Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048015: phosphatidylinositol-mediated signaling3.46E-07
2GO:0009727: detection of ethylene stimulus2.78E-05
3GO:0046488: phosphatidylinositol metabolic process2.78E-05
4GO:0032012: regulation of ARF protein signal transduction5.03E-05
5GO:1900140: regulation of seedling development5.03E-05
6GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway5.03E-05
7GO:0006473: protein acetylation5.03E-05
8GO:0048194: Golgi vesicle budding7.70E-05
9GO:1901000: regulation of response to salt stress7.70E-05
10GO:0045723: positive regulation of fatty acid biosynthetic process1.07E-04
11GO:0050665: hydrogen peroxide biosynthetic process1.74E-04
12GO:0048367: shoot system development2.30E-04
13GO:0000122: negative regulation of transcription from RNA polymerase II promoter2.50E-04
14GO:0009690: cytokinin metabolic process2.90E-04
15GO:0016573: histone acetylation4.18E-04
16GO:0072593: reactive oxygen species metabolic process5.09E-04
17GO:0052544: defense response by callose deposition in cell wall5.09E-04
18GO:0010105: negative regulation of ethylene-activated signaling pathway5.55E-04
19GO:0055046: microgametogenesis6.04E-04
20GO:0002237: response to molecule of bacterial origin6.53E-04
21GO:0046854: phosphatidylinositol phosphorylation7.02E-04
22GO:0042023: DNA endoreduplication7.53E-04
23GO:0016575: histone deacetylation8.59E-04
24GO:0016192: vesicle-mediated transport9.07E-04
25GO:0001944: vasculature development1.02E-03
26GO:0009625: response to insect1.02E-03
27GO:0010091: trichome branching1.08E-03
28GO:0009561: megagametogenesis1.08E-03
29GO:0010182: sugar mediated signaling pathway1.25E-03
30GO:0048364: root development1.30E-03
31GO:0071281: cellular response to iron ion1.56E-03
32GO:0016579: protein deubiquitination1.76E-03
33GO:0009908: flower development1.97E-03
34GO:0006888: ER to Golgi vesicle-mediated transport2.04E-03
35GO:0010311: lateral root formation2.26E-03
36GO:0009651: response to salt stress2.30E-03
37GO:0010119: regulation of stomatal movement2.41E-03
38GO:0006897: endocytosis2.88E-03
39GO:0008283: cell proliferation3.04E-03
40GO:0009644: response to high light intensity3.20E-03
41GO:0009739: response to gibberellin7.45E-03
42GO:0009737: response to abscisic acid9.27E-03
43GO:0006970: response to osmotic stress9.84E-03
44GO:0009723: response to ethylene1.03E-02
45GO:0048366: leaf development1.05E-02
46GO:0045892: negative regulation of transcription, DNA-templated1.25E-02
47GO:0006886: intracellular protein transport1.26E-02
48GO:0016567: protein ubiquitination1.33E-02
49GO:0009751: response to salicylic acid1.42E-02
50GO:0009408: response to heat1.43E-02
51GO:0006397: mRNA processing1.47E-02
52GO:0009873: ethylene-activated signaling pathway1.72E-02
53GO:0051301: cell division2.29E-02
54GO:0006511: ubiquitin-dependent protein catabolic process2.68E-02
55GO:0042742: defense response to bacterium3.56E-02
56GO:0006979: response to oxidative stress3.58E-02
57GO:0009733: response to auxin3.87E-02
58GO:0015031: protein transport4.22E-02
59GO:0009409: response to cold4.42E-02
60GO:0006810: transport4.68E-02
RankGO TermAdjusted P value
1GO:0005548: phospholipid transporter activity0.00E+00
2GO:0016303: 1-phosphatidylinositol-3-kinase activity1.04E-05
3GO:0038199: ethylene receptor activity2.78E-05
4GO:0051740: ethylene binding7.70E-05
5GO:0005086: ARF guanyl-nucleotide exchange factor activity1.07E-04
6GO:0001106: RNA polymerase II transcription corepressor activity1.07E-04
7GO:0042578: phosphoric ester hydrolase activity1.74E-04
8GO:0004012: phospholipid-translocating ATPase activity2.11E-04
9GO:0005085: guanyl-nucleotide exchange factor activity2.50E-04
10GO:0016874: ligase activity2.53E-04
11GO:0031490: chromatin DNA binding4.18E-04
12GO:0004673: protein histidine kinase activity4.63E-04
13GO:0000155: phosphorelay sensor kinase activity6.04E-04
14GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism6.04E-04
15GO:0003712: transcription cofactor activity7.02E-04
16GO:0004407: histone deacetylase activity8.05E-04
17GO:0036459: thiol-dependent ubiquitinyl hydrolase activity9.11E-04
18GO:0004402: histone acetyltransferase activity1.19E-03
19GO:0003713: transcription coactivator activity1.25E-03
20GO:0004843: thiol-dependent ubiquitin-specific protease activity1.44E-03
21GO:0000156: phosphorelay response regulator activity1.56E-03
22GO:0042802: identical protein binding8.14E-03
23GO:0000287: magnesium ion binding9.22E-03
24GO:0000166: nucleotide binding2.15E-02
25GO:0016740: transferase activity2.48E-02
26GO:0008270: zinc ion binding2.98E-02
27GO:0005215: transporter activity3.82E-02
28GO:0004842: ubiquitin-protein transferase activity4.48E-02
RankGO TermAdjusted P value
1GO:0005942: phosphatidylinositol 3-kinase complex0.00E+00
2GO:0030127: COPII vesicle coat1.74E-04
3GO:0032588: trans-Golgi network membrane1.74E-04
4GO:0000118: histone deacetylase complex2.11E-04
5GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane2.50E-04
6GO:0000139: Golgi membrane7.48E-04
7GO:0005789: endoplasmic reticulum membrane8.68E-04
8GO:0000785: chromatin1.50E-03
9GO:0005802: trans-Golgi network3.46E-03
10GO:0005768: endosome3.93E-03
11GO:0010008: endosome membrane4.26E-03
12GO:0005829: cytosol7.35E-03
13GO:0080008: Cul4-RING E3 ubiquitin ligase complex9.97E-03
14GO:0005794: Golgi apparatus1.93E-02
15GO:0005622: intracellular3.24E-02
16GO:0009505: plant-type cell wall4.18E-02
Gene type



Gene DE type