co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G45970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006792: regulation of sulfur utilization	0.00E+00
2	GO:1901485: positive regulation of transcription factor catabolic process	0.00E+00
3	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
4	GO:0080127: fruit septum development	0.00E+00
5	GO:0010411: xyloglucan metabolic process	1.49E-08
6	GO:0010200: response to chitin	1.54E-07
7	GO:0042546: cell wall biogenesis	3.37E-06
8	GO:0010438: cellular response to sulfur starvation	3.89E-05
9	GO:0009751: response to salicylic acid	7.03E-05
10	GO:0009741: response to brassinosteroid	1.03E-04
11	GO:0033481: galacturonate biosynthetic process	1.77E-04
12	GO:0019354: siroheme biosynthetic process	1.77E-04
13	GO:0009962: regulation of flavonoid biosynthetic process	1.77E-04
14	GO:2000029: regulation of proanthocyanidin biosynthetic process	1.77E-04
15	GO:0050691: regulation of defense response to virus by host	1.77E-04
16	GO:0030154: cell differentiation	3.54E-04
17	GO:0031542: positive regulation of anthocyanin biosynthetic process	4.01E-04
18	GO:0071497: cellular response to freezing	4.01E-04
19	GO:0040008: regulation of growth	4.32E-04
20	GO:0009718: anthocyanin-containing compound biosynthetic process	4.47E-04
21	GO:0019419: sulfate reduction	6.55E-04
22	GO:0010581: regulation of starch biosynthetic process	6.55E-04
23	GO:0080168: abscisic acid transport	6.55E-04
24	GO:0005992: trehalose biosynthetic process	6.94E-04
25	GO:0006357: regulation of transcription from RNA polymerase II promoter	7.54E-04
26	GO:0031347: regulation of defense response	8.04E-04
27	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.13E-04
28	GO:1902358: sulfate transmembrane transport	9.34E-04
29	GO:0019722: calcium-mediated signaling	1.07E-03
30	GO:0071555: cell wall organization	1.15E-03
31	GO:0046345: abscisic acid catabolic process	1.24E-03
32	GO:0000271: polysaccharide biosynthetic process	1.25E-03
33	GO:0016131: brassinosteroid metabolic process	1.57E-03
34	GO:2000762: regulation of phenylpropanoid metabolic process	1.57E-03
35	GO:0010583: response to cyclopentenone	1.76E-03
36	GO:0060918: auxin transport	1.94E-03
37	GO:1900425: negative regulation of defense response to bacterium	1.94E-03
38	GO:0003006: developmental process involved in reproduction	1.94E-03
39	GO:0007267: cell-cell signaling	2.12E-03
40	GO:0009753: response to jasmonic acid	2.50E-03
41	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.51E-03
42	GO:0051510: regulation of unidimensional cell growth	2.74E-03
43	GO:0050829: defense response to Gram-negative bacterium	2.74E-03
44	GO:2000070: regulation of response to water deprivation	3.17E-03
45	GO:0035265: organ growth	3.17E-03
46	GO:0030162: regulation of proteolysis	3.17E-03
47	GO:0070413: trehalose metabolism in response to stress	3.17E-03
48	GO:0010439: regulation of glucosinolate biosynthetic process	3.17E-03
49	GO:0006355: regulation of transcription, DNA-templated	3.26E-03
50	GO:0016567: protein ubiquitination	3.42E-03
51	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.63E-03
52	GO:0010099: regulation of photomorphogenesis	3.63E-03
53	GO:0048507: meristem development	4.10E-03
54	GO:0051865: protein autoubiquitination	4.10E-03
55	GO:0009638: phototropism	4.60E-03
56	GO:0006779: porphyrin-containing compound biosynthetic process	4.60E-03
57	GO:0009826: unidimensional cell growth	4.70E-03
58	GO:0043069: negative regulation of programmed cell death	5.11E-03
59	GO:0000103: sulfate assimilation	5.11E-03
60	GO:0009733: response to auxin	5.29E-03
61	GO:0000272: polysaccharide catabolic process	5.65E-03
62	GO:0010015: root morphogenesis	5.65E-03
63	GO:0000038: very long-chain fatty acid metabolic process	5.65E-03
64	GO:2000652: regulation of secondary cell wall biogenesis	5.65E-03
65	GO:1903507: negative regulation of nucleic acid-templated transcription	5.65E-03
66	GO:0009723: response to ethylene	5.94E-03
