co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G50740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010398: xylogalacturonan metabolic process	0.00E+00
2	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
3	GO:0043269: regulation of ion transport	0.00E+00
4	GO:0042891: antibiotic transport	0.00E+00
5	GO:1901535: regulation of DNA demethylation	0.00E+00
6	GO:0006105: succinate metabolic process	0.00E+00
7	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
8	GO:0019484: beta-alanine catabolic process	0.00E+00
9	GO:0006480: N-terminal protein amino acid methylation	0.00E+00
10	GO:0071215: cellular response to abscisic acid stimulus	5.68E-05
11	GO:0009450: gamma-aminobutyric acid catabolic process	1.69E-04
12	GO:0009623: response to parasitic fungus	1.69E-04
13	GO:1990641: response to iron ion starvation	1.69E-04
14	GO:1902265: abscisic acid homeostasis	1.69E-04
15	GO:0009865: pollen tube adhesion	1.69E-04
16	GO:0006540: glutamate decarboxylation to succinate	1.69E-04
17	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	3.83E-04
18	GO:0010033: response to organic substance	3.83E-04
19	GO:0002215: defense response to nematode	3.83E-04
20	GO:0009727: detection of ethylene stimulus	3.83E-04
21	GO:1900459: positive regulation of brassinosteroid mediated signaling pathway	3.83E-04
22	GO:0006101: citrate metabolic process	3.83E-04
23	GO:0060919: auxin influx	3.83E-04
24	GO:0010030: positive regulation of seed germination	5.27E-04
25	GO:0000162: tryptophan biosynthetic process	5.87E-04
26	GO:0071398: cellular response to fatty acid	6.25E-04
27	GO:0042256: mature ribosome assembly	6.25E-04
28	GO:0006954: inflammatory response	6.25E-04
29	GO:1902626: assembly of large subunit precursor of preribosome	6.25E-04
30	GO:0046686: response to cadmium ion	6.78E-04
31	GO:0019438: aromatic compound biosynthetic process	8.93E-04
32	GO:0006624: vacuolar protein processing	8.93E-04
33	GO:0006020: inositol metabolic process	8.93E-04
34	GO:0072334: UDP-galactose transmembrane transport	8.93E-04
35	GO:0009399: nitrogen fixation	8.93E-04
36	GO:0009113: purine nucleobase biosynthetic process	8.93E-04
37	GO:0009723: response to ethylene	1.01E-03
38	GO:0009651: response to salt stress	1.17E-03
39	GO:0006542: glutamine biosynthetic process	1.18E-03
40	GO:0009687: abscisic acid metabolic process	1.18E-03
41	GO:0006468: protein phosphorylation	1.18E-03
42	GO:1902584: positive regulation of response to water deprivation	1.18E-03
43	GO:0006536: glutamate metabolic process	1.18E-03
44	GO:0042273: ribosomal large subunit biogenesis	1.18E-03
45	GO:0010600: regulation of auxin biosynthetic process	1.18E-03
46	GO:0000460: maturation of 5.8S rRNA	1.18E-03
47	GO:0044550: secondary metabolite biosynthetic process	1.27E-03
48	GO:0048544: recognition of pollen	1.35E-03
49	GO:0007029: endoplasmic reticulum organization	1.50E-03
50	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	1.50E-03
51	GO:0006090: pyruvate metabolic process	1.50E-03
52	GO:0016070: RNA metabolic process	1.85E-03
53	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.85E-03
54	GO:0000470: maturation of LSU-rRNA	1.85E-03
55	GO:0042732: D-xylose metabolic process	1.85E-03
56	GO:0010315: auxin efflux	1.85E-03
57	GO:0000741: karyogamy	1.85E-03
58	GO:0006014: D-ribose metabolic process	1.85E-03
59	GO:0000054: ribosomal subunit export from nucleus	2.22E-03
60	GO:0010150: leaf senescence	2.60E-03
61	GO:0010044: response to aluminum ion	2.61E-03
62	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.61E-03
63	GO:0080027: response to herbivore	2.61E-03
64	GO:0009395: phospholipid catabolic process	2.61E-03
65	GO:0071669: plant-type cell wall organization or biogenesis	2.61E-03
66	GO:0070370: cellular heat acclimation	2.61E-03
67	GO:0009396: folic acid-containing compound biosynthetic process	2.61E-03
68	GO:0006333: chromatin assembly or disassembly	2.61E-03
69	GO:0009817: defense response to fungus, incompatible interaction	2.89E-03
70	GO:0006102: isocitrate metabolic process	3.02E-03
