co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G51390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0005997: xylulose metabolic process	0.00E+00
2	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
3	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
4	GO:0071311: cellular response to acetate	0.00E+00
5	GO:0071260: cellular response to mechanical stimulus	0.00E+00
6	GO:0010203: response to very low fluence red light stimulus	0.00E+00
7	GO:0042906: xanthine transport	0.00E+00
8	GO:0043171: peptide catabolic process	0.00E+00
9	GO:0010378: temperature compensation of the circadian clock	0.00E+00
10	GO:0009768: photosynthesis, light harvesting in photosystem I	2.74E-10
11	GO:0018298: protein-chromophore linkage	3.72E-08
12	GO:0010218: response to far red light	5.13E-08
13	GO:0009409: response to cold	1.04E-06
14	GO:0009645: response to low light intensity stimulus	1.92E-06
15	GO:0009817: defense response to fungus, incompatible interaction	3.24E-05
16	GO:0000380: alternative mRNA splicing, via spliceosome	4.82E-05
17	GO:0009637: response to blue light	5.15E-05
18	GO:0009416: response to light stimulus	7.58E-05
19	GO:0010114: response to red light	8.29E-05
20	GO:0007623: circadian rhythm	8.40E-05
21	GO:0009644: response to high light intensity	9.59E-05
22	GO:0010161: red light signaling pathway	1.31E-04
23	GO:0009769: photosynthesis, light harvesting in photosystem II	1.31E-04
24	GO:0015812: gamma-aminobutyric acid transport	2.02E-04
25	GO:0032958: inositol phosphate biosynthetic process	2.02E-04
26	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	2.02E-04
27	GO:0034472: snRNA 3'-end processing	2.02E-04
28	GO:0010496: intercellular transport	2.02E-04
29	GO:1990641: response to iron ion starvation	2.02E-04
30	GO:0015979: photosynthesis	4.00E-04
31	GO:0015914: phospholipid transport	4.52E-04
32	GO:0015720: allantoin transport	4.52E-04
33	GO:0090057: root radial pattern formation	4.52E-04
34	GO:0015857: uracil transport	4.52E-04
35	GO:0030259: lipid glycosylation	4.52E-04
36	GO:0051170: nuclear import	4.52E-04
37	GO:0006101: citrate metabolic process	4.52E-04
38	GO:0009737: response to abscisic acid	7.35E-04
39	GO:0071705: nitrogen compound transport	7.36E-04
40	GO:0017006: protein-tetrapyrrole linkage	7.36E-04
41	GO:0072661: protein targeting to plasma membrane	7.36E-04
42	GO:1902448: positive regulation of shade avoidance	7.36E-04
43	GO:0042344: indole glucosinolate catabolic process	7.36E-04
44	GO:0006598: polyamine catabolic process	7.36E-04
45	GO:0071230: cellular response to amino acid stimulus	7.36E-04
46	GO:0042542: response to hydrogen peroxide	7.55E-04
47	GO:0009640: photomorphogenesis	7.94E-04
48	GO:0008643: carbohydrate transport	8.75E-04
49	GO:0048511: rhythmic process	9.94E-04
50	GO:0006020: inositol metabolic process	1.05E-03
51	GO:0010601: positive regulation of auxin biosynthetic process	1.05E-03
52	GO:0009584: detection of visible light	1.05E-03
53	GO:0044211: CTP salvage	1.05E-03
54	GO:0015749: monosaccharide transport	1.05E-03
55	GO:1901332: negative regulation of lateral root development	1.05E-03
56	GO:0010017: red or far-red light signaling pathway	1.08E-03
57	GO:0009585: red, far-red light phototransduction	1.15E-03
58	GO:0006646: phosphatidylethanolamine biosynthetic process	1.40E-03
59	GO:0015743: malate transport	1.40E-03
60	GO:0009765: photosynthesis, light harvesting	1.40E-03
61	GO:2000306: positive regulation of photomorphogenesis	1.40E-03
62	GO:0010600: regulation of auxin biosynthetic process	1.40E-03
63	GO:0030104: water homeostasis	1.40E-03
64	GO:0044206: UMP salvage	1.40E-03
65	GO:0009414: response to water deprivation	1.58E-03
66	GO:0080167: response to karrikin	1.64E-03
67	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.78E-03
68	GO:0006656: phosphatidylcholine biosynthetic process	1.78E-03
69	GO:0043097: pyrimidine nucleoside salvage	1.78E-03
70	GO:0009651: response to salt stress	2.17E-03
71	GO:0009635: response to herbicide	2.19E-03
72	GO:0045962: positive regulation of development, heterochronic	2.19E-03
73	GO:0006206: pyrimidine nucleobase metabolic process	2.19E-03
74	GO:0017148: negative regulation of translation	2.63E-03
