GO Enrichment Analysis of Co-expressed Genes with
AT3G50820
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0015979: photosynthesis | 1.65E-06 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 3.02E-05 |
| 4 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 8.48E-05 |
| 5 | GO:0016120: carotene biosynthetic process | 3.77E-04 |
| 6 | GO:0009913: epidermal cell differentiation | 4.63E-04 |
| 7 | GO:0009772: photosynthetic electron transport in photosystem II | 6.47E-04 |
| 8 | GO:0009245: lipid A biosynthetic process | 9.49E-04 |
| 9 | GO:0006094: gluconeogenesis | 1.52E-03 |
| 10 | GO:0010207: photosystem II assembly | 1.65E-03 |
| 11 | GO:0007166: cell surface receptor signaling pathway | 2.12E-03 |
| 12 | GO:0009306: protein secretion | 2.78E-03 |
| 13 | GO:0016117: carotenoid biosynthetic process | 2.94E-03 |
| 14 | GO:0000413: protein peptidyl-prolyl isomerization | 3.09E-03 |
| 15 | GO:0015986: ATP synthesis coupled proton transport | 3.42E-03 |
| 16 | GO:0048825: cotyledon development | 3.59E-03 |
| 17 | GO:0016032: viral process | 3.93E-03 |
| 18 | GO:0051607: defense response to virus | 4.64E-03 |
| 19 | GO:0015995: chlorophyll biosynthetic process | 5.40E-03 |
| 20 | GO:0008152: metabolic process | 5.71E-03 |
| 21 | GO:0006364: rRNA processing | 1.00E-02 |
| 22 | GO:0009585: red, far-red light phototransduction | 1.00E-02 |
| 23 | GO:0006096: glycolytic process | 1.13E-02 |
| 24 | GO:0009624: response to nematode | 1.28E-02 |
| 25 | GO:0006396: RNA processing | 1.31E-02 |
| 26 | GO:0009845: seed germination | 1.59E-02 |
| 27 | GO:0006633: fatty acid biosynthetic process | 1.77E-02 |
| 28 | GO:0045490: pectin catabolic process | 1.89E-02 |
| 29 | GO:0042254: ribosome biogenesis | 2.62E-02 |
| 30 | GO:0032259: methylation | 3.85E-02 |
| 31 | GO:0009751: response to salicylic acid | 3.93E-02 |
| 32 | GO:0009737: response to abscisic acid | 3.97E-02 |
| 33 | GO:0009753: response to jasmonic acid | 4.18E-02 |
| 34 | GO:0016310: phosphorylation | 4.57E-02 |
| 35 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 3 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 4 | GO:0031177: phosphopantetheine binding | 4.63E-04 |
| 5 | GO:0004332: fructose-bisphosphate aldolase activity | 4.63E-04 |
| 6 | GO:0000035: acyl binding | 5.53E-04 |
| 7 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 7.44E-04 |
| 8 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.40E-03 |
| 9 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.74E-03 |
| 10 | GO:0043424: protein histidine kinase binding | 2.19E-03 |
| 11 | GO:0004176: ATP-dependent peptidase activity | 2.33E-03 |
| 12 | GO:0030570: pectate lyase activity | 2.63E-03 |
| 13 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 3.25E-03 |
| 14 | GO:0016597: amino acid binding | 4.64E-03 |
| 15 | GO:0016168: chlorophyll binding | 5.02E-03 |
| 16 | GO:0009055: electron carrier activity | 5.56E-03 |
| 17 | GO:0003746: translation elongation factor activity | 6.82E-03 |
| 18 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.06E-03 |
| 19 | GO:0003779: actin binding | 1.26E-02 |
| 20 | GO:0016829: lyase activity | 1.59E-02 |
| 21 | GO:0008565: protein transporter activity | 1.71E-02 |
| 22 | GO:0003743: translation initiation factor activity | 2.11E-02 |
| 23 | GO:0008233: peptidase activity | 2.97E-02 |
| 24 | GO:0004497: monooxygenase activity | 3.01E-02 |
| 25 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 3.42E-02 |
| 26 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 3.70E-02 |
| 27 | GO:0016301: kinase activity | 3.70E-02 |
| 28 | GO:0016787: hydrolase activity | 4.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 1.22E-12 |
| 2 | GO:0009534: chloroplast thylakoid | 4.42E-11 |
| 3 | GO:0009507: chloroplast | 3.67E-10 |
| 4 | GO:0009579: thylakoid | 1.11E-06 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 3.94E-06 |
| 6 | GO:0009941: chloroplast envelope | 4.62E-06 |
| 7 | GO:0031977: thylakoid lumen | 2.42E-05 |
| 8 | GO:0030093: chloroplast photosystem I | 8.48E-05 |
| 9 | GO:0033281: TAT protein transport complex | 1.47E-04 |
| 10 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 4.63E-04 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 6.47E-04 |
| 12 | GO:0009538: photosystem I reaction center | 7.44E-04 |
| 13 | GO:0010287: plastoglobule | 1.29E-03 |
| 14 | GO:0009508: plastid chromosome | 1.52E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 1.65E-03 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 2.19E-03 |
| 17 | GO:0009522: photosystem I | 3.42E-03 |
| 18 | GO:0009523: photosystem II | 3.59E-03 |
| 19 | GO:0019898: extrinsic component of membrane | 3.59E-03 |
| 20 | GO:0010319: stromule | 4.46E-03 |
| 21 | GO:0009295: nucleoid | 4.46E-03 |
| 22 | GO:0009570: chloroplast stroma | 9.13E-03 |
| 23 | GO:0016021: integral component of membrane | 1.02E-02 |
| 24 | GO:0031969: chloroplast membrane | 3.01E-02 |