co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G49370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
2	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0071456: cellular response to hypoxia	3.07E-05
5	GO:0060627: regulation of vesicle-mediated transport	1.35E-04
6	GO:0015760: glucose-6-phosphate transport	1.35E-04
7	GO:1990641: response to iron ion starvation	1.35E-04
8	GO:0080173: male-female gamete recognition during double fertilization	1.35E-04
9	GO:0010230: alternative respiration	1.35E-04
10	GO:0043609: regulation of carbon utilization	1.35E-04
11	GO:0010112: regulation of systemic acquired resistance	1.40E-04
12	GO:0006468: protein phosphorylation	1.48E-04
13	GO:0006032: chitin catabolic process	2.00E-04
14	GO:0000272: polysaccharide catabolic process	2.34E-04
15	GO:0010150: leaf senescence	2.55E-04
16	GO:0019521: D-gluconate metabolic process	3.11E-04
17	GO:0009915: phloem sucrose loading	3.11E-04
18	GO:0044419: interspecies interaction between organisms	3.11E-04
19	GO:0031349: positive regulation of defense response	3.11E-04
20	GO:0015712: hexose phosphate transport	3.11E-04
21	GO:0060919: auxin influx	3.11E-04
22	GO:0006101: citrate metabolic process	3.11E-04
23	GO:0097054: L-glutamate biosynthetic process	3.11E-04
24	GO:0031648: protein destabilization	3.11E-04
25	GO:0031538: negative regulation of anthocyanin metabolic process	3.11E-04
26	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.11E-04
27	GO:0015824: proline transport	3.11E-04
28	GO:0051262: protein tetramerization	3.11E-04
29	GO:0009617: response to bacterium	3.39E-04
30	GO:0002237: response to molecule of bacterial origin	3.49E-04
31	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	5.13E-04
32	GO:0015714: phosphoenolpyruvate transport	5.13E-04
33	GO:1900140: regulation of seedling development	5.13E-04
34	GO:0010359: regulation of anion channel activity	5.13E-04
35	GO:0080055: low-affinity nitrate transport	5.13E-04
36	GO:0035436: triose phosphate transmembrane transport	5.13E-04
37	GO:0010272: response to silver ion	5.13E-04
38	GO:0016998: cell wall macromolecule catabolic process	5.84E-04
39	GO:0071329: cellular response to sucrose stimulus	7.34E-04
40	GO:0006537: glutamate biosynthetic process	7.34E-04
41	GO:0043967: histone H4 acetylation	7.34E-04
42	GO:0048194: Golgi vesicle budding	7.34E-04
43	GO:0015713: phosphoglycerate transport	9.73E-04
44	GO:0080142: regulation of salicylic acid biosynthetic process	9.73E-04
45	GO:0010109: regulation of photosynthesis	9.73E-04
46	GO:0019676: ammonia assimilation cycle	9.73E-04
47	GO:0060548: negative regulation of cell death	9.73E-04
48	GO:0048544: recognition of pollen	1.01E-03
49	GO:0009749: response to glucose	1.08E-03
50	GO:0034052: positive regulation of plant-type hypersensitive response	1.23E-03
51	GO:0009697: salicylic acid biosynthetic process	1.23E-03
52	GO:0030041: actin filament polymerization	1.23E-03
53	GO:0006097: glyoxylate cycle	1.23E-03
54	GO:0010315: auxin efflux	1.51E-03
55	GO:1902456: regulation of stomatal opening	1.51E-03
56	GO:0009643: photosynthetic acclimation	1.51E-03
57	GO:0006561: proline biosynthetic process	1.51E-03
58	GO:0016036: cellular response to phosphate starvation	1.61E-03
59	GO:0043966: histone H3 acetylation	1.81E-03
60	GO:0010189: vitamin E biosynthetic process	1.81E-03
61	GO:0010555: response to mannitol	1.81E-03
62	GO:2000067: regulation of root morphogenesis	1.81E-03
63	GO:0015977: carbon fixation	1.81E-03
64	GO:0009627: systemic acquired resistance	1.83E-03
65	GO:0043090: amino acid import	2.12E-03
66	GO:1900056: negative regulation of leaf senescence	2.12E-03
67	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.12E-03
68	GO:0006368: transcription elongation from RNA polymerase II promoter	2.12E-03
