Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0034976: response to endoplasmic reticulum stress3.08E-05
3GO:0051262: protein tetramerization5.37E-05
4GO:1900140: regulation of seedling development9.50E-05
5GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway9.50E-05
6GO:0048194: Golgi vesicle budding1.42E-04
7GO:0009627: systemic acquired resistance1.68E-04
8GO:0010200: response to chitin1.86E-04
9GO:0060548: negative regulation of cell death1.95E-04
10GO:0045727: positive regulation of translation1.95E-04
11GO:0045454: cell redox homeostasis2.27E-04
12GO:0010555: response to mannitol3.73E-04
13GO:2000067: regulation of root morphogenesis3.73E-04
14GO:0015977: carbon fixation3.73E-04
15GO:0046686: response to cadmium ion4.06E-04
16GO:0007186: G-protein coupled receptor signaling pathway5.74E-04
17GO:0010205: photoinhibition7.18E-04
18GO:0007064: mitotic sister chromatid cohesion7.94E-04
19GO:0006457: protein folding8.57E-04
20GO:0009750: response to fructose8.71E-04
21GO:0015706: nitrate transport9.50E-04
22GO:0006807: nitrogen compound metabolic process1.03E-03
23GO:0010150: leaf senescence1.04E-03
24GO:0042343: indole glucosinolate metabolic process1.20E-03
25GO:0010167: response to nitrate1.20E-03
26GO:0009617: response to bacterium1.23E-03
27GO:0098542: defense response to other organism1.56E-03
28GO:0044550: secondary metabolite biosynthetic process2.11E-03
29GO:0009409: response to cold2.17E-03
30GO:0009749: response to glucose2.39E-03
31GO:0006886: intracellular protein transport2.39E-03
32GO:0010183: pollen tube guidance2.39E-03
33GO:0006891: intra-Golgi vesicle-mediated transport2.50E-03
34GO:0030163: protein catabolic process2.73E-03
35GO:0009408: response to heat2.85E-03
36GO:0009615: response to virus3.21E-03
37GO:0042128: nitrate assimilation3.45E-03
38GO:0008219: cell death3.84E-03
39GO:0006499: N-terminal protein myristoylation4.10E-03
40GO:0048527: lateral root development4.24E-03
41GO:0010043: response to zinc ion4.24E-03
42GO:0006099: tricarboxylic acid cycle4.65E-03
43GO:0009744: response to sucrose5.37E-03
44GO:0009644: response to high light intensity5.66E-03
45GO:0006508: proteolysis6.12E-03
46GO:0009846: pollen germination6.27E-03
47GO:0009651: response to salt stress6.85E-03
48GO:0006096: glycolytic process7.40E-03
49GO:0009742: brassinosteroid mediated signaling pathway8.77E-03
50GO:0009058: biosynthetic process1.02E-02
51GO:0016036: cellular response to phosphate starvation1.18E-02
52GO:0040008: regulation of growth1.20E-02
53GO:0007166: cell surface receptor signaling pathway1.36E-02
54GO:0010468: regulation of gene expression1.40E-02
55GO:0048366: leaf development1.89E-02
56GO:0080167: response to karrikin1.96E-02
57GO:0006468: protein phosphorylation1.98E-02
58GO:0007275: multicellular organism development2.00E-02
59GO:0015979: photosynthesis2.16E-02
60GO:0009737: response to abscisic acid2.17E-02
61GO:0009734: auxin-activated signaling pathway3.31E-02
62GO:0009416: response to light stimulus3.90E-02
63GO:0009555: pollen development3.90E-02
64GO:0009611: response to wounding3.96E-02
65GO:0035556: intracellular signal transduction4.05E-02
66GO:0006511: ubiquitin-dependent protein catabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0004190: aspartic-type endopeptidase activity1.80E-07
2GO:0004338: glucan exo-1,3-beta-glucosidase activity5.37E-05
3GO:0004634: phosphopyruvate hydratase activity5.37E-05
4GO:0003756: protein disulfide isomerase activity5.99E-05