75	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.63E-03
76	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.63E-03
77	GO:0010038: response to metal ion	3.09E-03
78	GO:0010044: response to aluminum ion	3.09E-03
79	GO:0048437: floral organ development	3.09E-03
80	GO:0006950: response to stress	3.35E-03
81	GO:0009415: response to water	3.59E-03
82	GO:0009704: de-etiolation	3.59E-03
83	GO:0032508: DNA duplex unwinding	3.59E-03
84	GO:0006102: isocitrate metabolic process	3.59E-03
85	GO:0009061: anaerobic respiration	3.59E-03
86	GO:0010928: regulation of auxin mediated signaling pathway	3.59E-03
87	GO:0006355: regulation of transcription, DNA-templated	3.75E-03
88	GO:0000160: phosphorelay signal transduction system	3.89E-03
89	GO:0010099: regulation of photomorphogenesis	4.10E-03
90	GO:0009827: plant-type cell wall modification	4.10E-03
91	GO:0001510: RNA methylation	4.10E-03
92	GO:0010043: response to zinc ion	4.28E-03
93	GO:0010119: regulation of stomatal movement	4.28E-03
94	GO:0009631: cold acclimation	4.28E-03
95	GO:0046685: response to arsenic-containing substance	4.65E-03
96	GO:0090333: regulation of stomatal closure	4.65E-03
97	GO:0045087: innate immune response	4.69E-03
98	GO:0009638: phototropism	5.21E-03
99	GO:0030042: actin filament depolymerization	5.21E-03
100	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.21E-03
101	GO:0009641: shade avoidance	5.80E-03
102	GO:0009970: cellular response to sulfate starvation	5.80E-03
103	GO:0055062: phosphate ion homeostasis	5.80E-03
104	GO:0006995: cellular response to nitrogen starvation	5.80E-03
105	GO:0006816: calcium ion transport	6.41E-03
106	GO:0009682: induced systemic resistance	6.41E-03
107	GO:0052544: defense response by callose deposition in cell wall	6.41E-03
108	GO:0006970: response to osmotic stress	6.84E-03
109	GO:0016925: protein sumoylation	7.04E-03
110	GO:0009718: anthocyanin-containing compound biosynthetic process	7.70E-03
111	GO:0035556: intracellular signal transduction	7.70E-03
112	GO:0007015: actin filament organization	8.37E-03
113	GO:0009266: response to temperature stimulus	8.37E-03
114	GO:0090351: seedling development	9.07E-03
115	GO:0019853: L-ascorbic acid biosynthetic process	9.07E-03
116	GO:0006406: mRNA export from nucleus	1.05E-02
117	GO:0016575: histone deacetylation	1.13E-02
118	GO:0006874: cellular calcium ion homeostasis	1.13E-02
119	GO:0009695: jasmonic acid biosynthetic process	1.13E-02
120	GO:0003333: amino acid transmembrane transport	1.21E-02
121	GO:0061077: chaperone-mediated protein folding	1.21E-02
122	GO:0009269: response to desiccation	1.21E-02
123	GO:0005975: carbohydrate metabolic process	1.23E-02
124	GO:0019748: secondary metabolic process	1.29E-02
125	GO:0009408: response to heat	1.34E-02
126	GO:0006012: galactose metabolic process	1.37E-02
127	GO:0071215: cellular response to abscisic acid stimulus	1.37E-02
128	GO:0019722: calcium-mediated signaling	1.45E-02
129	GO:0009058: biosynthetic process	1.54E-02
130	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.54E-02
131	GO:0070417: cellular response to cold	1.54E-02
132	GO:0080022: primary root development	1.62E-02
133	GO:0034220: ion transmembrane transport	1.62E-02
134	GO:0010501: RNA secondary structure unwinding	1.62E-02
135	GO:0010118: stomatal movement	1.62E-02
136	GO:0046323: glucose import	1.71E-02
137	GO:0006814: sodium ion transport	1.80E-02
138	GO:0042752: regulation of circadian rhythm	1.80E-02
139	GO:0008654: phospholipid biosynthetic process	1.89E-02
140	GO:0009556: microsporogenesis	1.89E-02
141	GO:0006635: fatty acid beta-oxidation	1.99E-02
142	GO:0006351: transcription, DNA-templated	1.99E-02
143	GO:0009630: gravitropism	2.08E-02
144	GO:0010228: vegetative to reproductive phase transition of meristem	2.11E-02
145	GO:0007165: signal transduction	2.11E-02
146	GO:1901657: glycosyl compound metabolic process	2.18E-02
147	GO:0019760: glucosinolate metabolic process	2.28E-02
148	GO:0010286: heat acclimation	2.38E-02
149	GO:0009617: response to bacterium	2.40E-02
150	GO:0009735: response to cytokinin	2.48E-02
151	GO:0009738: abscisic acid-activated signaling pathway	2.66E-02
152	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.69E-02
