Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G46930

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033587: shikimate biosynthetic process0.00E+00
2GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
3GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
4GO:0070291: N-acylethanolamine metabolic process0.00E+00
5GO:0000188: inactivation of MAPK activity0.00E+00
6GO:0048227: plasma membrane to endosome transport0.00E+00
7GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
8GO:0006182: cGMP biosynthetic process0.00E+00
9GO:0009991: response to extracellular stimulus0.00E+00
10GO:0006592: ornithine biosynthetic process0.00E+00
11GO:0006593: ornithine catabolic process0.00E+00
12GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
13GO:0043269: regulation of ion transport0.00E+00
14GO:0010111: glyoxysome organization0.00E+00
15GO:0010360: negative regulation of anion channel activity0.00E+00
16GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
17GO:0010150: leaf senescence3.58E-05
18GO:0006561: proline biosynthetic process1.36E-04
19GO:0046777: protein autophosphorylation2.08E-04
20GO:0045454: cell redox homeostasis2.67E-04
21GO:0035344: hypoxanthine transport3.02E-04
22GO:0019544: arginine catabolic process to glutamate3.02E-04
23GO:1902361: mitochondrial pyruvate transmembrane transport3.02E-04
24GO:0098721: uracil import across plasma membrane3.02E-04
25GO:0098702: adenine import across plasma membrane3.02E-04
26GO:0080120: CAAX-box protein maturation3.02E-04
27GO:0046167: glycerol-3-phosphate biosynthetic process3.02E-04
28GO:0098710: guanine import across plasma membrane3.02E-04
29GO:0071586: CAAX-box protein processing3.02E-04
30GO:0006431: methionyl-tRNA aminoacylation3.02E-04
31GO:0051245: negative regulation of cellular defense response3.02E-04
32GO:0010036: response to boron-containing substance3.02E-04
33GO:0016559: peroxisome fission3.05E-04
34GO:0009061: anaerobic respiration3.05E-04
35GO:0030968: endoplasmic reticulum unfolded protein response3.75E-04
36GO:0006635: fatty acid beta-oxidation3.93E-04
37GO:0008202: steroid metabolic process5.34E-04
38GO:0043069: negative regulation of programmed cell death6.23E-04
39GO:0007154: cell communication6.60E-04
40GO:0019441: tryptophan catabolic process to kynurenine6.60E-04
41GO:0052542: defense response by callose deposition6.60E-04
42GO:0051258: protein polymerization6.60E-04
43GO:0019395: fatty acid oxidation6.60E-04
44GO:0006641: triglyceride metabolic process6.60E-04
45GO:0080029: cellular response to boron-containing substance levels6.60E-04
46GO:0019483: beta-alanine biosynthetic process6.60E-04
47GO:0006850: mitochondrial pyruvate transport6.60E-04
48GO:0015865: purine nucleotide transport6.60E-04
49GO:0006212: uracil catabolic process6.60E-04
50GO:0000266: mitochondrial fission8.22E-04
51GO:0055046: microgametogenesis9.29E-04
52GO:0010359: regulation of anion channel activity1.07E-03
53GO:0061158: 3'-UTR-mediated mRNA destabilization1.07E-03
54GO:0051646: mitochondrion localization1.07E-03
55GO:0002230: positive regulation of defense response to virus by host1.07E-03
56GO:0048281: inflorescence morphogenesis1.07E-03
57GO:0019563: glycerol catabolic process1.07E-03
58GO:0046686: response to cadmium ion1.42E-03
59GO:0006631: fatty acid metabolic process1.47E-03
60GO:0009399: nitrogen fixation1.53E-03
61GO:1902290: positive regulation of defense response to oomycetes1.53E-03
62GO:0015700: arsenite transport1.53E-03
63GO:0001676: long-chain fatty acid metabolic process1.53E-03
64GO:0010116: positive regulation of abscisic acid biosynthetic process1.53E-03
65GO:0051259: protein oligomerization1.53E-03
66GO:0046713: borate transport1.53E-03
67GO:0006624: vacuolar protein processing1.53E-03
68GO:0006612: protein targeting to membrane1.53E-03
69GO:0046902: regulation of mitochondrial membrane permeability1.53E-03
70GO:0006072: glycerol-3-phosphate metabolic process1.53E-03
71GO:0031408: oxylipin biosynthetic process1.74E-03