71	GO:0016559: peroxisome fission	3.02E-03
72	GO:0009061: anaerobic respiration	3.02E-03
73	GO:0009819: drought recovery	3.02E-03
74	GO:0007166: cell surface receptor signaling pathway	3.07E-03
75	GO:0010043: response to zinc ion	3.33E-03
76	GO:0030968: endoplasmic reticulum unfolded protein response	3.46E-03
77	GO:0044030: regulation of DNA methylation	3.46E-03
78	GO:0006099: tricarboxylic acid cycle	3.81E-03
79	GO:0009051: pentose-phosphate shunt, oxidative branch	3.91E-03
80	GO:0006098: pentose-phosphate shunt	3.91E-03
81	GO:0046916: cellular transition metal ion homeostasis	3.91E-03
82	GO:0016573: histone acetylation	4.38E-03
83	GO:0035999: tetrahydrofolate interconversion	4.38E-03
84	GO:0008202: steroid metabolic process	4.38E-03
85	GO:0051707: response to other organism	4.70E-03
86	GO:0006535: cysteine biosynthetic process from serine	4.87E-03
87	GO:0055114: oxidation-reduction process	4.94E-03
88	GO:0030148: sphingolipid biosynthetic process	5.38E-03
89	GO:0006378: mRNA polyadenylation	5.38E-03
90	GO:0006855: drug transmembrane transport	5.47E-03
91	GO:0071365: cellular response to auxin stimulus	5.91E-03
92	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.91E-03
93	GO:0006813: potassium ion transport	6.32E-03
94	GO:0006807: nitrogen compound metabolic process	6.46E-03
95	GO:0006108: malate metabolic process	6.46E-03
96	GO:0010540: basipetal auxin transport	7.02E-03
97	GO:0034605: cellular response to heat	7.02E-03
98	GO:0006541: glutamine metabolic process	7.02E-03
99	GO:0007034: vacuolar transport	7.02E-03
100	GO:0009969: xyloglucan biosynthetic process	7.60E-03
101	GO:0007031: peroxisome organization	7.60E-03
102	GO:0005985: sucrose metabolic process	7.60E-03
103	GO:0071732: cellular response to nitric oxide	7.60E-03
104	GO:0048367: shoot system development	7.72E-03
105	GO:0034976: response to endoplasmic reticulum stress	8.20E-03
106	GO:0019344: cysteine biosynthetic process	8.81E-03
107	GO:0009742: brassinosteroid mediated signaling pathway	9.55E-03
108	GO:0051260: protein homooligomerization	1.01E-02
109	GO:0098542: defense response to other organism	1.01E-02
110	GO:0031408: oxylipin biosynthetic process	1.01E-02
111	GO:0071456: cellular response to hypoxia	1.08E-02
112	GO:0009814: defense response, incompatible interaction	1.08E-02
113	GO:0016226: iron-sulfur cluster assembly	1.08E-02
114	GO:0035428: hexose transmembrane transport	1.08E-02
115	GO:0009693: ethylene biosynthetic process	1.14E-02
116	GO:0071369: cellular response to ethylene stimulus	1.14E-02
117	GO:0042631: cellular response to water deprivation	1.36E-02
118	GO:0000271: polysaccharide biosynthetic process	1.36E-02
119	GO:0010197: polar nucleus fusion	1.43E-02
120	GO:0046323: glucose import	1.43E-02
121	GO:0045489: pectin biosynthetic process	1.43E-02
122	GO:0006885: regulation of pH	1.43E-02
123	GO:0006520: cellular amino acid metabolic process	1.43E-02
124	GO:0010154: fruit development	1.43E-02
125	GO:0009646: response to absence of light	1.51E-02
126	GO:0009851: auxin biosynthetic process	1.58E-02
127	GO:0010183: pollen tube guidance	1.58E-02
128	GO:0019252: starch biosynthetic process	1.58E-02
129	GO:0002229: defense response to oomycetes	1.66E-02
130	GO:0006635: fatty acid beta-oxidation	1.66E-02
131	GO:0009733: response to auxin	1.67E-02
132	GO:0010583: response to cyclopentenone	1.74E-02
133	GO:0016032: viral process	1.74E-02
134	GO:0071281: cellular response to iron ion	1.82E-02
135	GO:0010286: heat acclimation	1.99E-02
136	GO:0071805: potassium ion transmembrane transport	1.99E-02
137	GO:0009611: response to wounding	2.07E-02
138	GO:0051607: defense response to virus	2.07E-02
139	GO:0009615: response to virus	2.16E-02
140	GO:0001666: response to hypoxia	2.16E-02
141	GO:0009816: defense response to bacterium, incompatible interaction	2.24E-02
142	GO:0009627: systemic acquired resistance	2.33E-02
143	GO:0042128: nitrate assimilation	2.33E-02
144	GO:0009826: unidimensional cell growth	2.33E-02
145	GO:0048573: photoperiodism, flowering	2.42E-02
