GO Enrichment Analysis of Co-expressed Genes with
AT3G49100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080009: mRNA methylation | 1.18E-05 |
| 2 | GO:0031204: posttranslational protein targeting to membrane, translocation | 1.18E-05 |
| 3 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 3.41E-05 |
| 4 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 4.83E-05 |
| 5 | GO:0000956: nuclear-transcribed mRNA catabolic process | 4.83E-05 |
| 6 | GO:0045116: protein neddylation | 6.40E-05 |
| 7 | GO:0033962: cytoplasmic mRNA processing body assembly | 9.94E-05 |
| 8 | GO:0000338: protein deneddylation | 1.19E-04 |
| 9 | GO:0006491: N-glycan processing | 1.39E-04 |
| 10 | GO:0007389: pattern specification process | 1.60E-04 |
| 11 | GO:0048829: root cap development | 2.29E-04 |
| 12 | GO:0061077: chaperone-mediated protein folding | 4.63E-04 |
| 13 | GO:0007131: reciprocal meiotic recombination | 4.91E-04 |
| 14 | GO:0008033: tRNA processing | 6.08E-04 |
| 15 | GO:0000413: protein peptidyl-prolyl isomerization | 6.08E-04 |
| 16 | GO:0009734: auxin-activated signaling pathway | 6.23E-04 |
| 17 | GO:0010252: auxin homeostasis | 8.27E-04 |
| 18 | GO:0016126: sterol biosynthetic process | 9.24E-04 |
| 19 | GO:0006457: protein folding | 9.91E-04 |
| 20 | GO:0009640: photomorphogenesis | 1.51E-03 |
| 21 | GO:0009965: leaf morphogenesis | 1.63E-03 |
| 22 | GO:0006486: protein glycosylation | 1.83E-03 |
| 23 | GO:0009585: red, far-red light phototransduction | 1.83E-03 |
| 24 | GO:0006396: RNA processing | 2.37E-03 |
| 25 | GO:0000398: mRNA splicing, via spliceosome | 2.56E-03 |
| 26 | GO:0016192: vesicle-mediated transport | 5.42E-03 |
| 27 | GO:0006886: intracellular protein transport | 6.06E-03 |
| 28 | GO:0006281: DNA repair | 6.85E-03 |
| 29 | GO:0048364: root development | 7.06E-03 |
| 30 | GO:0009735: response to cytokinin | 9.61E-03 |
| 31 | GO:0051301: cell division | 1.09E-02 |
| 32 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.27E-02 |
| 33 | GO:0009414: response to water deprivation | 1.66E-02 |
| 34 | GO:0009733: response to auxin | 1.83E-02 |
| 35 | GO:0007275: multicellular organism development | 2.73E-02 |
| 36 | GO:0007165: signal transduction | 2.85E-02 |
| 37 | GO:0009793: embryo development ending in seed dormancy | 3.07E-02 |
| 38 | GO:0016310: phosphorylation | 3.20E-02 |
| 39 | GO:0016567: protein ubiquitination | 3.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 2 | GO:0004810: tRNA adenylyltransferase activity | 0.00E+00 |
| 3 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 4.26E-06 |
| 4 | GO:0019781: NEDD8 activating enzyme activity | 1.18E-05 |
| 5 | GO:0008253: 5'-nucleotidase activity | 2.19E-05 |
| 6 | GO:0035198: miRNA binding | 3.41E-05 |
| 7 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 3.41E-05 |
| 8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.84E-05 |
| 9 | GO:0008641: small protein activating enzyme activity | 6.40E-05 |
| 10 | GO:0004559: alpha-mannosidase activity | 9.94E-05 |
| 11 | GO:0008320: protein transmembrane transporter activity | 1.19E-04 |
| 12 | GO:0005528: FK506 binding | 4.07E-04 |
| 13 | GO:0016779: nucleotidyltransferase activity | 4.91E-04 |
| 14 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.06E-03 |
| 15 | GO:0003723: RNA binding | 1.66E-03 |
| 16 | GO:0008565: protein transporter activity | 3.05E-03 |
| 17 | GO:0000166: nucleotide binding | 1.02E-02 |
| 18 | GO:0005509: calcium ion binding | 1.59E-02 |
| 19 | GO:0005515: protein binding | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036396: MIS complex | 0.00E+00 |
| 2 | GO:1990726: Lsm1-7-Pat1 complex | 3.41E-05 |
| 3 | GO:0005688: U6 snRNP | 1.39E-04 |
| 4 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 1.60E-04 |
| 5 | GO:0008180: COP9 signalosome | 1.83E-04 |
| 6 | GO:0071011: precatalytic spliceosome | 2.05E-04 |
| 7 | GO:0071013: catalytic step 2 spliceosome | 2.53E-04 |
| 8 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.54E-04 |
| 9 | GO:0005794: Golgi apparatus | 7.74E-04 |
| 10 | GO:0000932: P-body | 9.24E-04 |
| 11 | GO:0005788: endoplasmic reticulum lumen | 9.59E-04 |
| 12 | GO:0005783: endoplasmic reticulum | 1.44E-03 |
| 13 | GO:0009507: chloroplast | 1.45E-03 |
| 14 | GO:0000139: Golgi membrane | 2.04E-03 |
| 15 | GO:0016607: nuclear speck | 2.10E-03 |
| 16 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.46E-03 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 2.70E-03 |
| 18 | GO:0005623: cell | 2.75E-03 |
| 19 | GO:0005829: cytosol | 4.67E-03 |
| 20 | GO:0005777: peroxisome | 1.13E-02 |
| 21 | GO:0005802: trans-Golgi network | 1.43E-02 |
| 22 | GO:0005622: intracellular | 1.54E-02 |
| 23 | GO:0005768: endosome | 1.56E-02 |
| 24 | GO:0005789: endoplasmic reticulum membrane | 2.28E-02 |
| 25 | GO:0005886: plasma membrane | 4.90E-02 |