69	GO:0009395: phospholipid catabolic process	2.12E-03
70	GO:0008219: cell death	2.14E-03
71	GO:0042742: defense response to bacterium	2.22E-03
72	GO:0009407: toxin catabolic process	2.35E-03
73	GO:0009737: response to abscisic acid	2.41E-03
74	GO:0010928: regulation of auxin mediated signaling pathway	2.46E-03
75	GO:0035265: organ growth	2.46E-03
76	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.46E-03
77	GO:0019375: galactolipid biosynthetic process	2.46E-03
78	GO:0006102: isocitrate metabolic process	2.46E-03
79	GO:0006865: amino acid transport	2.58E-03
80	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	2.81E-03
81	GO:0007186: G-protein coupled receptor signaling pathway	2.81E-03
82	GO:0010262: somatic embryogenesis	2.81E-03
83	GO:0010120: camalexin biosynthetic process	2.81E-03
84	GO:0006099: tricarboxylic acid cycle	2.82E-03
85	GO:0006098: pentose-phosphate shunt	3.17E-03
86	GO:2000024: regulation of leaf development	3.17E-03
87	GO:0006631: fatty acid metabolic process	3.20E-03
88	GO:0009744: response to sucrose	3.47E-03
89	GO:0010205: photoinhibition	3.55E-03
90	GO:0009636: response to toxic substance	3.89E-03
91	GO:0006995: cellular response to nitrogen starvation	3.95E-03
92	GO:0031347: regulation of defense response	4.19E-03
93	GO:0009750: response to fructose	4.36E-03
94	GO:0006790: sulfur compound metabolic process	4.79E-03
95	GO:0002213: defense response to insect	4.79E-03
96	GO:0015706: nitrate transport	4.79E-03
97	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.79E-03
98	GO:0009718: anthocyanin-containing compound biosynthetic process	5.22E-03
99	GO:0006952: defense response	5.46E-03
100	GO:0010143: cutin biosynthetic process	5.68E-03
101	GO:0010540: basipetal auxin transport	5.68E-03
102	GO:0009266: response to temperature stimulus	5.68E-03
103	GO:0009626: plant-type hypersensitive response	5.86E-03
104	GO:0070588: calcium ion transmembrane transport	6.14E-03
105	GO:0046854: phosphatidylinositol phosphorylation	6.14E-03
106	GO:0034976: response to endoplasmic reticulum stress	6.62E-03
107	GO:0010025: wax biosynthetic process	6.62E-03
108	GO:0006636: unsaturated fatty acid biosynthetic process	6.62E-03
109	GO:0005992: trehalose biosynthetic process	7.11E-03
110	GO:0006874: cellular calcium ion homeostasis	7.62E-03
111	GO:0031348: negative regulation of defense response	8.67E-03
112	GO:0006979: response to oxidative stress	8.91E-03
113	GO:0010227: floral organ abscission	9.21E-03
114	GO:0006817: phosphate ion transport	9.77E-03
115	GO:0008284: positive regulation of cell proliferation	1.03E-02
116	GO:0006633: fatty acid biosynthetic process	1.04E-02
117	GO:0008360: regulation of cell shape	1.15E-02
118	GO:0007166: cell surface receptor signaling pathway	1.31E-02
119	GO:0071554: cell wall organization or biogenesis	1.34E-02
120	GO:0010193: response to ozone	1.34E-02
121	GO:0000302: response to reactive oxygen species	1.34E-02
122	GO:0009630: gravitropism	1.40E-02
123	GO:0046686: response to cadmium ion	1.72E-02
124	GO:0009615: response to virus	1.73E-02
125	GO:0009816: defense response to bacterium, incompatible interaction	1.80E-02
126	GO:0009607: response to biotic stimulus	1.80E-02
127	GO:0055085: transmembrane transport	1.85E-02
128	GO:0042128: nitrate assimilation	1.88E-02
129	GO:0016311: dephosphorylation	2.02E-02
130	GO:0048366: leaf development	2.09E-02
131	GO:0048767: root hair elongation	2.17E-02
132	GO:0080167: response to karrikin	2.21E-02
133	GO:0010200: response to chitin	2.28E-02
134	GO:0010119: regulation of stomatal movement	2.32E-02
135	GO:0007568: aging	2.32E-02
136	GO:0015979: photosynthesis	2.52E-02
137	GO:0007165: signal transduction	2.64E-02
138	GO:0006839: mitochondrial transport	2.72E-02
