GO Enrichment Analysis of Co-expressed Genes with
AT3G50970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043171: peptide catabolic process | 0.00E+00 |
| 2 | GO:0010219: regulation of vernalization response | 0.00E+00 |
| 3 | GO:0010378: temperature compensation of the circadian clock | 0.00E+00 |
| 4 | GO:0042906: xanthine transport | 0.00E+00 |
| 5 | GO:0005997: xylulose metabolic process | 0.00E+00 |
| 6 | GO:0007623: circadian rhythm | 7.94E-09 |
| 7 | GO:0009409: response to cold | 3.23E-07 |
| 8 | GO:0009737: response to abscisic acid | 1.90E-05 |
| 9 | GO:0000380: alternative mRNA splicing, via spliceosome | 3.65E-05 |
| 10 | GO:0042542: response to hydrogen peroxide | 4.97E-05 |
| 11 | GO:0098869: cellular oxidant detoxification | 1.01E-04 |
| 12 | GO:0009609: response to symbiotic bacterium | 1.71E-04 |
| 13 | GO:0015812: gamma-aminobutyric acid transport | 1.71E-04 |
| 14 | GO:0032958: inositol phosphate biosynthetic process | 1.71E-04 |
| 15 | GO:0006369: termination of RNA polymerase II transcription | 1.71E-04 |
| 16 | GO:0009414: response to water deprivation | 2.40E-04 |
| 17 | GO:0009970: cellular response to sulfate starvation | 2.80E-04 |
| 18 | GO:0006995: cellular response to nitrogen starvation | 2.80E-04 |
| 19 | GO:0048833: specification of floral organ number | 3.87E-04 |
| 20 | GO:0051170: nuclear import | 3.87E-04 |
| 21 | GO:0015857: uracil transport | 3.87E-04 |
| 22 | GO:0030003: cellular cation homeostasis | 3.87E-04 |
| 23 | GO:0015720: allantoin transport | 3.87E-04 |
| 24 | GO:0042256: mature ribosome assembly | 6.32E-04 |
| 25 | GO:0042344: indole glucosinolate catabolic process | 6.32E-04 |
| 26 | GO:0071705: nitrogen compound transport | 6.32E-04 |
| 27 | GO:0030029: actin filament-based process | 6.32E-04 |
| 28 | GO:0048511: rhythmic process | 7.97E-04 |
| 29 | GO:0009269: response to desiccation | 7.97E-04 |
| 30 | GO:0006020: inositol metabolic process | 9.04E-04 |
| 31 | GO:0010601: positive regulation of auxin biosynthetic process | 9.04E-04 |
| 32 | GO:0015749: monosaccharide transport | 9.04E-04 |
| 33 | GO:1901332: negative regulation of lateral root development | 9.04E-04 |
| 34 | GO:0015743: malate transport | 1.20E-03 |
| 35 | GO:0048442: sepal development | 1.20E-03 |
| 36 | GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain | 1.20E-03 |
| 37 | GO:0006646: phosphatidylethanolamine biosynthetic process | 1.20E-03 |
| 38 | GO:0009651: response to salt stress | 1.22E-03 |
| 39 | GO:0006814: sodium ion transport | 1.37E-03 |
| 40 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 1.52E-03 |
| 41 | GO:0043097: pyrimidine nucleoside salvage | 1.52E-03 |
| 42 | GO:0006206: pyrimidine nucleobase metabolic process | 1.87E-03 |
| 43 | GO:0010286: heat acclimation | 2.01E-03 |
| 44 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 2.24E-03 |
| 45 | GO:0031930: mitochondria-nucleus signaling pathway | 2.24E-03 |
| 46 | GO:0045926: negative regulation of growth | 2.24E-03 |
| 47 | GO:0009861: jasmonic acid and ethylene-dependent systemic resistance | 2.24E-03 |
| 48 | GO:0010555: response to mannitol | 2.24E-03 |
| 49 | GO:0048437: floral organ development | 2.64E-03 |
| 50 | GO:1902074: response to salt | 2.64E-03 |
| 51 | GO:0010038: response to metal ion | 2.64E-03 |
| 52 | GO:0010044: response to aluminum ion | 2.64E-03 |
| 53 | GO:0009817: defense response to fungus, incompatible interaction | 2.94E-03 |
| 54 | GO:0009819: drought recovery | 3.06E-03 |