153	GO:0010029: regulation of seed germination	2.69E-02
154	GO:0048573: photoperiodism, flowering	2.90E-02
155	GO:0015995: chlorophyll biosynthetic process	2.90E-02
156	GO:0048481: plant ovule development	3.12E-02
157	GO:0006811: ion transport	3.35E-02
158	GO:0055085: transmembrane transport	3.72E-02
159	GO:0006099: tricarboxylic acid cycle	3.81E-02
160	GO:0016567: protein ubiquitination	3.97E-02
161	GO:0006511: ubiquitin-dependent protein catabolic process	4.04E-02
162	GO:0009926: auxin polar transport	4.42E-02
163	GO:0051707: response to other organism	4.42E-02
164	GO:0006952: defense response	4.47E-02
165	GO:0045892: negative regulation of transcription, DNA-templated	4.68E-02
166	GO:0009965: leaf morphogenesis	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0015276: ligand-gated ion channel activity	0.00E+00
3	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
4	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
5	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
6	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
7	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
8	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
9	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
10	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
11	GO:0080082: esculin beta-glucosidase activity	0.00E+00
12	GO:0004567: beta-mannosidase activity	0.00E+00
13	GO:0031409: pigment binding	1.32E-10
14	GO:0016168: chlorophyll binding	1.86E-08
15	GO:0005253: anion channel activity	3.00E-05
16	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	2.02E-04
17	GO:0030275: LRR domain binding	2.02E-04
18	GO:0031516: far-red light photoreceptor activity	2.02E-04
19	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	2.02E-04
20	GO:0009679: hexose:proton symporter activity	2.02E-04
21	GO:0000829: inositol heptakisphosphate kinase activity	2.02E-04
22	GO:0010013: N-1-naphthylphthalamic acid binding	2.02E-04
23	GO:0080079: cellobiose glucosidase activity	2.02E-04
24	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.02E-04
25	GO:0008066: glutamate receptor activity	2.02E-04
26	GO:0000828: inositol hexakisphosphate kinase activity	2.02E-04
27	GO:0004856: xylulokinase activity	2.02E-04
28	GO:0070006: metalloaminopeptidase activity	2.02E-04
29	GO:0004177: aminopeptidase activity	4.10E-04
30	GO:0015180: L-alanine transmembrane transporter activity	4.52E-04
31	GO:0005274: allantoin uptake transmembrane transporter activity	4.52E-04
32	GO:0009883: red or far-red light photoreceptor activity	4.52E-04
33	GO:0004609: phosphatidylserine decarboxylase activity	4.52E-04
34	GO:0003994: aconitate hydratase activity	4.52E-04
35	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	4.52E-04
36	GO:0004839: ubiquitin activating enzyme activity	4.52E-04
37	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	4.52E-04
38	GO:0008020: G-protein coupled photoreceptor activity	7.36E-04
39	GO:0004096: catalase activity	7.36E-04
40	GO:0046592: polyamine oxidase activity	7.36E-04
41	GO:0019948: SUMO activating enzyme activity	7.36E-04
42	GO:0017150: tRNA dihydrouridine synthase activity	7.36E-04
43	GO:0005515: protein binding	9.78E-04
44	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.05E-03
45	GO:0004300: enoyl-CoA hydratase activity	1.05E-03
46	GO:0015189: L-lysine transmembrane transporter activity	1.05E-03
47	GO:0048027: mRNA 5'-UTR binding	1.05E-03
48	GO:0015181: arginine transmembrane transporter activity	1.05E-03
49	GO:0042277: peptide binding	1.40E-03
50	GO:0004845: uracil phosphoribosyltransferase activity	1.40E-03
51	GO:0015210: uracil transmembrane transporter activity	1.40E-03
52	GO:0005313: L-glutamate transmembrane transporter activity	1.40E-03
53	GO:0008526: phosphatidylinositol transporter activity	1.40E-03
54	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.78E-03
55	GO:0015145: monosaccharide transmembrane transporter activity	1.78E-03
56	GO:0008641: small protein activating enzyme activity	1.78E-03
57	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.78E-03
58	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.78E-03
59	GO:0005247: voltage-gated chloride channel activity	2.19E-03
