GO Enrichment Analysis of Co-expressed Genes with
AT3G47430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015843: methylammonium transport | 0.00E+00 |
| 2 | GO:0015822: ornithine transport | 0.00E+00 |
| 3 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 4 | GO:0036172: thiamine salvage | 0.00E+00 |
| 5 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 6 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 7 | GO:0006659: phosphatidylserine biosynthetic process | 2.19E-05 |
| 8 | GO:0019605: butyrate metabolic process | 2.19E-05 |
| 9 | GO:0006083: acetate metabolic process | 2.19E-05 |
| 10 | GO:0000066: mitochondrial ornithine transport | 2.19E-05 |
| 11 | GO:1901349: glucosinolate transport | 2.19E-05 |
| 12 | GO:0090449: phloem glucosinolate loading | 2.19E-05 |
| 13 | GO:0005977: glycogen metabolic process | 9.94E-05 |
| 14 | GO:0006011: UDP-glucose metabolic process | 9.94E-05 |
| 15 | GO:0015696: ammonium transport | 1.49E-04 |
| 16 | GO:0042823: pyridoxal phosphate biosynthetic process | 1.49E-04 |
| 17 | GO:0080167: response to karrikin | 1.93E-04 |
| 18 | GO:0006546: glycine catabolic process | 2.04E-04 |
| 19 | GO:0006021: inositol biosynthetic process | 2.04E-04 |
| 20 | GO:0070534: protein K63-linked ubiquitination | 2.04E-04 |
| 21 | GO:0048442: sepal development | 2.04E-04 |
| 22 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.04E-04 |
| 23 | GO:0009765: photosynthesis, light harvesting | 2.04E-04 |
| 24 | GO:0072488: ammonium transmembrane transport | 2.04E-04 |
| 25 | GO:0006097: glyoxylate cycle | 2.62E-04 |
| 26 | GO:0009229: thiamine diphosphate biosynthetic process | 2.62E-04 |
| 27 | GO:0016094: polyprenol biosynthetic process | 2.62E-04 |
| 28 | GO:0019408: dolichol biosynthetic process | 2.62E-04 |
| 29 | GO:0016120: carotene biosynthetic process | 2.62E-04 |
| 30 | GO:0050665: hydrogen peroxide biosynthetic process | 3.24E-04 |
| 31 | GO:0010942: positive regulation of cell death | 3.24E-04 |
| 32 | GO:0006301: postreplication repair | 3.24E-04 |
| 33 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 3.24E-04 |
| 34 | GO:0009228: thiamine biosynthetic process | 3.24E-04 |
| 35 | GO:0010076: maintenance of floral meristem identity | 3.89E-04 |
| 36 | GO:0017148: negative regulation of translation | 3.89E-04 |
| 37 | GO:0009854: oxidative photosynthetic carbon pathway | 3.89E-04 |
| 38 | GO:0052543: callose deposition in cell wall | 5.25E-04 |
| 39 | GO:0022900: electron transport chain | 5.98E-04 |
| 40 | GO:0048441: petal development | 8.27E-04 |
| 41 | GO:0000272: polysaccharide catabolic process | 9.07E-04 |
| 42 | GO:0048440: carpel development | 1.16E-03 |
| 43 | GO:0042343: indole glucosinolate metabolic process | 1.25E-03 |
| 44 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.34E-03 |
| 45 | GO:0006833: water transport | 1.34E-03 |
| 46 | GO:0006487: protein N-linked glycosylation | 1.43E-03 |
| 47 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.53E-03 |
| 48 | GO:0098542: defense response to other organism | 1.63E-03 |
| 49 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.73E-03 |
| 50 | GO:0048443: stamen development | 1.94E-03 |
| 51 | GO:0016117: carotenoid biosynthetic process | 2.04E-03 |
| 52 | GO:0034220: ion transmembrane transport | 2.15E-03 |
| 53 | GO:0008654: phospholipid biosynthetic process | 2.49E-03 |
| 54 | GO:0009791: post-embryonic development | 2.49E-03 |
| 55 | GO:0006810: transport | 2.61E-03 |
| 56 | GO:0018298: protein-chromophore linkage | 4.00E-03 |
| 57 | GO:0010218: response to far red light | 4.28E-03 |
| 58 | GO:0009637: response to blue light | 4.70E-03 |
| 59 | GO:0009853: photorespiration | 4.70E-03 |
| 60 | GO:0006839: mitochondrial transport | 5.15E-03 |
| 61 | GO:0010114: response to red light | 5.60E-03 |
| 62 | GO:0042546: cell wall biogenesis | 5.75E-03 |
| 63 | GO:0000209: protein polyubiquitination | 5.75E-03 |
| 64 | GO:0000165: MAPK cascade | 6.39E-03 |
| 65 | GO:0031347: regulation of defense response | 6.39E-03 |
| 66 | GO:0006486: protein glycosylation | 6.88E-03 |
| 67 | GO:0006857: oligopeptide transport | 7.21E-03 |
| 68 | GO:0009624: response to nematode | 8.79E-03 |
| 69 | GO:0009414: response to water deprivation | 1.05E-02 |
| 70 | GO:0006633: fatty acid biosynthetic process | 1.21E-02 |
| 71 | GO:0055114: oxidation-reduction process | 1.25E-02 |
| 72 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 1.67E-02 |
| 73 | GO:0046686: response to cadmium ion | 1.69E-02 |
| 74 | GO:0009723: response to ethylene | 1.95E-02 |
| 75 | GO:0044550: secondary metabolite biosynthetic process | 2.18E-02 |
| 76 | GO:0015979: photosynthesis | 2.25E-02 |
| 77 | GO:0009416: response to light stimulus | 4.07E-02 |
