Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G49940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080127: fruit septum development0.00E+00
2GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
3GO:0000271: polysaccharide biosynthetic process1.79E-04
4GO:0001678: cellular glucose homeostasis2.55E-04
5GO:1902476: chloride transmembrane transport2.55E-04
6GO:0010411: xyloglucan metabolic process4.15E-04
7GO:2000762: regulation of phenylpropanoid metabolic process4.37E-04
8GO:1900425: negative regulation of defense response to bacterium5.37E-04
9GO:0003006: developmental process involved in reproduction5.37E-04
10GO:0046835: carbohydrate phosphorylation6.40E-04
11GO:0006821: chloride transport7.49E-04
12GO:0051510: regulation of unidimensional cell growth7.49E-04
13GO:0071555: cell wall organization7.59E-04
14GO:0051865: protein autoubiquitination1.10E-03
15GO:0000902: cell morphogenesis1.10E-03
16GO:0048507: meristem development1.10E-03
17GO:0009638: phototropism1.22E-03
18GO:0009742: brassinosteroid mediated signaling pathway1.44E-03
19GO:0015706: nitrate transport1.63E-03
20GO:0010582: floral meristem determinacy1.63E-03
21GO:0048467: gynoecium development1.92E-03
22GO:0009969: xyloglucan biosynthetic process2.07E-03
23GO:0010167: response to nitrate2.07E-03
24GO:0080147: root hair cell development2.39E-03
25GO:0016998: cell wall macromolecule catabolic process2.72E-03
26GO:0010017: red or far-red light signaling pathway2.89E-03
27GO:0010087: phloem or xylem histogenesis3.61E-03
28GO:0000226: microtubule cytoskeleton organization3.61E-03
29GO:0009958: positive gravitropism3.80E-03
30GO:0009741: response to brassinosteroid3.80E-03
31GO:0045489: pectin biosynthetic process3.80E-03
32GO:0010305: leaf vascular tissue pattern formation3.80E-03
33GO:0006970: response to osmotic stress3.84E-03
34GO:0009791: post-embryonic development4.19E-03
35GO:0080167: response to karrikin4.42E-03
36GO:0010200: response to chitin4.57E-03
37GO:0007264: small GTPase mediated signal transduction4.58E-03
38GO:0046777: protein autophosphorylation4.72E-03
39GO:0019760: glucosinolate metabolic process5.00E-03
40GO:0016126: sterol biosynthetic process5.64E-03
41GO:0048767: root hair elongation7.01E-03
42GO:0010218: response to far red light7.25E-03
43GO:0010119: regulation of stomatal movement7.49E-03
44GO:0007568: aging7.49E-03
45GO:0016051: carbohydrate biosynthetic process7.99E-03
46GO:0010114: response to red light9.53E-03
47GO:0009744: response to sucrose9.53E-03
48GO:0042546: cell wall biogenesis9.80E-03
49GO:0009738: abscisic acid-activated signaling pathway1.12E-02
50GO:0009416: response to light stimulus1.16E-02
51GO:0006486: protein glycosylation1.18E-02
52GO:0009585: red, far-red light phototransduction1.18E-02
53GO:0051603: proteolysis involved in cellular protein catabolic process1.20E-02
54GO:0006096: glycolytic process1.32E-02
55GO:0016567: protein ubiquitination1.77E-02
56GO:0009845: seed germination1.87E-02
57GO:0040008: regulation of growth2.15E-02
58GO:0009826: unidimensional cell growth2.95E-02
59GO:0009409: response to cold3.18E-02
60GO:0009860: pollen tube growth3.20E-02
61GO:0007049: cell cycle3.28E-02
62GO:0009723: response to ethylene3.37E-02
63GO:0006810: transport3.45E-02
64GO:0045454: cell redox homeostasis4.02E-02
65GO:0032259: methylation4.53E-02
66GO:0009751: response to salicylic acid4.62E-02
67GO:0006629: lipid metabolic process4.67E-02
68GO:0009753: response to jasmonic acid4.90E-02
69GO:0009737: response to abscisic acid4.97E-02
RankGO TermAdjusted P value
1GO:0003838: sterol 24-C-methyltransferase activity4.04E-05
2GO:0009671: nitrate:proton symporter activity4.04E-05
3GO:0047274: galactinol-sucrose galactosyltransferase activity1.73E-04
4GO:0033843: xyloglucan 6-xylosyltransferase activity2.55E-04
5GO:0016759: cellulose synthase activity2.95E-04
6GO:0005253: anion channel activity3.43E-04
7GO:0004396: hexokinase activity3.43E-04
8GO:0019158: mannokinase activity3.43E-04
9GO:0005536: glucose binding3.43E-04
10GO:0002020: protease binding4.37E-04
11GO:0035252: UDP-xylosyltransferase activity5.37E-04
12GO:0010427: abscisic acid binding5.37E-04
13GO:0005247: voltage-gated chloride channel activity5.37E-04
14GO:0016757: transferase activity, transferring glycosyl groups1.08E-03
15GO:0015112: nitrate transmembrane transporter activity1.22E-03
16GO:0004864: protein phosphatase inhibitor activity1.35E-03
17GO:0016758: transferase activity, transferring hexosyl groups1.65E-03
18GO:0008134: transcription factor binding2.39E-03
19GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.89E-03
20GO:0004872: receptor activity4.19E-03
21GO:0016762: xyloglucan:xyloglucosyl transferase activity4.38E-03
22GO:0016798: hydrolase activity, acting on glycosyl bonds6.31E-03
23GO:0004842: ubiquitin-protein transferase activity6.48E-03
24GO:0005515: protein binding7.23E-03
25GO:0004185: serine-type carboxypeptidase activity9.53E-03
26GO:0043621: protein self-association1.01E-02
27GO:0016298: lipase activity1.20E-02
28GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.53E-02
29GO:0004674: protein serine/threonine kinase activity3.23E-02
30GO:0004672: protein kinase activity3.45E-02
31GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.02E-02
32GO:0042803: protein homodimerization activity4.16E-02
33GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.34E-02
34GO:0003924: GTPase activity4.67E-02
RankGO TermAdjusted P value
1GO:0034707: chloride channel complex5.37E-04
2GO:0000139: Golgi membrane1.19E-03
3GO:0031307: integral component of mitochondrial outer membrane1.63E-03
4GO:0005773: vacuole9.42E-03
5GO:0005886: plasma membrane1.84E-02
6GO:0005802: trans-Golgi network1.86E-02
7GO:0005794: Golgi apparatus1.95E-02
8GO:0005768: endosome2.11E-02
9GO:0009705: plant-type vacuole membrane2.22E-02
10GO:0005615: extracellular space2.41E-02
11GO:0046658: anchored component of plasma membrane2.72E-02
12GO:0009536: plastid2.88E-02
13GO:0009505: plant-type cell wall2.94E-02
14GO:0009506: plasmodesma3.67E-02
Gene type



Gene DE type