.20E-04
16	GO:0008253: 5'-nucleotidase activity	2.06E-04
17	GO:0030170: pyridoxal phosphate binding	2.39E-04
18	GO:0048027: mRNA 5'-UTR binding	3.01E-04
19	GO:0008194: UDP-glycosyltransferase activity	3.69E-04
20	GO:0045430: chalcone isomerase activity	4.04E-04
21	GO:0045547: dehydrodolichyl diphosphate synthase activity	5.13E-04
22	GO:0002094: polyprenyltransferase activity	5.13E-04
23	GO:0102229: amylopectin maltohydrolase activity	6.29E-04
24	GO:0016208: AMP binding	6.29E-04
25	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	6.29E-04
26	GO:0008195: phosphatidate phosphatase activity	7.50E-04
27	GO:0016161: beta-amylase activity	7.50E-04
28	GO:0004427: inorganic diphosphatase activity	8.75E-04
29	GO:0016621: cinnamoyl-CoA reductase activity	8.75E-04
30	GO:0043295: glutathione binding	8.75E-04
31	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.01E-03
32	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.14E-03
33	GO:0016207: 4-coumarate-CoA ligase activity	1.28E-03
34	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.58E-03
35	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.58E-03
36	GO:0004089: carbonate dehydratase activity	2.08E-03
37	GO:0016758: transferase activity, transferring hexosyl groups	2.10E-03
38	GO:0031409: pigment binding	2.62E-03
39	GO:0001046: core promoter sequence-specific DNA binding	2.81E-03
40	GO:0035251: UDP-glucosyltransferase activity	3.20E-03
41	GO:0000287: magnesium ion binding	4.47E-03
42	GO:0016853: isomerase activity	4.71E-03
43	GO:0004518: nuclease activity	5.42E-03
44	GO:0008483: transaminase activity	6.16E-03
45	GO:0016168: chlorophyll binding	6.94E-03
46	GO:0016757: transferase activity, transferring glycosyl groups	7.00E-03
47	GO:0004806: triglyceride lipase activity	7.48E-03
48	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	8.88E-03
49	GO:0004364: glutathione transferase activity	1.10E-02
50	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.44E-02
51	GO:0045330: aspartyl esterase activity	1.50E-02
52	GO:0004650: polygalacturonase activity	1.68E-02
53	GO:0016874: ligase activity	1.72E-02
54	GO:0030599: pectinesterase activity	1.72E-02
55	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.14E-02
56	GO:0016829: lyase activity	2.23E-02
57	GO:0046910: pectinesterase inhibitor activity	2.52E-02
58	GO:0008017: microtubule binding	2.73E-02
59	GO:0005215: transporter activity	3.32E-02
60	GO:0046982: protein heterodimerization activity	3.56E-02
61	GO:0004497: monooxygenase activity	4.21E-02
62	GO:0043565: sequence-specific DNA binding	4.58E-02
63	GO:0020037: heme binding	4.71E-02
64	GO:0004871: signal transducer activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0097708: intracellular vesicle	0.00E+00
2	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.06E-04
3	GO:0005765: lysosomal membrane	1.75E-03
4	GO:0030076: light-harvesting complex	2.44E-03
5	GO:0009522: photosystem I	4.71E-03
6	GO:0009523: photosystem II	4.94E-03
7	GO:0071944: cell periphery	5.66E-03
8	GO:0010319: stromule	6.16E-03
9	GO:0043231: intracellular membrane-bounded organelle	9.16E-03
10	GO:0005819: spindle	1.01E-02
11	GO:0031902: late endosome membrane	1.07E-02
12	GO:0005829: cytosol	1.71E-02
13	GO:0010287: plastoglobule	2.02E-02
14	GO:0009543: chloroplast thylakoid lumen	2.10E-02
15	GO:0031225: anchored component of membrane	2.31E-02
16	GO:0009705: plant-type vacuole membrane	2.65E-02
17	GO:0009507: chloroplast	3.55E-02
18	GO:0009941: chloroplast envelope	4.13E-02
19	GO:0005737: cytoplasm	4.20E-02