GO Enrichment Analysis of Co-expressed Genes with
AT3G47060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000390: spliceosomal complex disassembly | 0.00E+00 |
| 2 | GO:0033955: mitochondrial DNA inheritance | 0.00E+00 |
| 3 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 4 | GO:0016236: macroautophagy | 0.00E+00 |
| 5 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 6 | GO:0031338: regulation of vesicle fusion | 2.88E-05 |
| 7 | GO:0048455: stamen formation | 2.88E-05 |
| 8 | GO:0009846: pollen germination | 2.88E-05 |
| 9 | GO:0030242: pexophagy | 2.88E-05 |
| 10 | GO:0019673: GDP-mannose metabolic process | 2.88E-05 |
| 11 | GO:0050684: regulation of mRNA processing | 7.28E-05 |
| 12 | GO:0007584: response to nutrient | 7.28E-05 |
| 13 | GO:0051788: response to misfolded protein | 7.28E-05 |
| 14 | GO:0032012: regulation of ARF protein signal transduction | 1.27E-04 |
| 15 | GO:0032784: regulation of DNA-templated transcription, elongation | 1.27E-04 |
| 16 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 1.27E-04 |
| 17 | GO:0090630: activation of GTPase activity | 1.27E-04 |
| 18 | GO:0006623: protein targeting to vacuole | 1.44E-04 |
| 19 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.47E-04 |
| 20 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.54E-04 |
| 21 | GO:0051601: exocyst localization | 1.89E-04 |
| 22 | GO:0048194: Golgi vesicle budding | 1.89E-04 |
| 23 | GO:2001289: lipid X metabolic process | 1.89E-04 |
| 24 | GO:0010107: potassium ion import | 2.57E-04 |
| 25 | GO:0045324: late endosome to vacuole transport | 2.57E-04 |
| 26 | GO:0034052: positive regulation of plant-type hypersensitive response | 3.30E-04 |
| 27 | GO:0006751: glutathione catabolic process | 4.06E-04 |
| 28 | GO:0043248: proteasome assembly | 4.06E-04 |
| 29 | GO:0048280: vesicle fusion with Golgi apparatus | 4.86E-04 |
| 30 | GO:0048528: post-embryonic root development | 5.68E-04 |
| 31 | GO:0006875: cellular metal ion homeostasis | 6.55E-04 |
| 32 | GO:0060321: acceptance of pollen | 7.44E-04 |
| 33 | GO:0006298: mismatch repair | 1.03E-03 |
| 34 | GO:0006896: Golgi to vacuole transport | 1.03E-03 |
| 35 | GO:0009555: pollen development | 1.03E-03 |
| 36 | GO:0000398: mRNA splicing, via spliceosome | 1.04E-03 |
| 37 | GO:0006829: zinc II ion transport | 1.34E-03 |
| 38 | GO:0006289: nucleotide-excision repair | 1.79E-03 |
| 39 | GO:0042147: retrograde transport, endosome to Golgi | 2.57E-03 |
| 40 | GO:0010501: RNA secondary structure unwinding | 2.70E-03 |
| 41 | GO:0010118: stomatal movement | 2.70E-03 |
| 42 | GO:0048366: leaf development | 2.75E-03 |
| 43 | GO:0042752: regulation of circadian rhythm | 2.99E-03 |
| 44 | GO:0009630: gravitropism | 3.43E-03 |
| 45 | GO:0006886: intracellular protein transport | 3.56E-03 |
| 46 | GO:0030163: protein catabolic process | 3.58E-03 |
| 47 | GO:0016579: protein deubiquitination | 4.05E-03 |
| 48 | GO:0010029: regulation of seed germination | 4.37E-03 |
| 49 | GO:0006974: cellular response to DNA damage stimulus | 4.54E-03 |
| 50 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.71E-03 |
| 51 | GO:0016049: cell growth | 4.88E-03 |
| 52 | GO:0048481: plant ovule development | 5.05E-03 |
| 53 | GO:0048767: root hair elongation | 5.22E-03 |
| 54 | GO:0016051: carbohydrate biosynthetic process | 5.94E-03 |
| 55 | GO:0030001: metal ion transport | 6.50E-03 |
| 56 | GO:0006887: exocytosis | 6.69E-03 |
| 57 | GO:0009744: response to sucrose | 7.08E-03 |
| 58 | GO:0000209: protein polyubiquitination | 7.28E-03 |
| 59 | GO:0035556: intracellular signal transduction | 7.93E-03 |
| 60 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 8.09E-03 |
| 61 | GO:0006417: regulation of translation | 9.36E-03 |
| 62 | GO:0048367: shoot system development | 1.00E-02 |
| 63 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.02E-02 |
| 64 | GO:0009626: plant-type hypersensitive response | 1.02E-02 |
| 65 | GO:0018105: peptidyl-serine phosphorylation | 1.14E-02 |
| 66 | GO:0009742: brassinosteroid mediated signaling pathway | 1.16E-02 |
| 67 | GO:0010150: leaf senescence | 1.64E-02 |
| 68 | GO:0006470: protein dephosphorylation | 1.81E-02 |
| 69 | GO:0009826: unidimensional cell growth | 2.18E-02 |
| 70 | GO:0009860: pollen tube growth | 2.36E-02 |
| 71 | GO:0046777: protein autophosphorylation | 2.74E-02 |
| 72 | GO:0006869: lipid transport | 3.17E-02 |
| 73 | GO:0006468: protein phosphorylation | 3.30E-02 |
| 74 | GO:0009408: response to heat | 3.45E-02 |
| 75 | GO:0006281: DNA repair | 3.45E-02 |
| 76 | GO:0048364: root development | 3.55E-02 |