72GO:0010188: response to microbial phytotoxin2.06E-03
73GO:0006542: glutamine biosynthetic process2.06E-03
74GO:0070534: protein K63-linked ubiquitination2.06E-03
75GO:0010483: pollen tube reception2.06E-03
76GO:0006536: glutamate metabolic process2.06E-03
77GO:0010363: regulation of plant-type hypersensitive response2.06E-03
78GO:0009561: megagametogenesis2.25E-03
79GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.44E-03
80GO:0046907: intracellular transport2.63E-03
81GO:0007029: endoplasmic reticulum organization2.63E-03
82GO:0010225: response to UV-C2.63E-03
83GO:0030308: negative regulation of cell growth2.63E-03
84GO:0055114: oxidation-reduction process2.75E-03
85GO:0009267: cellular response to starvation3.24E-03
86GO:0010337: regulation of salicylic acid metabolic process3.24E-03
87GO:0006014: D-ribose metabolic process3.24E-03
88GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.24E-03
89GO:0006301: postreplication repair3.24E-03
90GO:0070814: hydrogen sulfide biosynthetic process3.24E-03
91GO:1902456: regulation of stomatal opening3.24E-03
92GO:1900425: negative regulation of defense response to bacterium3.24E-03
93GO:0009620: response to fungus3.33E-03
94GO:0010583: response to cyclopentenone3.74E-03
95GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.90E-03
96GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.60E-03
97GO:0071669: plant-type cell wall organization or biogenesis4.60E-03
98GO:0050829: defense response to Gram-negative bacterium4.60E-03
99GO:1902074: response to salt4.60E-03
100GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process4.60E-03
101GO:0006955: immune response4.60E-03
102GO:0046470: phosphatidylcholine metabolic process4.60E-03
103GO:1900056: negative regulation of leaf senescence4.60E-03
104GO:0070370: cellular heat acclimation4.60E-03
105GO:1900057: positive regulation of leaf senescence4.60E-03
106GO:0006468: protein phosphorylation5.25E-03
107GO:0009819: drought recovery5.35E-03
108GO:0006605: protein targeting5.35E-03
109GO:2000070: regulation of response to water deprivation5.35E-03
110GO:0009816: defense response to bacterium, incompatible interaction5.35E-03
111GO:0006526: arginine biosynthetic process6.13E-03
112GO:0043562: cellular response to nitrogen levels6.13E-03
113GO:0009808: lignin metabolic process6.13E-03
114GO:0009699: phenylpropanoid biosynthetic process6.13E-03
115GO:0010120: camalexin biosynthetic process6.13E-03
116GO:0007338: single fertilization6.95E-03
117GO:0046685: response to arsenic-containing substance6.95E-03
118GO:0090305: nucleic acid phosphodiester bond hydrolysis6.95E-03
119GO:0006098: pentose-phosphate shunt6.95E-03
120GO:0090333: regulation of stomatal closure6.95E-03
121GO:0007568: aging7.65E-03
122GO:0048268: clathrin coat assembly7.80E-03
123GO:1900426: positive regulation of defense response to bacterium7.80E-03
124GO:2000280: regulation of root development7.80E-03
125GO:0009867: jasmonic acid mediated signaling pathway8.39E-03
126GO:0045087: innate immune response8.39E-03
127GO:0006535: cysteine biosynthetic process from serine8.70E-03
128GO:0000103: sulfate assimilation8.70E-03
129GO:0007064: mitotic sister chromatid cohesion8.70E-03
130GO:0007166: cell surface receptor signaling pathway8.89E-03
131GO:0009617: response to bacterium9.39E-03
132GO:0030148: sphingolipid biosynthetic process9.63E-03
133GO:0072593: reactive oxygen species metabolic process9.63E-03
134GO:0051707: response to other organism1.08E-02
135GO:0009718: anthocyanin-containing compound biosynthetic process1.16E-02
136GO:0005975: carbohydrate metabolic process1.19E-02
137GO:0002237: response to molecule of bacterial origin1.26E-02
138GO:0009887: animal organ morphogenesis1.26E-02
139GO:0034605: cellular response to heat1.26E-02
140GO:0042538: hyperosmotic salinity response1.36E-02
141GO:0010039: response to iron ion1.37E-02
142GO:0010167: response to nitrate1.37E-02
143GO:0070588: calcium ion transmembrane transport1.37E-02
144GO:0010053: root epidermal cell differentiation1.37E-02
