GO Enrichment Analysis of Co-expressed Genes with
AT3G46290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 3 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 5 | GO:0007172: signal complex assembly | 0.00E+00 |
| 6 | GO:0009640: photomorphogenesis | 7.22E-06 |
| 7 | GO:0010480: microsporocyte differentiation | 1.77E-05 |
| 8 | GO:0009934: regulation of meristem structural organization | 1.83E-05 |
| 9 | GO:0010071: root meristem specification | 1.23E-04 |
| 10 | GO:0007276: gamete generation | 1.23E-04 |
| 11 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 1.23E-04 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 1.44E-04 |
| 13 | GO:0009637: response to blue light | 2.06E-04 |
| 14 | GO:0010114: response to red light | 2.68E-04 |
| 15 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.72E-04 |
| 16 | GO:0009643: photosynthetic acclimation | 2.72E-04 |
| 17 | GO:0010315: auxin efflux | 2.72E-04 |
| 18 | GO:0051510: regulation of unidimensional cell growth | 3.84E-04 |
| 19 | GO:0080186: developmental vegetative growth | 3.84E-04 |
| 20 | GO:0048437: floral organ development | 3.84E-04 |
| 21 | GO:0050821: protein stabilization | 4.43E-04 |
| 22 | GO:0040029: regulation of gene expression, epigenetic | 4.43E-04 |
| 23 | GO:0034968: histone lysine methylation | 4.43E-04 |
| 24 | GO:0009657: plastid organization | 5.05E-04 |
| 25 | GO:0048507: meristem development | 5.68E-04 |
| 26 | GO:0007346: regulation of mitotic cell cycle | 6.32E-04 |
| 27 | GO:0048829: root cap development | 6.99E-04 |
| 28 | GO:0045036: protein targeting to chloroplast | 6.99E-04 |
| 29 | GO:0048229: gametophyte development | 7.68E-04 |
| 30 | GO:0008361: regulation of cell size | 8.38E-04 |
| 31 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.38E-04 |
| 32 | GO:0010075: regulation of meristem growth | 9.08E-04 |
| 33 | GO:0009887: animal organ morphogenesis | 9.82E-04 |
| 34 | GO:0051017: actin filament bundle assembly | 1.21E-03 |
| 35 | GO:0006289: nucleotide-excision repair | 1.21E-03 |
| 36 | GO:0030154: cell differentiation | 1.28E-03 |
| 37 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.29E-03 |
| 38 | GO:0051302: regulation of cell division | 1.29E-03 |
| 39 | GO:0048443: stamen development | 1.63E-03 |
| 40 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.65E-03 |
| 41 | GO:0048653: anther development | 1.81E-03 |
| 42 | GO:0015979: photosynthesis | 1.82E-03 |
| 43 | GO:0009958: positive gravitropism | 1.90E-03 |
| 44 | GO:0010305: leaf vascular tissue pattern formation | 1.90E-03 |
| 45 | GO:0007018: microtubule-based movement | 2.00E-03 |
| 46 | GO:0008654: phospholipid biosynthetic process | 2.09E-03 |
| 47 | GO:0009556: microsporogenesis | 2.09E-03 |
| 48 | GO:0048364: root development | 2.44E-03 |
| 49 | GO:0009639: response to red or far red light | 2.49E-03 |
| 50 | GO:0006468: protein phosphorylation | 3.35E-03 |
| 51 | GO:0018298: protein-chromophore linkage | 3.36E-03 |
| 52 | GO:0010218: response to far red light | 3.59E-03 |
| 53 | GO:0007568: aging | 3.70E-03 |
| 54 | GO:0009910: negative regulation of flower development | 3.70E-03 |
| 55 | GO:0009926: auxin polar transport | 4.68E-03 |
| 56 | GO:0006813: potassium ion transport | 5.75E-03 |
| 57 | GO:0009909: regulation of flower development | 6.17E-03 |
| 58 | GO:0006417: regulation of translation | 6.17E-03 |
| 59 | GO:0009624: response to nematode | 7.34E-03 |
| 60 | GO:0006396: RNA processing | 7.49E-03 |
| 61 | GO:0009733: response to auxin | 9.32E-03 |
| 62 | GO:0009790: embryo development | 9.56E-03 |
| 63 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.11E-02 |
| 64 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.16E-02 |
| 65 | GO:0007166: cell surface receptor signaling pathway | 1.18E-02 |
| 66 | GO:0009658: chloroplast organization | 1.46E-02 |
| 67 | GO:0009723: response to ethylene | 1.62E-02 |
| 68 | GO:0046777: protein autophosphorylation | 1.79E-02 |
| 69 | GO:0032259: methylation | 2.18E-02 |
| 70 | GO:0006629: lipid metabolic process | 2.25E-02 |
| 71 | GO:0006397: mRNA processing | 2.32E-02 |
| 72 | GO:0055114: oxidation-reduction process | 2.66E-02 |
| 73 | GO:0009873: ethylene-activated signaling pathway | 2.70E-02 |
| 74 | GO:0009734: auxin-activated signaling pathway | 2.87E-02 |
| 75 | GO:0009908: flower development | 3.15E-02 |
| 76 | GO:0009416: response to light stimulus | 3.39E-02 |
| 77 | GO:0051301: cell division | 3.60E-02 |