139	GO:0042542: response to hydrogen peroxide	2.88E-02
140	GO:0008283: cell proliferation	2.97E-02
141	GO:0009926: auxin polar transport	2.97E-02
142	GO:0051707: response to other organism	2.97E-02
143	GO:0009644: response to high light intensity	3.14E-02
144	GO:0009751: response to salicylic acid	3.21E-02
145	GO:0006855: drug transmembrane transport	3.31E-02
146	GO:0048364: root development	3.40E-02
147	GO:0042538: hyperosmotic salinity response	3.49E-02
148	GO:0009846: pollen germination	3.49E-02
149	GO:0006857: oligopeptide transport	3.85E-02
150	GO:0006096: glycolytic process	4.13E-02
151	GO:0009734: auxin-activated signaling pathway	4.57E-02
152	GO:0006508: proteolysis	4.64E-02
153	GO:0009624: response to nematode	4.71E-02
154	GO:0018105: peptidyl-serine phosphorylation	4.81E-02
155	GO:0009742: brassinosteroid mediated signaling pathway	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0070577: lysine-acetylated histone binding	0.00E+00
2	GO:0015930: glutamate synthase activity	0.00E+00
3	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
4	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
5	GO:0016504: peptidase activator activity	0.00E+00
6	GO:0004674: protein serine/threonine kinase activity	4.61E-06
7	GO:0102391: decanoate--CoA ligase activity	5.23E-05
8	GO:0004467: long-chain fatty acid-CoA ligase activity	7.02E-05
9	GO:0004714: transmembrane receptor protein tyrosine kinase activity	9.09E-05
10	GO:0005524: ATP binding	1.01E-04
11	GO:0031957: very long-chain fatty acid-CoA ligase activity	1.35E-04
12	GO:0016041: glutamate synthase (ferredoxin) activity	1.35E-04
13	GO:0004568: chitinase activity	2.00E-04
14	GO:0005315: inorganic phosphate transmembrane transporter activity	3.08E-04
15	GO:0015152: glucose-6-phosphate transmembrane transporter activity	3.11E-04
16	GO:0038199: ethylene receptor activity	3.11E-04
17	GO:0003994: aconitate hydratase activity	3.11E-04
18	GO:0008061: chitin binding	3.91E-04
19	GO:0015293: symporter activity	4.56E-04
20	GO:0031683: G-protein beta/gamma-subunit complex binding	5.13E-04
21	GO:0008964: phosphoenolpyruvate carboxylase activity	5.13E-04
22	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	5.13E-04
23	GO:0015193: L-proline transmembrane transporter activity	5.13E-04
24	GO:0071917: triose-phosphate transmembrane transporter activity	5.13E-04
25	GO:0001664: G-protein coupled receptor binding	5.13E-04
26	GO:0080054: low-affinity nitrate transmembrane transporter activity	5.13E-04
27	GO:0035529: NADH pyrophosphatase activity	7.34E-04
28	GO:0051740: ethylene binding	7.34E-04
29	GO:0010328: auxin influx transmembrane transporter activity	9.73E-04
30	GO:0000993: RNA polymerase II core binding	9.73E-04
31	GO:0070628: proteasome binding	9.73E-04
32	GO:0015120: phosphoglycerate transmembrane transporter activity	9.73E-04
33	GO:0004659: prenyltransferase activity	9.73E-04
34	GO:0005496: steroid binding	1.23E-03
35	GO:0047631: ADP-ribose diphosphatase activity	1.23E-03
36	GO:0051538: 3 iron, 4 sulfur cluster binding	1.23E-03
37	GO:0000210: NAD+ diphosphatase activity	1.51E-03
38	GO:0016301: kinase activity	1.65E-03
39	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.81E-03
40	GO:0004012: phospholipid-translocating ATPase activity	1.81E-03
41	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.81E-03
42	GO:0004143: diacylglycerol kinase activity	2.12E-03
43	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.81E-03
44	GO:0003843: 1,3-beta-D-glucan synthase activity	2.81E-03
45	GO:0004630: phospholipase D activity	2.81E-03
46	GO:0004364: glutathione transferase activity	3.33E-03
47	GO:0004743: pyruvate kinase activity	3.55E-03
48	GO:0030955: potassium ion binding	3.55E-03
49	GO:0004673: protein histidine kinase activity	3.95E-03