145GO:0007031: peroxisome organization1.37E-02
146GO:0009809: lignin biosynthetic process1.46E-02
147GO:0006813: potassium ion transport1.46E-02
148GO:0000162: tryptophan biosynthetic process1.48E-02
149GO:0051603: proteolysis involved in cellular protein catabolic process1.52E-02
150GO:0010224: response to UV-B1.52E-02
151GO:0009863: salicylic acid mediated signaling pathway1.59E-02
152GO:0005992: trehalose biosynthetic process1.59E-02
153GO:0019344: cysteine biosynthetic process1.59E-02
154GO:0009738: abscisic acid-activated signaling pathway1.63E-02
155GO:0009695: jasmonic acid biosynthetic process1.71E-02
156GO:0080167: response to karrikin1.72E-02
157GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.79E-02
158GO:0048278: vesicle docking1.82E-02
159GO:0006508: proteolysis1.82E-02
160GO:0016192: vesicle-mediated transport1.83E-02
161GO:0009626: plant-type hypersensitive response1.85E-02
162GO:0030433: ubiquitin-dependent ERAD pathway1.95E-02
163GO:0007005: mitochondrion organization1.95E-02
164GO:0010227: floral organ abscission2.07E-02
165GO:0006012: galactose metabolic process2.07E-02
166GO:0000271: polysaccharide biosynthetic process2.46E-02
167GO:0006662: glycerol ether metabolic process2.59E-02
168GO:0010154: fruit development2.59E-02
169GO:0006885: regulation of pH2.59E-02
170GO:0048544: recognition of pollen2.73E-02
171GO:0061025: membrane fusion2.73E-02
172GO:0009751: response to salicylic acid2.75E-02
173GO:0019252: starch biosynthetic process2.87E-02
174GO:0008654: phospholipid biosynthetic process2.87E-02
175GO:0009749: response to glucose2.87E-02
176GO:0016310: phosphorylation2.95E-02
177GO:0071554: cell wall organization or biogenesis3.01E-02
178GO:0002229: defense response to oomycetes3.01E-02
179GO:0007264: small GTPase mediated signal transduction3.16E-02
180GO:0016032: viral process3.16E-02
181GO:0006633: fatty acid biosynthetic process3.28E-02
182GO:1901657: glycosyl compound metabolic process3.31E-02
183GO:0030163: protein catabolic process3.31E-02
184GO:0006464: cellular protein modification process3.46E-02
185GO:0006914: autophagy3.46E-02
186GO:0009567: double fertilization forming a zygote and endosperm3.46E-02
187GO:0071805: potassium ion transmembrane transport3.61E-02
188GO:0010286: heat acclimation3.61E-02
189GO:0051607: defense response to virus3.76E-02
190GO:0001666: response to hypoxia3.92E-02
191GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.07E-02
192GO:0050832: defense response to fungus4.19E-02
193GO:0006906: vesicle fusion4.24E-02
194GO:0042128: nitrate assimilation4.24E-02
195GO:0010468: regulation of gene expression4.30E-02
196GO:0006950: response to stress4.40E-02
197GO:0009817: defense response to fungus, incompatible interaction4.73E-02
198GO:0008219: cell death4.73E-02
199GO:0030244: cellulose biosynthetic process4.73E-02
200GO:0042742: defense response to bacterium4.81E-02
201GO:0006979: response to oxidative stress4.87E-02
202GO:0009832: plant-type cell wall biogenesis4.90E-02
203GO:0010311: lateral root formation4.90E-02
204GO:0048767: root hair elongation4.90E-02
RankGO TermAdjusted P value
1GO:0102077: oleamide hydrolase activity0.00E+00
2GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives0.00E+00
3GO:0004370: glycerol kinase activity0.00E+00
4GO:0008777: acetylornithine deacetylase activity0.00E+00
5GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity0.00E+00
6GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
7GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
8GO:0004168: dolichol kinase activity0.00E+00
9GO:0080138: borate uptake transmembrane transporter activity0.00E+00
10GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
11GO:0046424: ferulate 5-hydroxylase activity0.00E+00
12GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity0.00E+00
13GO:0103073: anandamide amidohydrolase activity0.00E+00
14GO:0004383: guanylate cyclase activity1.48E-05
15GO:0004674: protein serine/threonine kinase activity5.79E-05