| 55 | GO:0009415: response to water | 3.06E-03 |
| 56 | GO:0032508: DNA duplex unwinding | 3.06E-03 |
| 57 | GO:0000160: phosphorelay signal transduction system | 3.08E-03 |
| 58 | GO:0006811: ion transport | 3.23E-03 |
| 59 | GO:0010218: response to far red light | 3.23E-03 |
| 60 | GO:0009631: cold acclimation | 3.39E-03 |
| 61 | GO:0010043: response to zinc ion | 3.39E-03 |
| 62 | GO:0010099: regulation of photomorphogenesis | 3.50E-03 |
| 63 | GO:0009827: plant-type cell wall modification | 3.50E-03 |
| 64 | GO:0001510: RNA methylation | 3.50E-03 |
| 65 | GO:0045087: innate immune response | 3.71E-03 |
| 66 | GO:0009637: response to blue light | 3.71E-03 |
| 67 | GO:0046916: cellular transition metal ion homeostasis | 3.95E-03 |
| 68 | GO:0007165: signal transduction | 4.41E-03 |
| 69 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 4.44E-03 |
| 70 | GO:2000280: regulation of root development | 4.44E-03 |
| 71 | GO:0008202: steroid metabolic process | 4.44E-03 |
| 72 | GO:0005982: starch metabolic process | 4.44E-03 |
| 73 | GO:0009738: abscisic acid-activated signaling pathway | 4.71E-03 |
| 74 | GO:0055062: phosphate ion homeostasis | 4.93E-03 |
| 75 | GO:0048441: petal development | 4.93E-03 |
| 76 | GO:0009641: shade avoidance | 4.93E-03 |
| 77 | GO:0009416: response to light stimulus | 4.96E-03 |
| 78 | GO:0006970: response to osmotic stress | 5.07E-03 |
| 79 | GO:0006816: calcium ion transport | 5.45E-03 |
| 80 | GO:0009682: induced systemic resistance | 5.45E-03 |
| 81 | GO:0052544: defense response by callose deposition in cell wall | 5.45E-03 |
| 82 | GO:0016925: protein sumoylation | 5.98E-03 |
| 83 | GO:0009718: anthocyanin-containing compound biosynthetic process | 6.54E-03 |
| 84 | GO:0009266: response to temperature stimulus | 7.11E-03 |
| 85 | GO:0048440: carpel development | 7.11E-03 |
| 86 | GO:0007034: vacuolar transport | 7.11E-03 |
| 87 | GO:0045892: negative regulation of transcription, DNA-templated | 7.78E-03 |
| 88 | GO:0046686: response to cadmium ion | 8.54E-03 |
| 89 | GO:0045333: cellular respiration | 8.92E-03 |
| 90 | GO:0006406: mRNA export from nucleus | 8.92E-03 |
| 91 | GO:0016575: histone deacetylation | 9.56E-03 |
| 92 | GO:0006874: cellular calcium ion homeostasis | 9.56E-03 |
| 93 | GO:0009695: jasmonic acid biosynthetic process | 9.56E-03 |
| 94 | GO:0003333: amino acid transmembrane transport | 1.02E-02 |
| 95 | GO:0010017: red or far-red light signaling pathway | 1.09E-02 |
| 96 | GO:0055114: oxidation-reduction process | 1.13E-02 |
| 97 | GO:0071215: cellular response to abscisic acid stimulus | 1.16E-02 |
| 98 | GO:0048443: stamen development | 1.23E-02 |
| 99 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.30E-02 |
| 100 | GO:0042744: hydrogen peroxide catabolic process | 1.31E-02 |
| 101 | GO:0042631: cellular response to water deprivation | 1.37E-02 |
| 102 | GO:0000226: microtubule cytoskeleton organization | 1.37E-02 |
| 103 | GO:0042391: regulation of membrane potential | 1.37E-02 |
| 104 | GO:0010501: RNA secondary structure unwinding | 1.37E-02 |
| 105 | GO:0010051: xylem and phloem pattern formation | 1.37E-02 |
| 106 | GO:0046323: glucose import | 1.45E-02 |
| 107 | GO:0016036: cellular response to phosphate starvation | 1.48E-02 |
| 108 | GO:0042752: regulation of circadian rhythm | 1.52E-02 |
| 109 | GO:0008654: phospholipid biosynthetic process | 1.60E-02 |
| 110 | GO:0009556: microsporogenesis | 1.60E-02 |