146	GO:0008219: cell death	2.61E-02
147	GO:0030244: cellulose biosynthetic process	2.61E-02
148	GO:0048767: root hair elongation	2.70E-02
149	GO:0010311: lateral root formation	2.70E-02
150	GO:0009832: plant-type cell wall biogenesis	2.70E-02
151	GO:0009407: toxin catabolic process	2.79E-02
152	GO:0007568: aging	2.89E-02
153	GO:0009631: cold acclimation	2.89E-02
154	GO:0030001: metal ion transport	3.38E-02
155	GO:0045454: cell redox homeostasis	3.59E-02
156	GO:0009744: response to sucrose	3.69E-02
157	GO:0009636: response to toxic substance	4.01E-02
158	GO:0016042: lipid catabolic process	4.29E-02
159	GO:0042538: hyperosmotic salinity response	4.34E-02
160	GO:0006812: cation transport	4.34E-02
161	GO:0009751: response to salicylic acid	4.35E-02
162	GO:0006397: mRNA processing	4.60E-02
163	GO:0048364: root development	4.60E-02
164	GO:0051603: proteolysis involved in cellular protein catabolic process	4.68E-02
165	GO:0009753: response to jasmonic acid	4.73E-02
166	GO:0006857: oligopeptide transport	4.79E-02
167	GO:0042742: defense response to bacterium	4.83E-02
168	GO:0006979: response to oxidative stress	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0047634: agmatine N4-coumaroyltransferase activity	0.00E+00
3	GO:0009045: xylose isomerase activity	0.00E+00
4	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
5	GO:0050897: cobalt ion binding	2.64E-05
6	GO:0046870: cadmium ion binding	1.69E-04
7	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.69E-04
8	GO:0003867: 4-aminobutyrate transaminase activity	1.69E-04
9	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.69E-04
10	GO:0071949: FAD binding	1.95E-04
11	GO:0016301: kinase activity	2.68E-04
12	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	3.83E-04
13	GO:0004566: beta-glucuronidase activity	3.83E-04
14	GO:0032791: lead ion binding	3.83E-04
15	GO:0003994: aconitate hydratase activity	3.83E-04
16	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	3.83E-04
17	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	3.83E-04
18	GO:0045140: inositol phosphoceramide synthase activity	3.83E-04
19	GO:0004352: glutamate dehydrogenase (NAD+) activity	3.83E-04
20	GO:0004329: formate-tetrahydrofolate ligase activity	3.83E-04
21	GO:0005507: copper ion binding	4.98E-04
22	GO:0005524: ATP binding	5.53E-04
23	GO:0016595: glutamate binding	6.25E-04
24	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	6.25E-04
25	GO:0004049: anthranilate synthase activity	6.25E-04
26	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	6.25E-04
27	GO:0000339: RNA cap binding	8.93E-04
28	GO:0043023: ribosomal large subunit binding	8.93E-04
29	GO:0048027: mRNA 5'-UTR binding	8.93E-04
30	GO:0004108: citrate (Si)-synthase activity	8.93E-04
31	GO:0030527: structural constituent of chromatin	8.93E-04
32	GO:0016656: monodehydroascorbate reductase (NADH) activity	8.93E-04
33	GO:0004834: tryptophan synthase activity	1.18E-03
34	GO:0004737: pyruvate decarboxylase activity	1.18E-03
35	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.18E-03
36	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.18E-03
37	GO:0010328: auxin influx transmembrane transporter activity	1.18E-03
38	GO:0004470: malic enzyme activity	1.18E-03
39	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.18E-03
40	GO:0004356: glutamate-ammonia ligase activity	1.50E-03
41	GO:0010294: abscisic acid glucosyltransferase activity	1.50E-03
42	GO:0005459: UDP-galactose transmembrane transporter activity	1.50E-03
43	GO:0008948: oxaloacetate decarboxylase activity	1.50E-03
44	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.65E-03
45	GO:0030976: thiamine pyrophosphate binding	1.85E-03
46	GO:0035252: UDP-xylosyltransferase activity	1.85E-03
47	GO:0051020: GTPase binding	2.22E-03
48	GO:0004124: cysteine synthase activity	2.22E-03
49	GO:0051753: mannan synthase activity	2.22E-03
50	GO:0004747: ribokinase activity	2.22E-03
51	GO:0016831: carboxy-lyase activity	2.61E-03
52	GO:0004620: phospholipase activity	2.61E-03
53	GO:0008865: fructokinase activity	3.02E-03