| 78 | GO:0055085: transmembrane transport | 4.01E-02 |
| 79 | GO:0006355: regulation of transcription, DNA-templated | 4.35E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 2 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.77E-05 |
| 3 | GO:0033612: receptor serine/threonine kinase binding | 3.48E-05 |
| 4 | GO:0016805: dipeptidase activity | 8.18E-05 |
| 5 | GO:0004180: carboxypeptidase activity | 8.18E-05 |
| 6 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 8.18E-05 |
| 7 | GO:0022890: inorganic cation transmembrane transporter activity | 1.23E-04 |
| 8 | GO:0042054: histone methyltransferase activity | 1.23E-04 |
| 9 | GO:0070628: proteasome binding | 1.69E-04 |
| 10 | GO:0010328: auxin influx transmembrane transporter activity | 1.69E-04 |
| 11 | GO:0031593: polyubiquitin binding | 2.72E-04 |
| 12 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.72E-04 |
| 13 | GO:0043621: protein self-association | 2.90E-04 |
| 14 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 6.49E-04 |
| 15 | GO:0015386: potassium:proton antiporter activity | 7.68E-04 |
| 16 | GO:0008017: microtubule binding | 8.98E-04 |
| 17 | GO:0010329: auxin efflux transmembrane transporter activity | 9.08E-04 |
| 18 | GO:0031409: pigment binding | 1.13E-03 |
| 19 | GO:0043130: ubiquitin binding | 1.21E-03 |
| 20 | GO:0015079: potassium ion transmembrane transporter activity | 1.29E-03 |
| 21 | GO:0003727: single-stranded RNA binding | 1.63E-03 |
| 22 | GO:0018024: histone-lysine N-methyltransferase activity | 1.72E-03 |
| 23 | GO:0015299: solute:proton antiporter activity | 2.00E-03 |
| 24 | GO:0019901: protein kinase binding | 2.09E-03 |
| 25 | GO:0048038: quinone binding | 2.19E-03 |
| 26 | GO:0051015: actin filament binding | 2.39E-03 |
| 27 | GO:0003684: damaged DNA binding | 2.49E-03 |
| 28 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 2.60E-03 |
| 29 | GO:0016168: chlorophyll binding | 2.91E-03 |
| 30 | GO:0004721: phosphoprotein phosphatase activity | 3.13E-03 |
| 31 | GO:0042393: histone binding | 4.31E-03 |
| 32 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.94E-03 |
| 33 | GO:0005524: ATP binding | 4.96E-03 |
| 34 | GO:0016298: lipase activity | 5.89E-03 |
| 35 | GO:0003777: microtubule motor activity | 6.17E-03 |
| 36 | GO:0003779: actin binding | 7.19E-03 |
| 37 | GO:0005506: iron ion binding | 8.17E-03 |
| 38 | GO:0004674: protein serine/threonine kinase activity | 8.61E-03 |
| 39 | GO:0005515: protein binding | 9.27E-03 |
| 40 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.02E-02 |
| 41 | GO:0004672: protein kinase activity | 1.22E-02 |
| 42 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.27E-02 |
| 43 | GO:0008168: methyltransferase activity | 1.42E-02 |
| 44 | GO:0004497: monooxygenase activity | 1.70E-02 |
| 45 | GO:0016787: hydrolase activity | 1.79E-02 |
| 46 | GO:0004871: signal transducer activity | 2.00E-02 |
| 47 | GO:0008289: lipid binding | 2.85E-02 |
| 48 | GO:0016887: ATPase activity | 3.07E-02 |
| 49 | GO:0019825: oxygen binding | 4.36E-02 |
| 50 | GO:0005516: calmodulin binding | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 6.30E-05 |
| 2 | GO:0005819: spindle | 2.26E-04 |
| 3 | GO:0009941: chloroplast envelope | 2.85E-04 |
| 4 | GO:0009706: chloroplast inner membrane | 5.10E-04 |
| 5 | GO:0005680: anaphase-promoting complex | 5.68E-04 |
| 6 | GO:0010287: plastoglobule | 6.01E-04 |
| 7 | GO:0009534: chloroplast thylakoid | 6.12E-04 |
| 8 | GO:0009574: preprophase band | 9.08E-04 |
| 9 | GO:0030076: light-harvesting complex | 1.06E-03 |
| 10 | GO:0042651: thylakoid membrane | 1.29E-03 |
| 11 | GO:0000775: chromosome, centromeric region | 1.46E-03 |
| 12 | GO:0031969: chloroplast membrane | 1.60E-03 |
| 13 | GO:0005871: kinesin complex | 1.72E-03 |
| 14 | GO:0009522: photosystem I | 2.00E-03 |
| 15 | GO:0009523: photosystem II | 2.09E-03 |
| 16 | GO:0009504: cell plate | 2.09E-03 |
| 17 | GO:0000325: plant-type vacuole | 3.70E-03 |
| 18 | GO:0005886: plasma membrane | 3.96E-03 |
| 19 | GO:0009507: chloroplast | 6.86E-03 |
| 20 | GO:0016021: integral component of membrane | 7.26E-03 |
| 21 | GO:0005623: cell | 8.74E-03 |
| 22 | GO:0009524: phragmoplast | 8.90E-03 |
| 23 | GO:0005789: endoplasmic reticulum membrane | 1.27E-02 |
| 24 | GO:0046658: anchored component of plasma membrane | 1.31E-02 |
| 25 | GO:0005874: microtubule | 1.66E-02 |
| 26 | GO:0009579: thylakoid | 3.85E-02 |
| 27 | GO:0031225: anchored component of membrane | 4.65E-02 |