50	GO:0004672: protein kinase activity	4.35E-03
51	GO:0008559: xenobiotic-transporting ATPase activity	4.36E-03
52	GO:0015171: amino acid transmembrane transporter activity	5.15E-03
53	GO:0015114: phosphate ion transmembrane transporter activity	5.22E-03
54	GO:0005388: calcium-transporting ATPase activity	5.22E-03
55	GO:0010329: auxin efflux transmembrane transporter activity	5.22E-03
56	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.22E-03
57	GO:0004022: alcohol dehydrogenase (NAD) activity	5.22E-03
58	GO:0000155: phosphorelay sensor kinase activity	5.22E-03
59	GO:0005262: calcium channel activity	5.22E-03
60	GO:0005516: calmodulin binding	5.61E-03
61	GO:0005217: intracellular ligand-gated ion channel activity	6.14E-03
62	GO:0004970: ionotropic glutamate receptor activity	6.14E-03
63	GO:0004190: aspartic-type endopeptidase activity	6.14E-03
64	GO:0003954: NADH dehydrogenase activity	7.11E-03
65	GO:0005509: calcium ion binding	7.79E-03
66	GO:0033612: receptor serine/threonine kinase binding	8.14E-03
67	GO:0022891: substrate-specific transmembrane transporter activity	9.21E-03
68	GO:0003756: protein disulfide isomerase activity	9.77E-03
69	GO:0005215: transporter activity	1.03E-02
70	GO:0004402: histone acetyltransferase activity	1.09E-02
71	GO:0015297: antiporter activity	1.09E-02
72	GO:0030276: clathrin binding	1.15E-02
73	GO:0004872: receptor activity	1.27E-02
74	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.46E-02
75	GO:0016413: O-acetyltransferase activity	1.66E-02
76	GO:0051213: dioxygenase activity	1.73E-02
77	GO:0000287: magnesium ion binding	1.74E-02
78	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.88E-02
79	GO:0030247: polysaccharide binding	1.95E-02
80	GO:0004683: calmodulin-dependent protein kinase activity	1.95E-02
81	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.02E-02
82	GO:0015238: drug transmembrane transporter activity	2.17E-02
83	GO:0030145: manganese ion binding	2.32E-02
84	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.48E-02
85	GO:0003993: acid phosphatase activity	2.56E-02
86	GO:0051539: 4 iron, 4 sulfur cluster binding	2.72E-02
87	GO:0035091: phosphatidylinositol binding	3.14E-02
88	GO:0046872: metal ion binding	3.19E-02
89	GO:0051287: NAD binding	3.40E-02
90	GO:0043565: sequence-specific DNA binding	3.68E-02
91	GO:0008234: cysteine-type peptidase activity	3.95E-02
92	GO:0045735: nutrient reservoir activity	4.13E-02
93	GO:0003779: actin binding	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005886: plasma membrane	5.81E-09
3	GO:0005911: cell-cell junction	1.35E-04
4	GO:0008023: transcription elongation factor complex	1.35E-04
5	GO:0031304: intrinsic component of mitochondrial inner membrane	3.11E-04
6	GO:0033588: Elongator holoenzyme complex	7.34E-04
7	GO:0016021: integral component of membrane	1.18E-03
8	GO:0000123: histone acetyltransferase complex	2.12E-03
9	GO:0048046: apoplast	2.18E-03
10	GO:0030131: clathrin adaptor complex	2.46E-03
11	GO:0000148: 1,3-beta-D-glucan synthase complex	2.81E-03
12	GO:0005829: cytosol	3.20E-03
13	GO:0030665: clathrin-coated vesicle membrane	3.55E-03
14	GO:0005839: proteasome core complex	8.14E-03
15	GO:0009504: cell plate	1.27E-02
16	GO:0005788: endoplasmic reticulum lumen	1.80E-02
17	GO:0031969: chloroplast membrane	2.21E-02
18	GO:0000325: plant-type vacuole	2.32E-02
19	GO:0031225: anchored component of membrane	2.39E-02
20	GO:0005783: endoplasmic reticulum	2.41E-02
21	GO:0005618: cell wall	2.41E-02
22	GO:0005819: spindle	2.64E-02
23	GO:0031966: mitochondrial membrane	3.49E-02
24	GO:0005635: nuclear envelope	3.85E-02
25	GO:0005834: heterotrimeric G-protein complex	4.32E-02
26	GO:0005887: integral component of plasma membrane	4.41E-02
27	GO:0009706: chloroplast inner membrane	4.71E-02