54	GO:0043022: ribosome binding	3.02E-03
55	GO:0004525: ribonuclease III activity	3.02E-03
56	GO:0015238: drug transmembrane transporter activity	3.03E-03
57	GO:0008142: oxysterol binding	3.46E-03
58	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.51E-03
59	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.91E-03
60	GO:0051539: 4 iron, 4 sulfur cluster binding	4.15E-03
61	GO:0008171: O-methyltransferase activity	4.87E-03
62	GO:0004713: protein tyrosine kinase activity	4.87E-03
63	GO:0047372: acylglycerol lipase activity	5.38E-03
64	GO:0004521: endoribonuclease activity	5.91E-03
65	GO:0004497: monooxygenase activity	5.93E-03
66	GO:0010329: auxin efflux transmembrane transporter activity	6.46E-03
67	GO:0004022: alcohol dehydrogenase (NAD) activity	6.46E-03
68	GO:0004175: endopeptidase activity	7.02E-03
69	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.02E-03
70	GO:0008061: chitin binding	7.60E-03
71	GO:0019825: oxygen binding	8.24E-03
72	GO:0004674: protein serine/threonine kinase activity	8.27E-03
73	GO:0051536: iron-sulfur cluster binding	8.81E-03
74	GO:0031418: L-ascorbic acid binding	8.81E-03
75	GO:0043424: protein histidine kinase binding	9.44E-03
76	GO:0015079: potassium ion transmembrane transporter activity	9.44E-03
77	GO:0004540: ribonuclease activity	1.01E-02
78	GO:0016760: cellulose synthase (UDP-forming) activity	1.14E-02
79	GO:0003756: protein disulfide isomerase activity	1.21E-02
80	GO:0030170: pyridoxal phosphate binding	1.25E-02
81	GO:0005451: monovalent cation:proton antiporter activity	1.36E-02
82	GO:0005506: iron ion binding	1.37E-02
83	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.45E-02
84	GO:0015297: antiporter activity	1.49E-02
85	GO:0015299: solute:proton antiporter activity	1.51E-02
86	GO:0005355: glucose transmembrane transporter activity	1.51E-02
87	GO:0010181: FMN binding	1.51E-02
88	GO:0004197: cysteine-type endopeptidase activity	1.74E-02
89	GO:0015385: sodium:proton antiporter activity	1.82E-02
90	GO:0016759: cellulose synthase activity	1.90E-02
91	GO:0042802: identical protein binding	1.99E-02
92	GO:0004806: triglyceride lipase activity	2.42E-02
93	GO:0030247: polysaccharide binding	2.42E-02
94	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.51E-02
95	GO:0016740: transferase activity	2.59E-02
96	GO:0020037: heme binding	2.77E-02
97	GO:0030246: carbohydrate binding	2.92E-02
98	GO:0003993: acid phosphatase activity	3.18E-02
99	GO:0008422: beta-glucosidase activity	3.28E-02
100	GO:0004364: glutathione transferase activity	3.59E-02
101	GO:0051287: NAD binding	4.23E-02
102	GO:0016298: lipase activity	4.68E-02
103	GO:0031625: ubiquitin protein ligase binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.60E-07
2	GO:0016021: integral component of membrane	3.02E-05
3	GO:0030173: integral component of Golgi membrane	7.42E-05
4	GO:0030687: preribosome, large subunit precursor	9.92E-05
5	GO:0009506: plasmodesma	3.09E-04
6	GO:0005950: anthranilate synthase complex	3.83E-04
7	GO:0005774: vacuolar membrane	3.98E-04
8	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.25E-04
9	GO:0005849: mRNA cleavage factor complex	8.93E-04
10	GO:0005775: vacuolar lumen	8.93E-04
11	GO:0000323: lytic vacuole	8.93E-04
12	GO:0005829: cytosol	2.37E-03
13	GO:0005779: integral component of peroxisomal membrane	3.46E-03
14	GO:0016604: nuclear body	4.38E-03
15	GO:0005765: lysosomal membrane	5.38E-03
16	GO:0016020: membrane	6.97E-03
17	GO:0030176: integral component of endoplasmic reticulum membrane	7.60E-03
18	GO:0005618: cell wall	1.49E-02
19	GO:0031965: nuclear membrane	1.58E-02
20	GO:0000785: chromatin	1.74E-02
21	GO:0005615: extracellular space	1.75E-02
22	GO:0005778: peroxisomal membrane	1.99E-02
23	GO:0000932: P-body	2.16E-02
24	GO:0005777: peroxisome	2.40E-02
25	GO:0005794: Golgi apparatus	2.57E-02
26	GO:0005773: vacuole	2.58E-02
27	GO:0000325: plant-type vacuole	2.89E-02
28	GO:0048046: apoplast	3.50E-02
29	GO:0005802: trans-Golgi network	3.63E-02
30	GO:0005783: endoplasmic reticulum	4.27E-02