5GO:0001664: G-protein coupled receptor binding9.50E-05
6GO:0004148: dihydrolipoyl dehydrogenase activity9.50E-05
7GO:0031683: G-protein beta/gamma-subunit complex binding9.50E-05
8GO:0008964: phosphoenolpyruvate carboxylase activity9.50E-05
9GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity3.11E-04
10GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity3.11E-04
11GO:0004012: phospholipid-translocating ATPase activity3.73E-04
12GO:0004714: transmembrane receptor protein tyrosine kinase activity5.05E-04
13GO:0015112: nitrate transmembrane transporter activity7.18E-04
14GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.03E-03
15GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.11E-03
16GO:0003712: transcription cofactor activity1.20E-03
17GO:0000287: magnesium ion binding1.55E-03
18GO:0004298: threonine-type endopeptidase activity1.56E-03
19GO:0033612: receptor serine/threonine kinase binding1.56E-03
20GO:0008810: cellulase activity1.76E-03
21GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.50E-03
22GO:0030247: polysaccharide binding3.58E-03
23GO:0050897: cobalt ion binding4.24E-03
24GO:0000987: core promoter proximal region sequence-specific DNA binding4.65E-03
25GO:0005507: copper ion binding7.13E-03
26GO:0019825: oxygen binding7.13E-03
27GO:0005524: ATP binding7.90E-03
28GO:0005506: iron ion binding9.99E-03
29GO:0030170: pyridoxal phosphate binding1.06E-02
30GO:0008565: protein transporter activity1.12E-02
31GO:0004674: protein serine/threonine kinase activity1.12E-02
32GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.18E-02
33GO:0004672: protein kinase activity1.49E-02
34GO:0020037: heme binding1.61E-02
35GO:0003682: chromatin binding1.75E-02
36GO:0043531: ADP binding1.80E-02
37GO:0050660: flavin adenine dinucleotide binding1.87E-02
38GO:0008233: peptidase activity1.94E-02
39GO:0004497: monooxygenase activity1.96E-02
40GO:0004871: signal transducer activity2.31E-02
41GO:0003924: GTPase activity2.59E-02
42GO:0016757: transferase activity, transferring glycosyl groups3.46E-02
43GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.75E-02
RankGO TermAdjusted P value
1GO:0005783: endoplasmic reticulum2.02E-05
2GO:0000015: phosphopyruvate hydratase complex5.37E-05
3GO:0005788: endoplasmic reticulum lumen1.58E-04
4GO:0030660: Golgi-associated vesicle membrane1.95E-04
5GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.95E-04
6GO:0048046: apoplast2.60E-04
7GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.05E-04
8GO:0019773: proteasome core complex, alpha-subunit complex5.74E-04
9GO:0005740: mitochondrial envelope7.94E-04
10GO:0005765: lysosomal membrane8.71E-04
11GO:0005886: plasma membrane1.03E-03
12GO:0005795: Golgi stack1.20E-03
13GO:0005741: mitochondrial outer membrane1.56E-03
14GO:0005839: proteasome core complex1.56E-03
15GO:0090406: pollen tube5.37E-03
16GO:0000502: proteasome complex6.59E-03
17GO:0005774: vacuolar membrane7.13E-03
18GO:0005747: mitochondrial respiratory chain complex I7.57E-03
19GO:0005834: heterotrimeric G-protein complex7.73E-03
20GO:0016020: membrane9.53E-03
21GO:0005759: mitochondrial matrix1.16E-02
22GO:0009507: chloroplast1.26E-02
23GO:0016021: integral component of membrane1.40E-02
24GO:0046658: anchored component of plasma membrane1.51E-02
25GO:0005829: cytosol3.38E-02
26GO:0022626: cytosolic ribosome3.78E-02
27GO:0009506: plasmodesma3.86E-02
28GO:0005618: cell wall4.03E-02
29GO:0005777: peroxisome4.30E-02
Gene type



Gene DE type