60	GO:0004629: phospholipase C activity	2.19E-03
61	GO:0015562: efflux transmembrane transporter activity	2.19E-03
62	GO:0000293: ferric-chelate reductase activity	2.19E-03
63	GO:0019137: thioglucosidase activity	2.19E-03
64	GO:0000156: phosphorelay response regulator activity	2.25E-03
65	GO:0004435: phosphatidylinositol phospholipase C activity	2.63E-03
66	GO:0070300: phosphatidic acid binding	2.63E-03
67	GO:0004849: uridine kinase activity	2.63E-03
68	GO:0015140: malate transmembrane transporter activity	3.09E-03
69	GO:0102483: scopolin beta-glucosidase activity	3.35E-03
70	GO:0005351: sugar:proton symporter activity	3.47E-03
71	GO:0004033: aldo-keto reductase (NADP) activity	3.59E-03
72	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	4.10E-03
73	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.65E-03
74	GO:0000989: transcription factor activity, transcription factor binding	4.65E-03
75	GO:0008422: beta-glucosidase activity	5.12E-03
76	GO:0004673: protein histidine kinase activity	5.80E-03
77	GO:0047372: acylglycerol lipase activity	6.41E-03
78	GO:0005198: structural molecule activity	6.78E-03
79	GO:0005315: inorganic phosphate transmembrane transporter activity	7.70E-03
80	GO:0000155: phosphorelay sensor kinase activity	7.70E-03
81	GO:0005262: calcium channel activity	7.70E-03
82	GO:0004565: beta-galactosidase activity	7.70E-03
83	GO:0008131: primary amine oxidase activity	8.37E-03
84	GO:0005217: intracellular ligand-gated ion channel activity	9.07E-03
85	GO:0004970: ionotropic glutamate receptor activity	9.07E-03
86	GO:0003712: transcription cofactor activity	9.07E-03
87	GO:0004407: histone deacetylase activity	1.05E-02
88	GO:0008324: cation transmembrane transporter activity	1.13E-02
89	GO:0004672: protein kinase activity	1.16E-02
90	GO:0004707: MAP kinase activity	1.21E-02
91	GO:0008514: organic anion transmembrane transporter activity	1.45E-02
92	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.50E-02
93	GO:0015144: carbohydrate transmembrane transporter activity	1.74E-02
94	GO:0015297: antiporter activity	1.92E-02
95	GO:0004842: ubiquitin-protein transferase activity	3.31E-02
96	GO:0050897: cobalt ion binding	3.46E-02
97	GO:0003729: mRNA binding	3.68E-02
98	GO:0003697: single-stranded DNA binding	3.69E-02
99	GO:0046872: metal ion binding	3.70E-02
100	GO:0008233: peptidase activity	3.79E-02
101	GO:0043565: sequence-specific DNA binding	3.86E-02
102	GO:0004497: monooxygenase activity	3.86E-02
103	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.90E-02
104	GO:0016301: kinase activity	4.03E-02
105	GO:0051539: 4 iron, 4 sulfur cluster binding	4.05E-02
106	GO:0004185: serine-type carboxypeptidase activity	4.42E-02
107	GO:0015293: symporter activity	4.80E-02
108	GO:0042803: protein homodimerization activity	4.82E-02
109	GO:0004871: signal transducer activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0030076: light-harvesting complex	8.91E-09
2	GO:0010287: plastoglobule	1.12E-07
3	GO:0009522: photosystem I	1.55E-07
4	GO:0009523: photosystem II	7.48E-06
5	GO:0005777: peroxisome	1.10E-04
6	GO:0009579: thylakoid	1.23E-04
7	GO:0009534: chloroplast thylakoid	1.26E-04
8	GO:0016021: integral component of membrane	6.48E-04
9	GO:0032586: protein storage vacuole membrane	1.40E-03
10	GO:0009517: PSII associated light-harvesting complex II	1.40E-03
11	GO:0009941: chloroplast envelope	1.73E-03
12	GO:0005851: eukaryotic translation initiation factor 2B complex	2.19E-03
13	GO:0034707: chloride channel complex	2.19E-03
14	GO:0009535: chloroplast thylakoid membrane	2.62E-03
15	GO:0000326: protein storage vacuole	4.10E-03
16	GO:0016020: membrane	4.47E-03
17	GO:0031090: organelle membrane	4.65E-03
18	GO:0005622: intracellular	4.74E-03
19	GO:0016604: nuclear body	5.21E-03
20	GO:0031966: mitochondrial membrane	7.58E-03
21	GO:0005938: cell cortex	7.70E-03
22	GO:0005618: cell wall	9.01E-03
23	GO:0016607: nuclear speck	9.95E-03
24	GO:0009506: plasmodesma	1.03E-02
25	GO:0042651: thylakoid membrane	1.13E-02
26	GO:0015629: actin cytoskeleton	1.37E-02
27	GO:0005623: cell	1.50E-02
28	GO:0000151: ubiquitin ligase complex	3.12E-02
29	GO:0000786: nucleosome	3.58E-02
30	GO:0005773: vacuole	4.13E-02