| 78 | GO:0009555: pollen development | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 2 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 3 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 4 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 5 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 6 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 7 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 8 | GO:0033961: cis-stilbene-oxide hydrolase activity | 0.00E+00 |
| 9 | GO:0047760: butyrate-CoA ligase activity | 2.19E-05 |
| 10 | GO:0090448: glucosinolate:proton symporter activity | 2.19E-05 |
| 11 | GO:0003987: acetate-CoA ligase activity | 2.19E-05 |
| 12 | GO:0010313: phytochrome binding | 2.19E-05 |
| 13 | GO:0000064: L-ornithine transmembrane transporter activity | 5.64E-05 |
| 14 | GO:0004512: inositol-3-phosphate synthase activity | 5.64E-05 |
| 15 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 9.94E-05 |
| 16 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 1.49E-04 |
| 17 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.49E-04 |
| 18 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.49E-04 |
| 19 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.49E-04 |
| 20 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.49E-04 |
| 21 | GO:0048027: mRNA 5'-UTR binding | 1.49E-04 |
| 22 | GO:0008891: glycolate oxidase activity | 2.04E-04 |
| 23 | GO:0004301: epoxide hydrolase activity | 2.04E-04 |
| 24 | GO:0008453: alanine-glyoxylate transaminase activity | 2.04E-04 |
| 25 | GO:0002094: polyprenyltransferase activity | 2.62E-04 |
| 26 | GO:0045547: dehydrodolichyl diphosphate synthase activity | 2.62E-04 |
| 27 | GO:0016208: AMP binding | 3.24E-04 |
| 28 | GO:0008519: ammonium transmembrane transporter activity | 3.24E-04 |
| 29 | GO:0102229: amylopectin maltohydrolase activity | 3.24E-04 |
| 30 | GO:0016161: beta-amylase activity | 3.89E-04 |
| 31 | GO:0031625: ubiquitin protein ligase binding | 5.16E-04 |
| 32 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.34E-03 |
| 33 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.34E-03 |
| 34 | GO:0031409: pigment binding | 1.34E-03 |
| 35 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.34E-03 |
| 36 | GO:0003824: catalytic activity | 1.81E-03 |
| 37 | GO:0061630: ubiquitin protein ligase activity | 2.17E-03 |
| 38 | GO:0008080: N-acetyltransferase activity | 2.26E-03 |
| 39 | GO:0010181: FMN binding | 2.38E-03 |
| 40 | GO:0004518: nuclease activity | 2.73E-03 |
| 41 | GO:0015250: water channel activity | 3.34E-03 |
| 42 | GO:0016168: chlorophyll binding | 3.47E-03 |
| 43 | GO:0008375: acetylglucosaminyltransferase activity | 3.60E-03 |
| 44 | GO:0003993: acid phosphatase activity | 4.85E-03 |
| 45 | GO:0051537: 2 iron, 2 sulfur cluster binding | 5.91E-03 |
| 46 | GO:0016757: transferase activity, transferring glycosyl groups | 7.55E-03 |
| 47 | GO:0016746: transferase activity, transferring acyl groups | 8.97E-03 |
| 48 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.13E-02 |
| 49 | GO:0005215: transporter activity | 1.20E-02 |
| 50 | GO:0004842: ubiquitin-protein transferase activity | 1.50E-02 |
| 51 | GO:0046872: metal ion binding | 1.69E-02 |
| 52 | GO:0046982: protein heterodimerization activity | 1.74E-02 |
| 53 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.46E-02 |
| 54 | GO:0004722: protein serine/threonine phosphatase activity | 2.49E-02 |
| 55 | GO:0009055: electron carrier activity | 2.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009509: chromoplast | 9.94E-05 |
| 2 | GO:0005960: glycine cleavage complex | 1.49E-04 |
| 3 | GO:0031372: UBC13-MMS2 complex | 2.04E-04 |
| 4 | GO:0016020: membrane | 2.99E-04 |
| 5 | GO:0009507: chloroplast | 3.27E-04 |
| 6 | GO:0005777: peroxisome | 8.00E-04 |
| 7 | GO:0009570: chloroplast stroma | 8.48E-04 |
| 8 | GO:0019013: viral nucleocapsid | 1.07E-03 |
| 9 | GO:0030076: light-harvesting complex | 1.25E-03 |
| 10 | GO:0009522: photosystem I | 2.38E-03 |
| 11 | GO:0009523: photosystem II | 2.49E-03 |
| 12 | GO:0005887: integral component of plasma membrane | 4.09E-03 |
| 13 | GO:0009534: chloroplast thylakoid | 6.44E-03 |
| 14 | GO:0048046: apoplast | 8.22E-03 |
| 15 | GO:0010287: plastoglobule | 9.91E-03 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 1.03E-02 |
| 17 | GO:0009941: chloroplast envelope | 1.14E-02 |
| 18 | GO:0000139: Golgi membrane | 1.47E-02 |
| 19 | GO:0005783: endoplasmic reticulum | 1.88E-02 |
| 20 | GO:0031969: chloroplast membrane | 2.05E-02 |
| 21 | GO:0005743: mitochondrial inner membrane | 2.57E-02 |
| 22 | GO:0016021: integral component of membrane | 3.77E-02 |
| 23 | GO:0009579: thylakoid | 4.63E-02 |
| 24 | GO:0005886: plasma membrane | 4.93E-02 |