| 111 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.68E-02 |
| 112 | GO:0000302: response to reactive oxygen species | 1.68E-02 |
| 113 | GO:0006635: fatty acid beta-oxidation | 1.68E-02 |
| 114 | GO:0009908: flower development | 1.81E-02 |
| 115 | GO:0009735: response to cytokinin | 1.84E-02 |
| 116 | GO:1901657: glycosyl compound metabolic process | 1.84E-02 |
| 117 | GO:0006355: regulation of transcription, DNA-templated | 1.85E-02 |
| 118 | GO:0010468: regulation of gene expression | 1.90E-02 |
| 119 | GO:0009617: response to bacterium | 1.90E-02 |
| 120 | GO:0019760: glucosinolate metabolic process | 1.93E-02 |
| 121 | GO:0009911: positive regulation of flower development | 2.18E-02 |
| 122 | GO:0035556: intracellular signal transduction | 2.21E-02 |
| 123 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.27E-02 |
| 124 | GO:0010029: regulation of seed germination | 2.27E-02 |
| 125 | GO:0045893: positive regulation of transcription, DNA-templated | 2.45E-02 |
| 126 | GO:0015995: chlorophyll biosynthetic process | 2.45E-02 |
| 127 | GO:0048573: photoperiodism, flowering | 2.45E-02 |
| 128 | GO:0018298: protein-chromophore linkage | 2.64E-02 |
| 129 | GO:0005975: carbohydrate metabolic process | 2.68E-02 |
| 130 | GO:0016567: protein ubiquitination | 2.68E-02 |
| 131 | GO:0055085: transmembrane transport | 2.78E-02 |
| 132 | GO:0010119: regulation of stomatal movement | 2.93E-02 |
| 133 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.02E-02 |
| 134 | GO:0080167: response to karrikin | 3.05E-02 |
| 135 | GO:0016051: carbohydrate biosynthetic process | 3.12E-02 |
| 136 | GO:0044550: secondary metabolite biosynthetic process | 3.32E-02 |
| 137 | GO:0030001: metal ion transport | 3.43E-02 |
| 138 | GO:0009640: photomorphogenesis | 3.74E-02 |
| 139 | GO:0010114: response to red light | 3.74E-02 |
| 140 | GO:0009926: auxin polar transport | 3.74E-02 |
| 141 | GO:0009644: response to high light intensity | 3.96E-02 |
| 142 | GO:0008643: carbohydrate transport | 3.96E-02 |
| 143 | GO:0000165: MAPK cascade | 4.29E-02 |
| 144 | GO:0042538: hyperosmotic salinity response | 4.40E-02 |
| 145 | GO:0006812: cation transport | 4.40E-02 |
| 146 | GO:0009408: response to heat | 4.49E-02 |
| 147 | GO:0009585: red, far-red light phototransduction | 4.62E-02 |
| 148 | GO:0006813: potassium ion transport | 4.62E-02 |
| 149 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.74E-02 |
| 150 | GO:0006979: response to oxidative stress | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 2 | GO:0005272: sodium channel activity | 0.00E+00 |
| 3 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0042907: xanthine transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0047787: delta4-3-oxosteroid 5beta-reductase activity | 0.00E+00 |
| 6 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 7 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 8 | GO:0005358: high-affinity hydrogen:glucose symporter activity | 0.00E+00 |
| 9 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 10 | GO:0016428: tRNA (cytosine-5-)-methyltransferase activity | 0.00E+00 |
| 11 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 12 | GO:0004096: catalase activity | 5.25E-06 |
| 13 | GO:0005253: anion channel activity | 2.25E-05 |
| 14 | GO:0009679: hexose:proton symporter activity | 1.71E-04 |
| 15 | GO:0035671: enone reductase activity | 1.71E-04 |
| 16 | GO:0000829: inositol heptakisphosphate kinase activity | 1.71E-04 |
