co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G45930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080094: response to trehalose-6-phosphate	0.00E+00
2	GO:0051290: protein heterotetramerization	0.00E+00
3	GO:1901671: positive regulation of superoxide dismutase activity	0.00E+00
4	GO:0016048: detection of temperature stimulus	0.00E+00
5	GO:0006342: chromatin silencing	1.64E-06
6	GO:0042793: transcription from plastid promoter	2.51E-06
7	GO:0042026: protein refolding	3.68E-06
8	GO:0006458: 'de novo' protein folding	3.68E-06
9	GO:0000105: histidine biosynthetic process	6.88E-06
10	GO:0044030: regulation of DNA methylation	8.96E-06
11	GO:0006169: adenosine salvage	2.64E-05
12	GO:0061077: chaperone-mediated protein folding	6.21E-05
13	GO:0009662: etioplast organization	6.72E-05
14	GO:0007005: mitochondrion organization	6.90E-05
15	GO:0042276: error-prone translesion synthesis	1.18E-04
16	GO:0070828: heterochromatin organization	1.18E-04
17	GO:0006275: regulation of DNA replication	1.18E-04
18	GO:0010468: regulation of gene expression	1.38E-04
19	GO:0006986: response to unfolded protein	1.76E-04
20	GO:0051085: chaperone mediated protein folding requiring cofactor	1.76E-04
21	GO:0009658: chloroplast organization	1.99E-04
22	GO:0044209: AMP salvage	3.07E-04
23	GO:0000741: karyogamy	3.78E-04
24	GO:0006796: phosphate-containing compound metabolic process	3.78E-04
25	GO:0009642: response to light intensity	6.10E-04
26	GO:0052543: callose deposition in cell wall	6.10E-04
27	GO:0046686: response to cadmium ion	6.47E-04
28	GO:0006002: fructose 6-phosphate metabolic process	6.94E-04
29	GO:0051555: flavonol biosynthetic process	9.59E-04
30	GO:0006541: glutamine metabolic process	1.35E-03
31	GO:0006334: nucleosome assembly	1.90E-03
32	GO:0009411: response to UV	2.14E-03
33	GO:0010197: polar nucleus fusion	2.65E-03
34	GO:0007059: chromosome segregation	2.78E-03
35	GO:0016032: viral process	3.19E-03
36	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.06E-03
37	GO:0006260: DNA replication	7.50E-03
38	GO:0009909: regulation of flower development	8.68E-03
39	GO:0006096: glycolytic process	9.08E-03
40	GO:0016569: covalent chromatin modification	9.92E-03
41	GO:0006414: translational elongation	1.01E-02
42	GO:0009058: biosynthetic process	1.26E-02
43	GO:0009790: embryo development	1.35E-02
44	GO:0042742: defense response to bacterium	1.37E-02
45	GO:0006970: response to osmotic stress	2.19E-02
46	GO:0080167: response to karrikin	2.42E-02
47	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.48E-02
48	GO:0015979: photosynthesis	2.66E-02
49	GO:0045892: negative regulation of transcription, DNA-templated	2.78E-02
50	GO:0009908: flower development	4.47E-02
51	GO:0009735: response to cytokinin	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0004635: phosphoribosyl-AMP cyclohydrolase activity	0.00E+00
2	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
3	GO:0016833: oxo-acid-lyase activity	0.00E+00
4	GO:0004636: phosphoribosyl-ATP diphosphatase activity	0.00E+00
5	GO:0000107: imidazoleglycerol-phosphate synthase activity	0.00E+00
6	GO:0046982: protein heterodimerization activity	2.69E-07
7	GO:0003677: DNA binding	2.79E-07
8	GO:0044183: protein binding involved in protein folding	2.07E-05
9	GO:0030337: DNA polymerase processivity factor activity	2.64E-05
10	GO:0004001: adenosine kinase activity	2.64E-05
11	GO:0051082: unfolded protein binding	4.73E-05
12	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	1.18E-04
13	GO:0001872: (1->3)-beta-D-glucan binding	1.76E-04
14	GO:0016773: phosphotransferase activity, alcohol group as acceptor	3.07E-04
15	GO:0004784: superoxide dismutase activity	3.78E-04
16	GO:0016462: pyrophosphatase activity	3.78E-04
17	GO:0004427: inorganic diphosphatase activity	5.30E-04
18	GO:0003872: 6-phosphofructokinase activity	5.30E-04
19	GO:0005507: copper ion binding	1.39E-03
20	GO:0051087: chaperone binding	1.78E-03
21	GO:0008483: transaminase activity	3.62E-03
22	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.62E-03
23	GO:0005515: protein binding	4.08E-03
24	GO:0030247: polysaccharide binding	4.37E-03
25	GO:0042393: histone binding	6.04E-03
26	GO:0080043: quercetin 3-O-glucosyltransferase activity	9.71E-03
27	GO:0080044: quercetin 7-O-glucosyltransferase activity	9.71E-03
28	GO:0030170: pyridoxal phosphate binding	1.30E-02
29	GO:0005524: ATP binding	1.55E-02
30	GO:0008017: microtubule binding	1.57E-02
31	GO:0008194: UDP-glycosyltransferase activity	1.65E-02
32	GO:0000287: magnesium ion binding	2.05E-02
33	GO:0003682: chromatin binding	2.16E-02
34	GO:0003735: structural constituent of ribosome	2.73E-02
35	GO:0016757: transferase activity, transferring glycosyl groups	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0000940: condensed chromosome outer kinetochore	0.00E+00
2	GO:0000788: nuclear nucleosome	0.00E+00
3	GO:0005721: pericentric heterochromatin	0.00E+00
4	GO:0000786: nucleosome	1.04E-11
5	GO:0042644: chloroplast nucleoid	1.19E-10
6	GO:0000790: nuclear chromatin	1.24E-06
7	GO:0009295: nucleoid	3.75E-06
8	GO:0009579: thylakoid	9.51E-06
9	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	2.64E-05
10	GO:0000792: heterochromatin	6.72E-05
11	GO:0000427: plastid-encoded plastid RNA polymerase complex	6.72E-05
12	GO:0022626: cytosolic ribosome	9.16E-05
13	GO:0005730: nucleolus	1.05E-04
14	GO:0042646: plastid nucleoid	1.76E-04
15	GO:0009570: chloroplast stroma	2.75E-04
16	GO:0009536: plastid	4.50E-04
17	GO:0009941: chloroplast envelope	7.26E-04
18	GO:0005876: spindle microtubule	8.68E-04
19	GO:0009507: chloroplast	2.28E-03
20	GO:0048046: apoplast	2.31E-03
21	GO:0009506: plasmodesma	4.41E-03
22	GO:0005634: nucleus	1.39E-02
23	GO:0005759: mitochondrial matrix	1.42E-02
24	GO:0005840: ribosome	1.43E-02
25	GO:0009505: plant-type cell wall	1.72E-02
26	GO:0046658: anchored component of plasma membrane	1.86E-02
27	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.22E-02
28	GO:0043231: intracellular membrane-bounded organelle	3.42E-02