Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G49580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034484: raffinose catabolic process0.00E+00
2GO:0006792: regulation of sulfur utilization0.00E+00
3GO:0010200: response to chitin3.76E-10
4GO:0009751: response to salicylic acid1.81E-06
5GO:0010439: regulation of glucosinolate biosynthetic process7.91E-06
6GO:0050691: regulation of defense response to virus by host2.88E-05
7GO:0080164: regulation of nitric oxide metabolic process2.88E-05
8GO:0055063: sulfate ion homeostasis2.88E-05
9GO:0046500: S-adenosylmethionine metabolic process2.88E-05
10GO:0071497: cellular response to freezing7.28E-05
11GO:0051592: response to calcium ion7.28E-05
12GO:2000022: regulation of jasmonic acid mediated signaling pathway7.80E-05
13GO:0009741: response to brassinosteroid1.23E-04
14GO:0080168: abscisic acid transport1.27E-04
15GO:0046345: abscisic acid catabolic process2.57E-04
16GO:0010411: xyloglucan metabolic process2.70E-04
17GO:0006355: regulation of transcription, DNA-templated3.00E-04
18GO:0010438: cellular response to sulfur starvation3.30E-04
19GO:0006544: glycine metabolic process3.30E-04
20GO:0006563: L-serine metabolic process4.06E-04
21GO:0030154: cell differentiation4.44E-04
22GO:0042542: response to hydrogen peroxide4.68E-04
23GO:0009612: response to mechanical stimulus4.86E-04
24GO:0042546: cell wall biogenesis5.06E-04
25GO:0009753: response to jasmonic acid5.53E-04
26GO:0010038: response to metal ion5.68E-04
27GO:0031347: regulation of defense response5.86E-04
28GO:2000070: regulation of response to water deprivation6.55E-04
29GO:0035265: organ growth6.55E-04
30GO:0030162: regulation of proteolysis6.55E-04
31GO:0009873: ethylene-activated signaling pathway6.98E-04
32GO:0006357: regulation of transcription from RNA polymerase II promoter7.20E-04
33GO:0044030: regulation of DNA methylation7.44E-04
34GO:2000031: regulation of salicylic acid mediated signaling pathway7.44E-04
35GO:0048574: long-day photoperiodism, flowering7.44E-04
36GO:0035999: tetrahydrofolate interconversion9.29E-04
37GO:1903507: negative regulation of nucleic acid-templated transcription1.13E-03
38GO:0010015: root morphogenesis1.13E-03
39GO:0034605: cellular response to heat1.45E-03
40GO:0002237: response to molecule of bacterial origin1.45E-03
41GO:0040007: growth2.30E-03
42GO:0009658: chloroplast organization2.34E-03
43GO:0009414: response to water deprivation2.41E-03
44GO:0009723: response to ethylene2.70E-03
45GO:0010268: brassinosteroid homeostasis2.84E-03
46GO:0006351: transcription, DNA-templated2.87E-03
47GO:0009733: response to auxin2.88E-03
48GO:0009646: response to absence of light2.99E-03
49GO:0016132: brassinosteroid biosynthetic process3.28E-03
50GO:0009409: response to cold3.65E-03
51GO:0009639: response to red or far red light3.73E-03
52GO:0009828: plant-type cell wall loosening3.73E-03
53GO:0016125: sterol metabolic process3.73E-03
54GO:0001666: response to hypoxia4.21E-03
55GO:0048573: photoperiodism, flowering4.71E-03
56GO:0016049: cell growth4.88E-03
57GO:0048527: lateral root development5.58E-03
58GO:0045087: innate immune response5.94E-03
59GO:0009737: response to abscisic acid6.47E-03
60GO:0009611: response to wounding7.67E-03
61GO:0006855: drug transmembrane transport7.88E-03
62GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process8.09E-03
63GO:0045893: positive regulation of transcription, DNA-templated8.62E-03
64GO:0009909: regulation of flower development9.36E-03
65GO:0009742: brassinosteroid mediated signaling pathway1.16E-02
66GO:0009845: seed germination1.38E-02
67GO:0071555: cell wall organization1.53E-02
68GO:0042742: defense response to bacterium1.53E-02
69GO:0007623: circadian rhythm1.64E-02
70GO:0009739: response to gibberellin1.78E-02
71GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.78E-02
72GO:0009826: unidimensional cell growth2.18E-02
73GO:0006970: response to osmotic stress2.36E-02
74GO:0046686: response to cadmium ion2.38E-02
75GO:0080167: response to karrikin2.61E-02
76GO:0046777: protein autophosphorylation2.74E-02
77GO:0045454: cell redox homeostasis2.97E-02
78GO:0007275: multicellular organism development3.01E-02
79GO:0009408: response to heat3.45E-02
80GO:0050832: defense response to fungus4.52E-02
RankGO TermAdjusted P value
1GO:0090440: abscisic acid transporter activity2.88E-05
2GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.27E-04
3GO:0052692: raffinose alpha-galactosidase activity1.27E-04
4GO:0016762: xyloglucan:xyloglucosyl transferase activity1.54E-04
5GO:0043565: sequence-specific DNA binding2.05E-04
6GO:0003700: transcription factor activity, sequence-specific DNA binding2.63E-04
7GO:0016798: hydrolase activity, acting on glycosyl bonds2.70E-04
8GO:0004372: glycine hydroxymethyltransferase activity3.30E-04
9GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.89E-04
10GO:0044212: transcription regulatory region DNA binding3.89E-04
11GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.46E-04
12GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.45E-03
13GO:0003712: transcription cofactor activity1.56E-03
14GO:0003714: transcription corepressor activity1.79E-03
15GO:0004402: histone acetyltransferase activity2.70E-03
16GO:0001085: RNA polymerase II transcription factor binding2.84E-03
17GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.89E-03
18GO:0015238: drug transmembrane transporter activity5.22E-03
19GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding5.58E-03
20GO:0031625: ubiquitin protein ligase binding9.36E-03
21GO:0003677: DNA binding1.12E-02
22GO:0030170: pyridoxal phosphate binding1.41E-02
23GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.43E-02
24GO:0015297: antiporter activity1.59E-02
25GO:0042802: identical protein binding1.95E-02
26GO:0003682: chromatin binding2.33E-02
27GO:0043531: ADP binding2.39E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0005615: extracellular space1.70E-03
3GO:0015629: actin cytoskeleton2.30E-03
4GO:0005794: Golgi apparatus2.59E-03
5GO:0048046: apoplast2.73E-03
6GO:0005770: late endosome2.84E-03
7GO:0005618: cell wall3.11E-03
8GO:0009505: plant-type cell wall3.31E-03
9GO:0005667: transcription factor complex4.54E-03
10GO:0019005: SCF ubiquitin ligase complex5.05E-03
11GO:0031902: late endosome membrane6.69E-03
Gene type



Gene DE type