67	GO:0016024: CDP-diacylglycerol biosynthetic process	6.20E-03
68	GO:0010582: floral meristem determinacy	6.20E-03
69	GO:0018107: peptidyl-threonine phosphorylation	6.78E-03
70	GO:0009585: red, far-red light phototransduction	6.78E-03
71	GO:0046777: protein autophosphorylation	7.06E-03
72	GO:0010540: basipetal auxin transport	7.37E-03
73	GO:0048467: gynoecium development	7.37E-03
74	GO:0034605: cellular response to heat	7.37E-03
75	GO:0010143: cutin biosynthetic process	7.37E-03
76	GO:0002237: response to molecule of bacterial origin	7.37E-03
77	GO:0009969: xyloglucan biosynthetic process	7.98E-03
78	GO:0009225: nucleotide-sugar metabolic process	7.98E-03
79	GO:0045454: cell redox homeostasis	8.16E-03
80	GO:0006487: protein N-linked glycosylation	9.26E-03
81	GO:0019344: cysteine biosynthetic process	9.26E-03
82	GO:0019953: sexual reproduction	9.92E-03
83	GO:0010026: trichome differentiation	9.92E-03
84	GO:0009742: brassinosteroid mediated signaling pathway	1.02E-02
85	GO:0016998: cell wall macromolecule catabolic process	1.06E-02
86	GO:0010017: red or far-red light signaling pathway	1.13E-02
87	GO:0040007: growth	1.20E-02
88	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.20E-02
89	GO:0009306: protein secretion	1.27E-02
90	GO:0010214: seed coat development	1.27E-02
91	GO:0010087: phloem or xylem histogenesis	1.43E-02
92	GO:0048653: anther development	1.43E-02
93	GO:0009873: ethylene-activated signaling pathway	1.47E-02
94	GO:0010268: brassinosteroid homeostasis	1.50E-02
95	GO:0045489: pectin biosynthetic process	1.50E-02
96	GO:0009958: positive gravitropism	1.50E-02
97	GO:0009791: post-embryonic development	1.66E-02
98	GO:0016132: brassinosteroid biosynthetic process	1.75E-02
99	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.75E-02
100	GO:0002229: defense response to oomycetes	1.75E-02
101	GO:0009739: response to gibberellin	1.88E-02
102	GO:0009828: plant-type cell wall loosening	2.00E-02
103	GO:0016125: sterol metabolic process	2.00E-02
104	GO:0019760: glucosinolate metabolic process	2.00E-02
105	GO:0009639: response to red or far red light	2.00E-02
106	GO:0006351: transcription, DNA-templated	2.05E-02
107	GO:0006904: vesicle docking involved in exocytosis	2.09E-02
108	GO:0009738: abscisic acid-activated signaling pathway	2.11E-02
109	GO:0001666: response to hypoxia	2.27E-02
110	GO:0048573: photoperiodism, flowering	2.55E-02
111	GO:0016311: dephosphorylation	2.64E-02
112	GO:0016049: cell growth	2.64E-02
113	GO:0009860: pollen tube growth	2.80E-02
114	GO:0048767: root hair elongation	2.84E-02
115	GO:0009813: flavonoid biosynthetic process	2.84E-02
116	GO:0010218: response to far red light	2.94E-02
117	GO:0048527: lateral root development	3.04E-02
118	GO:0016051: carbohydrate biosynthetic process	3.24E-02
119	GO:0009637: response to blue light	3.24E-02
120	GO:0009867: jasmonic acid mediated signaling pathway	3.24E-02
121	GO:0042542: response to hydrogen peroxide	3.78E-02
122	GO:0010114: response to red light	3.88E-02
123	GO:0006855: drug transmembrane transport	4.33E-02
124	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.45E-02
125	GO:0009664: plant-type cell wall organization	4.56E-02
126	GO:0009737: response to abscisic acid	4.73E-02
127	GO:0006629: lipid metabolic process	4.73E-02
128	GO:0006486: protein glycosylation	4.80E-02
129	GO:0051603: proteolysis involved in cellular protein catabolic process	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0090411: brassinosteroid binding	0.00E+00
2	GO:0047890: flavanone 4-reductase activity	0.00E+00
3	GO:0004851: uroporphyrin-III C-methyltransferase activity	0.00E+00
4	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
5	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.40E-07
6	GO:0016798: hydrolase activity, acting on glycosyl bonds	6.18E-07
7	GO:0080132: fatty acid alpha-hydroxylase activity	1.77E-04
8	GO:0090440: abscisic acid transporter activity	1.77E-04
9	GO:0044212: transcription regulatory region DNA binding	2.90E-04