16GO:0004175: endopeptidase activity6.71E-05
17GO:0016301: kinase activity8.60E-05
18GO:0005496: steroid binding9.36E-05
19GO:0005524: ATP binding9.69E-05
20GO:0102391: decanoate--CoA ligase activity1.85E-04
21GO:0004467: long-chain fatty acid-CoA ligase activity2.42E-04
22GO:0015294: solute:cation symporter activity3.02E-04
23GO:0015207: adenine transmembrane transporter activity3.02E-04
24GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.02E-04
25GO:0030544: Hsp70 protein binding3.02E-04
26GO:0004825: methionine-tRNA ligase activity3.02E-04
27GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.02E-04
28GO:0015208: guanine transmembrane transporter activity3.02E-04
29GO:0008142: oxysterol binding3.75E-04
30GO:0032934: sterol binding6.60E-04
31GO:0015036: disulfide oxidoreductase activity6.60E-04
32GO:0019200: carbohydrate kinase activity6.60E-04
33GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding6.60E-04
34GO:0004142: diacylglycerol cholinephosphotransferase activity6.60E-04
35GO:0003988: acetyl-CoA C-acyltransferase activity6.60E-04
36GO:0004566: beta-glucuronidase activity6.60E-04
37GO:0015105: arsenite transmembrane transporter activity6.60E-04
38GO:0004750: ribulose-phosphate 3-epimerase activity6.60E-04
39GO:0045140: inositol phosphoceramide synthase activity6.60E-04
40GO:0004061: arylformamidase activity6.60E-04
41GO:0015035: protein disulfide oxidoreductase activity6.76E-04
42GO:0050833: pyruvate transmembrane transporter activity1.07E-03
43GO:0004781: sulfate adenylyltransferase (ATP) activity1.07E-03
44GO:0016805: dipeptidase activity1.07E-03
45GO:0016595: glutamate binding1.07E-03
46GO:0005093: Rab GDP-dissociation inhibitor activity1.07E-03
47GO:0005047: signal recognition particle binding1.07E-03
48GO:0046715: borate transmembrane transporter activity1.53E-03
49GO:0004300: enoyl-CoA hydratase activity1.53E-03
50GO:0004351: glutamate decarboxylase activity1.53E-03
51GO:0008276: protein methyltransferase activity1.53E-03
52GO:0001653: peptide receptor activity1.53E-03
53GO:0004108: citrate (Si)-synthase activity1.53E-03
54GO:0009055: electron carrier activity1.99E-03
55GO:0004834: tryptophan synthase activity2.06E-03
56GO:0015210: uracil transmembrane transporter activity2.06E-03
57GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.63E-03
58GO:0004040: amidase activity2.63E-03
59GO:0005471: ATP:ADP antiporter activity2.63E-03
60GO:0004356: glutamate-ammonia ligase activity2.63E-03
61GO:0036402: proteasome-activating ATPase activity3.24E-03
62GO:0004605: phosphatidate cytidylyltransferase activity3.24E-03
63GO:0004747: ribokinase activity3.90E-03
64GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.90E-03
65GO:0004124: cysteine synthase activity3.90E-03
66GO:0051920: peroxiredoxin activity3.90E-03
67GO:0051753: mannan synthase activity3.90E-03
68GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.99E-03
69GO:0008235: metalloexopeptidase activity4.60E-03
70GO:0102425: myricetin 3-O-glucosyltransferase activity4.60E-03
71GO:0102360: daphnetin 3-O-glucosyltransferase activity4.60E-03
72GO:0051213: dioxygenase activity5.06E-03
73GO:0004033: aldo-keto reductase (NADP) activity5.35E-03
74GO:0008865: fructokinase activity5.35E-03
75GO:0016209: antioxidant activity5.35E-03
76GO:0047893: flavonol 3-O-glucosyltransferase activity5.35E-03
77GO:0004034: aldose 1-epimerase activity5.35E-03
78GO:0030170: pyridoxal phosphate binding5.68E-03
79GO:0071949: FAD binding6.95E-03
80GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity6.95E-03
81GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors6.95E-03
82GO:0030955: potassium ion binding7.80E-03
83GO:0004743: pyruvate kinase activity7.80E-03
84GO:0004713: protein tyrosine kinase activity8.70E-03
85GO:0008171: O-methyltransferase activity8.70E-03
86GO:0005545: 1-phosphatidylinositol binding8.70E-03
87GO:0008794: arsenate reductase (glutaredoxin) activity9.63E-03
88GO:0004177: aminopeptidase activity9.63E-03
89GO:0005543: phospholipid binding9.63E-03
