Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034757: negative regulation of iron ion transport2.75E-06
2GO:0010271: regulation of chlorophyll catabolic process7.70E-06
3GO:0010270: photosystem II oxygen evolving complex assembly7.70E-06
4GO:0080117: secondary growth1.45E-05
5GO:0048831: regulation of shoot system development5.52E-05
6GO:0006828: manganese ion transport5.52E-05
7GO:0048509: regulation of meristem development6.80E-05
8GO:0009657: plastid organization1.11E-04
9GO:0016573: histone acetylation1.44E-04
10GO:0006816: calcium ion transport1.78E-04
11GO:0006415: translational termination1.78E-04
12GO:0030048: actin filament-based movement2.14E-04
13GO:0006338: chromatin remodeling2.91E-04
14GO:0071215: cellular response to abscisic acid stimulus3.73E-04
15GO:0070417: cellular response to cold4.16E-04
16GO:0010087: phloem or xylem histogenesis4.37E-04
17GO:0010029: regulation of seed germination6.94E-04
18GO:0000160: phosphorelay signal transduction system8.20E-04
19GO:0009636: response to toxic substance1.17E-03
20GO:0009736: cytokinin-activated signaling pathway1.32E-03
21GO:0009909: regulation of flower development1.41E-03
22GO:0006396: RNA processing1.69E-03
23GO:0007623: circadian rhythm2.39E-03
24GO:0006970: response to osmotic stress3.37E-03
25GO:0046777: protein autophosphorylation3.88E-03
26GO:0048364: root development4.98E-03
27GO:0009416: response to light stimulus7.19E-03
28GO:0009414: response to water deprivation1.16E-02
29GO:0009737: response to abscisic acid2.02E-02
30GO:0016567: protein ubiquitination2.61E-02
31GO:0009651: response to salt stress2.80E-02
32GO:0006351: transcription, DNA-templated4.97E-02
RankGO TermAdjusted P value
1GO:0009884: cytokinin receptor activity7.70E-06
2GO:0005034: osmosensor activity1.45E-05
3GO:0016149: translation release factor activity, codon specific2.28E-05
4GO:0019900: kinase binding6.80E-05
5GO:0003747: translation release factor activity1.27E-04
6GO:0005384: manganese ion transmembrane transporter activity1.44E-04
7GO:0004673: protein histidine kinase activity1.60E-04
8GO:0015095: magnesium ion transmembrane transporter activity2.14E-04
9GO:0000155: phosphorelay sensor kinase activity2.14E-04
10GO:0003774: motor activity2.33E-04
11GO:0043424: protein histidine kinase binding3.11E-04
12GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors9.23E-04
13GO:0042802: identical protein binding2.81E-03
14GO:0004871: signal transducer activity4.33E-03
15GO:0044212: transcription regulatory region DNA binding1.18E-02
16GO:0016491: oxidoreductase activity1.43E-02
17GO:0046872: metal ion binding3.25E-02
18GO:0004674: protein serine/threonine kinase activity3.68E-02
RankGO TermAdjusted P value
1GO:0000123: histone acetyltransferase complex8.18E-05
2GO:0016459: myosin complex1.60E-04
3GO:0031969: chloroplast membrane1.78E-04
4GO:0005886: plasma membrane5.07E-03
5GO:0031225: anchored component of membrane9.82E-03
6GO:0005789: endoplasmic reticulum membrane1.59E-02
7GO:0009535: chloroplast thylakoid membrane2.09E-02
8GO:0009570: chloroplast stroma4.52E-02
9GO:0016021: integral component of membrane4.84E-02
Gene type



Gene DE type