| 17 | GO:0010013: N-1-naphthylphthalamic acid binding | 1.71E-04 |
| 18 | GO:0080079: cellobiose glucosidase activity | 1.71E-04 |
| 19 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 1.71E-04 |
| 20 | GO:0046870: cadmium ion binding | 1.71E-04 |
| 21 | GO:0000828: inositol hexakisphosphate kinase activity | 1.71E-04 |
| 22 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.71E-04 |
| 23 | GO:0004856: xylulokinase activity | 1.71E-04 |
| 24 | GO:0070006: metalloaminopeptidase activity | 1.71E-04 |
| 25 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 1.71E-04 |
| 26 | GO:0033857: diphosphoinositol-pentakisphosphate kinase activity | 1.71E-04 |
| 27 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 3.87E-04 |
| 28 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 3.87E-04 |
| 29 | GO:0004839: ubiquitin activating enzyme activity | 3.87E-04 |
| 30 | GO:0015180: L-alanine transmembrane transporter activity | 3.87E-04 |
| 31 | GO:0001047: core promoter binding | 3.87E-04 |
| 32 | GO:0032791: lead ion binding | 3.87E-04 |
| 33 | GO:0005274: allantoin uptake transmembrane transporter activity | 3.87E-04 |
| 34 | GO:0004609: phosphatidylserine decarboxylase activity | 3.87E-04 |
| 35 | GO:0019948: SUMO activating enzyme activity | 6.32E-04 |
| 36 | GO:0017150: tRNA dihydrouridine synthase activity | 6.32E-04 |
| 37 | GO:0015189: L-lysine transmembrane transporter activity | 9.04E-04 |
| 38 | GO:0015181: arginine transmembrane transporter activity | 9.04E-04 |
| 39 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 9.04E-04 |
| 40 | GO:0004300: enoyl-CoA hydratase activity | 9.04E-04 |
| 41 | GO:0015210: uracil transmembrane transporter activity | 1.20E-03 |
| 42 | GO:0005313: L-glutamate transmembrane transporter activity | 1.20E-03 |
| 43 | GO:0042277: peptide binding | 1.20E-03 |
| 44 | GO:0009916: alternative oxidase activity | 1.20E-03 |
| 45 | GO:0015145: monosaccharide transmembrane transporter activity | 1.52E-03 |
| 46 | GO:0008641: small protein activating enzyme activity | 1.52E-03 |
| 47 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.52E-03 |
| 48 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.52E-03 |
| 49 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.52E-03 |
| 50 | GO:0000156: phosphorelay response regulator activity | 1.78E-03 |
| 51 | GO:2001070: starch binding | 1.87E-03 |
| 52 | GO:0004629: phospholipase C activity | 1.87E-03 |
| 53 | GO:0015562: efflux transmembrane transporter activity | 1.87E-03 |
| 54 | GO:0000293: ferric-chelate reductase activity | 1.87E-03 |
| 55 | GO:0019137: thioglucosidase activity | 1.87E-03 |
| 56 | GO:0005247: voltage-gated chloride channel activity | 1.87E-03 |
| 57 | GO:0005261: cation channel activity | 2.24E-03 |
| 58 | GO:0004849: uridine kinase activity | 2.24E-03 |
| 59 | GO:0004602: glutathione peroxidase activity | 2.24E-03 |
| 60 | GO:0004435: phosphatidylinositol phospholipase C activity | 2.24E-03 |
| 61 | GO:0005351: sugar:proton symporter activity | 2.58E-03 |
| 62 | GO:0009881: photoreceptor activity | 2.64E-03 |
| 63 | GO:0015140: malate transmembrane transporter activity | 2.64E-03 |
| 64 | GO:0102483: scopolin beta-glucosidase activity | 2.65E-03 |
| 65 | GO:0050897: cobalt ion binding | 3.39E-03 |
| 66 | GO:0005267: potassium channel activity | 3.50E-03 |
| 67 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 3.50E-03 |
| 68 | GO:0001104: RNA polymerase II transcription cofactor activity | 3.50E-03 |
