Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G46100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006642: triglyceride mobilization0.00E+00
2GO:0006094: gluconeogenesis1.86E-05
3GO:0046166: glyceraldehyde-3-phosphate biosynthetic process1.97E-05
4GO:0019563: glycerol catabolic process9.05E-05
5GO:0032504: multicellular organism reproduction9.05E-05
6GO:0015979: photosynthesis1.94E-04
7GO:0010190: cytochrome b6f complex assembly2.97E-04
8GO:0042372: phylloquinone biosynthetic process3.57E-04
9GO:0006096: glycolytic process4.86E-04
10GO:0009657: plastid organization5.50E-04
11GO:0009051: pentose-phosphate shunt, oxidative branch6.19E-04
12GO:0006098: pentose-phosphate shunt6.19E-04
13GO:0048829: root cap development7.62E-04
14GO:0009073: aromatic amino acid family biosynthetic process8.37E-04
15GO:0006006: glucose metabolic process9.90E-04
16GO:0019253: reductive pentose-phosphate cycle1.07E-03
17GO:0008380: RNA splicing1.15E-03
18GO:0009658: chloroplast organization1.48E-03
19GO:0003333: amino acid transmembrane transport1.50E-03
20GO:0080022: primary root development1.98E-03
21GO:0006397: mRNA processing2.78E-03
22GO:0001666: response to hypoxia3.07E-03
23GO:0010027: thylakoid membrane organization3.07E-03
24GO:0016311: dephosphorylation3.55E-03
25GO:0006865: amino acid transport4.19E-03
26GO:0006855: drug transmembrane transport5.71E-03
27GO:0051603: proteolysis involved in cellular protein catabolic process6.46E-03
28GO:0006413: translational initiation1.12E-02
29GO:0009451: RNA modification1.20E-02
30GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.52E-02
31GO:0006508: proteolysis2.94E-02
32GO:0009734: auxin-activated signaling pathway3.16E-02
33GO:0006412: translation4.95E-02
RankGO TermAdjusted P value
1GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
2GO:0004045: aminoacyl-tRNA hydrolase activity5.76E-07
3GO:0004807: triose-phosphate isomerase activity1.97E-05
4GO:0005528: FK506 binding3.24E-05
5GO:0001872: (1->3)-beta-D-glucan binding1.36E-04
6GO:0004345: glucose-6-phosphate dehydrogenase activity1.86E-04
7GO:0010328: auxin influx transmembrane transporter activity1.86E-04
8GO:0016208: AMP binding2.97E-04
9GO:0004332: fructose-bisphosphate aldolase activity2.97E-04
10GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.58E-04
11GO:0009055: electron carrier activity2.86E-03
12GO:0030247: polysaccharide binding3.43E-03
13GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding3.55E-03
14GO:0015238: drug transmembrane transporter activity3.80E-03
15GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.06E-03
16GO:0000987: core promoter proximal region sequence-specific DNA binding4.45E-03
17GO:0003993: acid phosphatase activity4.45E-03
18GO:0050661: NADP binding4.72E-03
19GO:0004185: serine-type carboxypeptidase activity5.13E-03
20GO:0015293: symporter activity5.56E-03
21GO:0015171: amino acid transmembrane transporter activity6.76E-03
22GO:0005509: calcium ion binding8.76E-03
23GO:0005215: transporter activity1.05E-02
24GO:0015297: antiporter activity1.14E-02
25GO:0003743: translation initiation factor activity1.32E-02
26GO:0016788: hydrolase activity, acting on ester bonds1.63E-02
27GO:0050660: flavin adenine dinucleotide binding1.78E-02
28GO:0003723: RNA binding1.84E-02
29GO:0004722: protein serine/threonine phosphatase activity2.28E-02
30GO:0003924: GTPase activity2.47E-02
31GO:0004519: endonuclease activity2.63E-02
32GO:0016887: ATPase activity3.38E-02
33GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.54E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.58E-11
2GO:0009543: chloroplast thylakoid lumen1.30E-08
3GO:0031977: thylakoid lumen1.01E-07
4GO:0009654: photosystem II oxygen evolving complex3.65E-05
5GO:0009579: thylakoid7.01E-05
6GO:0009535: chloroplast thylakoid membrane8.55E-05
7GO:0019898: extrinsic component of membrane8.58E-05
8GO:0009570: chloroplast stroma1.16E-04
9GO:0030529: intracellular ribonucleoprotein complex1.39E-04
10GO:0031969: chloroplast membrane1.82E-03
11GO:0005778: peroxisomal membrane2.84E-03
12GO:0009941: chloroplast envelope9.67E-03
13GO:0046658: anchored component of plasma membrane1.44E-02
14GO:0043231: intracellular membrane-bounded organelle2.65E-02
15GO:0048046: apoplast3.47E-02
16GO:0005777: peroxisome4.11E-02
17GO:0009534: chloroplast thylakoid4.26E-02
Gene type



Gene DE type