90GO:0005516: calmodulin binding9.86E-03
91GO:0004364: glutathione transferase activity1.04E-02
92GO:0000049: tRNA binding1.06E-02
93GO:0004521: endoribonuclease activity1.06E-02
94GO:0005388: calcium-transporting ATPase activity1.16E-02
95GO:0020037: heme binding1.28E-02
96GO:0004190: aspartic-type endopeptidase activity1.37E-02
97GO:0017025: TBP-class protein binding1.37E-02
98GO:0005509: calcium ion binding1.43E-02
99GO:0004725: protein tyrosine phosphatase activity1.48E-02
100GO:0043130: ubiquitin binding1.59E-02
101GO:0015079: potassium ion transmembrane transporter activity1.71E-02
102GO:0019706: protein-cysteine S-palmitoyltransferase activity1.82E-02
103GO:0008408: 3'-5' exonuclease activity1.82E-02
104GO:0035251: UDP-glucosyltransferase activity1.82E-02
105GO:0016760: cellulose synthase (UDP-forming) activity2.07E-02
106GO:0003727: single-stranded RNA binding2.20E-02
107GO:0047134: protein-disulfide reductase activity2.33E-02
108GO:0005451: monovalent cation:proton antiporter activity2.46E-02
109GO:0030276: clathrin binding2.59E-02
110GO:0016491: oxidoreductase activity2.62E-02
111GO:0030246: carbohydrate binding2.67E-02
112GO:0015299: solute:proton antiporter activity2.73E-02
113GO:0004791: thioredoxin-disulfide reductase activity2.73E-02
114GO:0016853: isomerase activity2.73E-02
115GO:0003924: GTPase activity2.80E-02
116GO:0004197: cysteine-type endopeptidase activity3.16E-02
117GO:0015385: sodium:proton antiporter activity3.31E-02
118GO:0016759: cellulose synthase activity3.46E-02
119GO:0008237: metallopeptidase activity3.61E-02
120GO:0016413: O-acetyltransferase activity3.76E-02
121GO:0015250: water channel activity3.92E-02
122GO:0009931: calcium-dependent protein serine/threonine kinase activity4.24E-02
123GO:0004806: triglyceride lipase activity4.40E-02
124GO:0030247: polysaccharide binding4.40E-02
125GO:0004683: calmodulin-dependent protein kinase activity4.40E-02
126GO:0102483: scopolin beta-glucosidase activity4.40E-02
127GO:0005515: protein binding4.48E-02
128GO:0008236: serine-type peptidase activity4.56E-02
129GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.56E-02
130GO:0042802: identical protein binding4.57E-02
131GO:0015238: drug transmembrane transporter activity4.90E-02
132GO:0005096: GTPase activator activity4.90E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0005886: plasma membrane4.62E-11
3GO:0005783: endoplasmic reticulum9.00E-09
4GO:0016021: integral component of membrane1.52E-06
5GO:0005829: cytosol9.99E-05
6GO:0005777: peroxisome4.66E-04
7GO:0005778: peroxisomal membrane5.46E-04
8GO:0031314: extrinsic component of mitochondrial inner membrane6.60E-04
9GO:0005773: vacuole6.95E-04
10GO:0016328: lateral plasma membrane1.07E-03
11GO:0042406: extrinsic component of endoplasmic reticulum membrane1.07E-03
12GO:0030176: integral component of endoplasmic reticulum membrane1.17E-03
13GO:0000323: lytic vacuole1.53E-03
14GO:0031372: UBC13-MMS2 complex2.06E-03
15GO:0032586: protein storage vacuole membrane2.06E-03
16GO:0031597: cytosolic proteasome complex3.90E-03
17GO:0030173: integral component of Golgi membrane3.90E-03
18GO:0031595: nuclear proteasome complex4.60E-03
19GO:0031305: integral component of mitochondrial inner membrane5.35E-03
20GO:0005786: signal recognition particle, endoplasmic reticulum targeting6.13E-03
21GO:0000326: protein storage vacuole6.13E-03
22GO:0009514: glyoxysome6.13E-03
23GO:0005779: integral component of peroxisomal membrane6.13E-03
24GO:0008540: proteasome regulatory particle, base subcomplex7.80E-03
25GO:0005765: lysosomal membrane9.63E-03
26GO:0005789: endoplasmic reticulum membrane1.20E-02
27GO:0000502: proteasome complex1.46E-02
28GO:0005741: mitochondrial outer membrane1.82E-02
29GO:0005905: clathrin-coated pit1.82E-02
30GO:0030136: clathrin-coated vesicle2.33E-02
31GO:0005743: mitochondrial inner membrane2.56E-02
32GO:0005770: late endosome2.59E-02
33GO:0071944: cell periphery3.31E-02
34GO:0005737: cytoplasm3.38E-02
35GO:0016020: membrane3.87E-02
Gene type



Gene DE type