Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G51490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071281: cellular response to iron ion2.96E-05
2GO:0071732: cellular response to nitric oxide1.75E-04
3GO:0015675: nickel cation transport3.05E-04
4GO:0071369: cellular response to ethylene stimulus3.24E-04
5GO:0009113: purine nucleobase biosynthetic process4.41E-04
6GO:0006424: glutamyl-tRNA aminoacylation4.41E-04
7GO:1902358: sulfate transmembrane transport4.41E-04
8GO:0010222: stem vascular tissue pattern formation5.87E-04
9GO:0010023: proanthocyanidin biosynthetic process5.87E-04
10GO:0006357: regulation of transcription from RNA polymerase II promoter5.89E-04
11GO:0015691: cadmium ion transport9.07E-04
12GO:0006828: manganese ion transport9.07E-04
13GO:0006826: iron ion transport1.26E-03
14GO:0006972: hyperosmotic response1.66E-03
15GO:0006189: 'de novo' IMP biosynthetic process1.87E-03
16GO:0010345: suberin biosynthetic process1.87E-03
17GO:0071577: zinc II ion transmembrane transport2.09E-03
18GO:0010018: far-red light signaling pathway2.09E-03
19GO:0006857: oligopeptide transport2.29E-03
20GO:0006879: cellular iron ion homeostasis2.56E-03
21GO:0030154: cell differentiation3.01E-03
22GO:0046274: lignin catabolic process3.06E-03
23GO:0006829: zinc II ion transport3.06E-03
24GO:0010588: cotyledon vascular tissue pattern formation3.06E-03
25GO:0006541: glutamine metabolic process3.32E-03
26GO:0070588: calcium ion transmembrane transport3.59E-03
27GO:0006863: purine nucleobase transport3.86E-03
28GO:0009833: plant-type primary cell wall biogenesis3.86E-03
29GO:0009116: nucleoside metabolic process4.15E-03
30GO:0007059: chromosome segregation6.99E-03
31GO:0055072: iron ion homeostasis7.34E-03
32GO:0009639: response to red or far red light8.79E-03
33GO:0042128: nitrate assimilation1.07E-02
34GO:0030244: cellulose biosynthetic process1.20E-02
35GO:0009832: plant-type cell wall biogenesis1.24E-02
36GO:0009813: flavonoid biosynthetic process1.24E-02
37GO:0030001: metal ion transport1.55E-02
38GO:0031347: regulation of defense response1.94E-02
39GO:0009664: plant-type cell wall organization1.99E-02
40GO:0009585: red, far-red light phototransduction2.10E-02
41GO:0042545: cell wall modification2.64E-02
42GO:0009624: response to nematode2.69E-02
43GO:0055085: transmembrane transport3.34E-02
44GO:0006511: ubiquitin-dependent protein catabolic process3.57E-02
45GO:0006633: fatty acid biosynthetic process3.72E-02
46GO:0045490: pectin catabolic process3.98E-02
47GO:0009617: response to bacterium4.51E-02
RankGO TermAdjusted P value
1GO:0008271: secondary active sulfate transmembrane transporter activity4.70E-05
2GO:0015088: copper uptake transmembrane transporter activity7.58E-05
3GO:0015116: sulfate transmembrane transporter activity1.18E-04
4GO:0004044: amidophosphoribosyltransferase activity1.81E-04
5GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.73E-04
6GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.25E-04
7GO:0015086: cadmium ion transmembrane transporter activity4.41E-04
8GO:0042626: ATPase activity, coupled to transmembrane movement of substances8.92E-04
9GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity1.66E-03
10GO:0103095: wax ester synthase activity1.66E-03
11GO:0015293: symporter activity1.80E-03
12GO:0005381: iron ion transmembrane transporter activity2.09E-03
13GO:0005384: manganese ion transmembrane transporter activity2.09E-03
14GO:0044212: transcription regulatory region DNA binding2.64E-03
15GO:0015198: oligopeptide transporter activity2.80E-03
16GO:0052716: hydroquinone:oxygen oxidoreductase activity2.80E-03
17GO:0005388: calcium-transporting ATPase activity3.06E-03
18GO:0051536: iron-sulfur cluster binding4.15E-03
19GO:0005385: zinc ion transmembrane transporter activity4.15E-03
20GO:0005345: purine nucleobase transmembrane transporter activity4.43E-03
21GO:0004540: ribonuclease activity4.73E-03
22GO:0016760: cellulose synthase (UDP-forming) activity5.34E-03
23GO:0005199: structural constituent of cell wall6.64E-03
24GO:0016759: cellulose synthase activity8.79E-03
25GO:0016722: oxidoreductase activity, oxidizing metal ions9.17E-03
26GO:0008236: serine-type peptidase activity1.16E-02
27GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.42E-02
28GO:0016298: lipase activity2.15E-02
29GO:0045330: aspartyl esterase activity2.25E-02
30GO:0030599: pectinesterase activity2.58E-02
31GO:0022857: transmembrane transporter activity2.58E-02
32GO:0016746: transferase activity, transferring acyl groups2.75E-02
33GO:0043565: sequence-specific DNA binding3.08E-02
34GO:0004252: serine-type endopeptidase activity3.41E-02
35GO:0008017: microtubule binding4.11E-02
RankGO TermAdjusted P value
1GO:0005887: integral component of plasma membrane3.56E-03
2GO:0005769: early endosome3.86E-03
3GO:0031225: anchored component of membrane8.79E-03
4GO:0090406: pollen tube1.70E-02
5GO:0016607: nuclear speck2.42E-02
6GO:0046658: anchored component of plasma membrane4.85E-02
Gene type



Gene DE type