| 77 | GO:0009735: response to cytokinin | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990446: U1 snRNP binding | 0.00E+00 |
| 2 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 3 | GO:0005548: phospholipid transporter activity | 0.00E+00 |
| 4 | GO:0015616: DNA translocase activity | 0.00E+00 |
| 5 | GO:0008446: GDP-mannose 4,6-dehydratase activity | 2.88E-05 |
| 6 | GO:0001653: peptide receptor activity | 1.89E-04 |
| 7 | GO:0005086: ARF guanyl-nucleotide exchange factor activity | 2.57E-04 |
| 8 | GO:0017137: Rab GTPase binding | 3.30E-04 |
| 9 | GO:0031593: polyubiquitin binding | 4.06E-04 |
| 10 | GO:0000149: SNARE binding | 4.15E-04 |
| 11 | GO:0004012: phospholipid-translocating ATPase activity | 4.86E-04 |
| 12 | GO:0005085: guanyl-nucleotide exchange factor activity | 5.68E-04 |
| 13 | GO:0005267: potassium channel activity | 7.44E-04 |
| 14 | GO:0015020: glucuronosyltransferase activity | 1.03E-03 |
| 15 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.34E-03 |
| 16 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.04E-03 |
| 17 | GO:0046873: metal ion transmembrane transporter activity | 2.84E-03 |
| 18 | GO:0004872: receptor activity | 3.13E-03 |
| 19 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 3.28E-03 |
| 20 | GO:0003684: damaged DNA binding | 3.73E-03 |
| 21 | GO:0003729: mRNA binding | 4.11E-03 |
| 22 | GO:0008375: acetylglucosaminyltransferase activity | 4.54E-03 |
| 23 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 4.54E-03 |
| 24 | GO:0004004: ATP-dependent RNA helicase activity | 4.71E-03 |
| 25 | GO:0004683: calmodulin-dependent protein kinase activity | 4.71E-03 |
| 26 | GO:0005096: GTPase activator activity | 5.22E-03 |
| 27 | GO:0003697: single-stranded DNA binding | 5.94E-03 |
| 28 | GO:0005484: SNAP receptor activity | 7.08E-03 |
| 29 | GO:0003723: RNA binding | 8.70E-03 |
| 30 | GO:0015171: amino acid transmembrane transporter activity | 9.36E-03 |
| 31 | GO:0008026: ATP-dependent helicase activity | 1.16E-02 |
| 32 | GO:0005515: protein binding | 1.44E-02 |
| 33 | GO:0015144: carbohydrate transmembrane transporter activity | 1.48E-02 |
| 34 | GO:0005351: sugar:proton symporter activity | 1.62E-02 |
| 35 | GO:0004674: protein serine/threonine kinase activity | 1.88E-02 |
| 36 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.95E-02 |
| 37 | GO:0000287: magnesium ion binding | 2.21E-02 |
| 38 | GO:0046982: protein heterodimerization activity | 2.21E-02 |
| 39 | GO:0050660: flavin adenine dinucleotide binding | 2.48E-02 |
| 40 | GO:0061630: ubiquitin protein ligase activity | 2.71E-02 |
| 41 | GO:0004722: protein serine/threonine phosphatase activity | 3.17E-02 |
| 42 | GO:0009055: electron carrier activity | 3.62E-02 |
| 43 | GO:0016887: ATPase activity | 4.71E-02 |
| 44 | GO:0005524: ATP binding | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071008: U2-type post-mRNA release spliceosomal complex | 0.00E+00 |
| 2 | GO:0071942: XPC complex | 0.00E+00 |
| 3 | GO:0000111: nucleotide-excision repair factor 2 complex | 0.00E+00 |
| 4 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 5 | GO:0031981: nuclear lumen | 0.00E+00 |
| 6 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 2.88E-05 |
| 7 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 2.88E-05 |
| 8 | GO:0005794: Golgi apparatus | 3.10E-05 |
| 9 | GO:0005770: late endosome | 1.23E-04 |
| 10 | GO:0005829: cytosol | 3.31E-04 |
| 11 | GO:0030140: trans-Golgi network transport vesicle | 4.06E-04 |
| 12 | GO:0031902: late endosome membrane | 4.50E-04 |
| 13 | GO:0012507: ER to Golgi transport vesicle membrane | 6.55E-04 |
| 14 | GO:0005789: endoplasmic reticulum membrane | 7.44E-04 |
| 15 | GO:0008540: proteasome regulatory particle, base subcomplex | 9.29E-04 |
| 16 | GO:0017119: Golgi transport complex | 1.03E-03 |
| 17 | GO:0005802: trans-Golgi network | 1.85E-03 |
| 18 | GO:0016020: membrane | 2.55E-03 |
| 19 | GO:0000145: exocyst | 3.43E-03 |
| 20 | GO:0000139: Golgi membrane | 3.65E-03 |
| 21 | GO:0016021: integral component of membrane | 4.72E-03 |
| 22 | GO:0005643: nuclear pore | 5.05E-03 |
| 23 | GO:0000325: plant-type vacuole | 5.58E-03 |
| 24 | GO:0000786: nucleosome | 5.76E-03 |
| 25 | GO:0031201: SNARE complex | 6.69E-03 |
| 26 | GO:0005856: cytoskeleton | 7.68E-03 |
| 27 | GO:0000502: proteasome complex | 8.71E-03 |
| 28 | GO:0012505: endomembrane system | 1.09E-02 |
| 29 | GO:0005622: intracellular | 1.34E-02 |
| 30 | GO:0009524: phragmoplast | 1.36E-02 |
| 31 | GO:0005768: endosome | 1.37E-02 |
| 32 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.39E-02 |