10	GO:0004805: trehalose-phosphatase activity	2.95E-04
11	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.11E-04
12	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.80E-04
13	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	4.01E-04
14	GO:0050736: O-malonyltransferase activity	4.01E-04
15	GO:0009973: adenylyl-sulfate reductase activity	4.01E-04
16	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	4.01E-04
17	GO:0043565: sequence-specific DNA binding	4.56E-04
18	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	6.55E-04
19	GO:0033843: xyloglucan 6-xylosyltransferase activity	9.34E-04
20	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	9.34E-04
21	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.13E-03
22	GO:0050378: UDP-glucuronate 4-epimerase activity	1.24E-03
23	GO:0002020: protease binding	1.57E-03
24	GO:0035252: UDP-xylosyltransferase activity	1.94E-03
25	GO:0010427: abscisic acid binding	1.94E-03
26	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.94E-03
27	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.94E-03
28	GO:0016791: phosphatase activity	2.00E-03
29	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.04E-03
30	GO:0004842: ubiquitin-protein transferase activity	2.18E-03
31	GO:0016161: beta-amylase activity	2.32E-03
32	GO:0008271: secondary active sulfate transmembrane transporter activity	3.63E-03
33	GO:0004864: protein phosphatase inhibitor activity	5.11E-03
34	GO:0015116: sulfate transmembrane transporter activity	6.20E-03
35	GO:0000976: transcription regulatory region sequence-specific DNA binding	6.20E-03
36	GO:0046983: protein dimerization activity	7.16E-03
37	GO:0031625: ubiquitin protein ligase binding	7.51E-03
38	GO:0003712: transcription cofactor activity	7.98E-03
39	GO:0003677: DNA binding	8.43E-03
40	GO:0003714: transcription corepressor activity	9.26E-03
41	GO:0008134: transcription factor binding	9.26E-03
42	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.13E-02
43	GO:0016758: transferase activity, transferring hexosyl groups	1.18E-02
44	GO:0016757: transferase activity, transferring glycosyl groups	1.27E-02
45	GO:0004402: histone acetyltransferase activity	1.43E-02
46	GO:0001085: RNA polymerase II transcription factor binding	1.50E-02
47	GO:0005506: iron ion binding	1.52E-02
48	GO:0050662: coenzyme binding	1.58E-02
49	GO:0004872: receptor activity	1.66E-02
50	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.91E-02
51	GO:0016759: cellulose synthase activity	2.00E-02
52	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.09E-02
53	GO:0008375: acetylglucosaminyltransferase activity	2.45E-02
54	GO:0004806: triglyceride lipase activity	2.55E-02
55	GO:0004674: protein serine/threonine kinase activity	2.56E-02
56	GO:0004672: protein kinase activity	2.76E-02
57	GO:0015238: drug transmembrane transporter activity	2.84E-02
58	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.04E-02
59	GO:0020037: heme binding	3.07E-02
60	GO:0019825: oxygen binding	3.42E-02
61	GO:0004185: serine-type carboxypeptidase activity	3.88E-02
62	GO:0004871: signal transducer activity	4.03E-02
63	GO:0043621: protein self-association	4.11E-02
64	GO:0015293: symporter activity	4.22E-02
65	GO:0016298: lipase activity	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0090568: nuclear transcriptional repressor complex	0.00E+00
2	GO:0048046: apoplast	1.60E-04
3	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.55E-04
4	GO:0031225: anchored component of membrane	2.74E-03
5	GO:0005615: extracellular space	3.27E-03
6	GO:0005794: Golgi apparatus	1.40E-02
7	GO:0005770: late endosome	1.50E-02
8	GO:0005618: cell wall	1.70E-02
9	GO:0032580: Golgi cisterna membrane	2.00E-02
10	GO:0009505: plant-type cell wall	2.19E-02
11	GO:0046658: anchored component of plasma membrane	2.22E-02
12	GO:0005667: transcription factor complex	2.45E-02
13	GO:0000139: Golgi membrane	2.45E-02
14	GO:0019005: SCF ubiquitin ligase complex	2.74E-02
15	GO:0031902: late endosome membrane	3.67E-02