| 69 | GO:0000989: transcription factor activity, transcription factor binding | 3.95E-03 |
| 70 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 3.95E-03 |
| 71 | GO:0008422: beta-glucosidase activity | 4.05E-03 |
| 72 | GO:0004177: aminopeptidase activity | 5.45E-03 |
| 73 | GO:0005262: calcium channel activity | 6.54E-03 |
| 74 | GO:0004565: beta-galactosidase activity | 6.54E-03 |
| 75 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.54E-03 |
| 76 | GO:0030552: cAMP binding | 7.69E-03 |
| 77 | GO:0030553: cGMP binding | 7.69E-03 |
| 78 | GO:0005217: intracellular ligand-gated ion channel activity | 7.69E-03 |
| 79 | GO:0004970: ionotropic glutamate receptor activity | 7.69E-03 |
| 80 | GO:0004407: histone deacetylase activity | 8.92E-03 |
| 81 | GO:0005216: ion channel activity | 9.56E-03 |
| 82 | GO:0008324: cation transmembrane transporter activity | 9.56E-03 |
| 83 | GO:0004707: MAP kinase activity | 1.02E-02 |
| 84 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.02E-02 |
| 85 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.18E-02 |
| 86 | GO:0008514: organic anion transmembrane transporter activity | 1.23E-02 |
| 87 | GO:0005509: calcium ion binding | 1.28E-02 |
| 88 | GO:0030551: cyclic nucleotide binding | 1.37E-02 |
| 89 | GO:0005249: voltage-gated potassium channel activity | 1.37E-02 |
| 90 | GO:0015144: carbohydrate transmembrane transporter activity | 1.38E-02 |
| 91 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.45E-02 |
| 92 | GO:0005515: protein binding | 1.47E-02 |
| 93 | GO:0005200: structural constituent of cytoskeleton | 2.01E-02 |
| 94 | GO:0030247: polysaccharide binding | 2.45E-02 |
| 95 | GO:0005096: GTPase activator activity | 2.73E-02 |
| 96 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.83E-02 |
| 97 | GO:0020037: heme binding | 2.84E-02 |
| 98 | GO:0004497: monooxygenase activity | 3.05E-02 |
| 99 | GO:0003697: single-stranded DNA binding | 3.12E-02 |
| 100 | GO:0046872: metal ion binding | 3.73E-02 |
| 101 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.94E-02 |
| 102 | GO:0015293: symporter activity | 4.06E-02 |
| 103 | GO:0003690: double-stranded DNA binding | 4.74E-02 |
| 104 | GO:0015171: amino acid transmembrane transporter activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005777: peroxisome | 5.75E-05 |
| 2 | GO:0043036: starch grain | 3.87E-04 |
| 3 | GO:0005618: cell wall | 6.01E-04 |
| 4 | GO:0016021: integral component of membrane | 1.06E-03 |
| 5 | GO:0032586: protein storage vacuole membrane | 1.20E-03 |
| 6 | GO:0034707: chloride channel complex | 1.87E-03 |
| 7 | GO:0070847: core mediator complex | 1.87E-03 |
| 8 | GO:0005851: eukaryotic translation initiation factor 2B complex | 1.87E-03 |
| 9 | GO:0000815: ESCRT III complex | 2.24E-03 |
| 10 | GO:0005886: plasma membrane | 2.42E-03 |
| 11 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 3.50E-03 |
| 12 | GO:0000326: protein storage vacuole | 3.50E-03 |
| 13 | GO:0031090: organelle membrane | 3.95E-03 |
| 14 | GO:0031966: mitochondrial membrane | 5.99E-03 |
| 15 | GO:0070469: respiratory chain | 9.56E-03 |
| 16 | GO:0031965: nuclear membrane | 1.60E-02 |
| 17 | GO:0016592: mediator complex | 1.76E-02 |
| 18 | GO:0022626: cytosolic ribosome | 1.95E-02 |
| 19 | GO:0009505: plant-type cell wall | 2.02E-02 |
| 20 | GO:0000786: nucleosome | 3.02E-02 |
| 21 | GO:0048046: apoplast | 3.61E-02 |
| 22 | GO:0005622: intracellular | 4.21E-02 |