GO Enrichment Analysis of Co-expressed Genes with
AT3G45850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045176: apical protein localization | 0.00E+00 |
| 2 | GO:0042493: response to drug | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 5 | GO:0006412: translation | 9.50E-10 |
| 6 | GO:0042254: ribosome biogenesis | 9.62E-09 |
| 7 | GO:0000413: protein peptidyl-prolyl isomerization | 4.58E-05 |
| 8 | GO:0042372: phylloquinone biosynthetic process | 4.74E-05 |
| 9 | GO:0009735: response to cytokinin | 7.64E-05 |
| 10 | GO:0032544: plastid translation | 1.04E-04 |
| 11 | GO:0042759: long-chain fatty acid biosynthetic process | 1.27E-04 |
| 12 | GO:0042371: vitamin K biosynthetic process | 1.27E-04 |
| 13 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.27E-04 |
| 14 | GO:0060627: regulation of vesicle-mediated transport | 1.27E-04 |
| 15 | GO:0006013: mannose metabolic process | 4.86E-04 |
| 16 | GO:0010088: phloem development | 6.95E-04 |
| 17 | GO:0009650: UV protection | 6.95E-04 |
| 18 | GO:0051639: actin filament network formation | 6.95E-04 |
| 19 | GO:0051764: actin crosslink formation | 9.21E-04 |
| 20 | GO:0010236: plastoquinone biosynthetic process | 1.16E-03 |
| 21 | GO:0032973: amino acid export | 1.43E-03 |
| 22 | GO:0006014: D-ribose metabolic process | 1.43E-03 |
| 23 | GO:0048827: phyllome development | 1.43E-03 |
| 24 | GO:0042549: photosystem II stabilization | 1.43E-03 |
| 25 | GO:0006694: steroid biosynthetic process | 1.71E-03 |
| 26 | GO:0010019: chloroplast-nucleus signaling pathway | 1.71E-03 |
| 27 | GO:0010555: response to mannitol | 1.71E-03 |
| 28 | GO:0010067: procambium histogenesis | 1.71E-03 |
| 29 | GO:0009772: photosynthetic electron transport in photosystem II | 2.01E-03 |
| 30 | GO:0043090: amino acid import | 2.01E-03 |
| 31 | GO:0010196: nonphotochemical quenching | 2.01E-03 |
| 32 | GO:0000028: ribosomal small subunit assembly | 2.32E-03 |
| 33 | GO:0009642: response to light intensity | 2.32E-03 |
| 34 | GO:0034599: cellular response to oxidative stress | 2.59E-03 |
| 35 | GO:0009808: lignin metabolic process | 2.65E-03 |
| 36 | GO:0080144: amino acid homeostasis | 3.00E-03 |
| 37 | GO:0042538: hyperosmotic salinity response | 3.99E-03 |
| 38 | GO:0043085: positive regulation of catalytic activity | 4.12E-03 |
| 39 | GO:0009773: photosynthetic electron transport in photosystem I | 4.12E-03 |
| 40 | GO:0006813: potassium ion transport | 4.29E-03 |
| 41 | GO:0045454: cell redox homeostasis | 4.53E-03 |
| 42 | GO:0006006: glucose metabolic process | 4.93E-03 |
| 43 | GO:0010229: inflorescence development | 4.93E-03 |
| 44 | GO:0010102: lateral root morphogenesis | 4.93E-03 |
| 45 | GO:0006869: lipid transport | 5.09E-03 |
| 46 | GO:0019253: reductive pentose-phosphate cycle | 5.36E-03 |
| 47 | GO:0010207: photosystem II assembly | 5.36E-03 |
| 48 | GO:0010223: secondary shoot formation | 5.36E-03 |
| 49 | GO:0010540: basipetal auxin transport | 5.36E-03 |
| 50 | GO:0010143: cutin biosynthetic process | 5.36E-03 |
| 51 | GO:0016042: lipid catabolic process | 5.70E-03 |
| 52 | GO:0010025: wax biosynthetic process | 6.25E-03 |
| 53 | GO:0007010: cytoskeleton organization | 6.71E-03 |
| 54 | GO:0051017: actin filament bundle assembly | 6.71E-03 |
| 55 | GO:0019344: cysteine biosynthetic process | 6.71E-03 |
| 56 | GO:0000027: ribosomal large subunit assembly | 6.71E-03 |
| 57 | GO:0061077: chaperone-mediated protein folding | 7.68E-03 |
| 58 | GO:0016226: iron-sulfur cluster assembly | 8.18E-03 |
| 59 | GO:0030245: cellulose catabolic process | 8.18E-03 |
| 60 | GO:0009411: response to UV | 8.69E-03 |
| 61 | GO:0001944: vasculature development | 8.69E-03 |
| 62 | GO:0019722: calcium-mediated signaling | 9.21E-03 |
| 63 | GO:0010089: xylem development | 9.21E-03 |
| 64 | GO:0042335: cuticle development | 1.03E-02 |
| 65 | GO:0006662: glycerol ether metabolic process | 1.09E-02 |
| 66 | GO:0048825: cotyledon development | 1.20E-02 |
| 67 | GO:0019252: starch biosynthetic process | 1.20E-02 |
| 68 | GO:0009416: response to light stimulus | 1.23E-02 |
| 69 | GO:0000302: response to reactive oxygen species | 1.26E-02 |
| 70 | GO:0016132: brassinosteroid biosynthetic process | 1.26E-02 |
| 71 | GO:0007267: cell-cell signaling | 1.50E-02 |
| 72 | GO:0071805: potassium ion transmembrane transport | 1.50E-02 |
| 73 | GO:0010027: thylakoid membrane organization | 1.63E-02 |
| 74 | GO:0009911: positive regulation of flower development | 1.63E-02 |
| 75 | GO:0006457: protein folding | 1.70E-02 |
| 76 | GO:0010411: xyloglucan metabolic process | 1.83E-02 |
| 77 | GO:0000160: phosphorelay signal transduction system | 2.04E-02 |
| 78 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.10E-02 |
| 79 | GO:0006811: ion transport | 2.11E-02 |
| 80 | GO:0009834: plant-type secondary cell wall biogenesis | 2.11E-02 |
| 81 | GO:0009631: cold acclimation | 2.19E-02 |
| 82 | GO:0007568: aging | 2.19E-02 |
| 83 | GO:0016051: carbohydrate biosynthetic process | 2.33E-02 |
| 84 | GO:0042546: cell wall biogenesis | 2.88E-02 |
| 85 | GO:0071555: cell wall organization | 2.98E-02 |
| 86 | GO:0042742: defense response to bacterium | 2.98E-02 |
| 87 | GO:0009736: cytokinin-activated signaling pathway | 3.46E-02 |
| 88 | GO:0006096: glycolytic process | 3.89E-02 |
| 89 | GO:0009740: gibberellic acid mediated signaling pathway | 4.26E-02 |
| 90 | GO:0009908: flower development | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 2 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 3 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 4 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 5 | GO:0019843: rRNA binding | 9.91E-12 |
| 6 | GO:0003735: structural constituent of ribosome | 1.32E-11 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.96E-08 |
| 8 | GO:0005528: FK506 binding | 1.67E-05 |
| 9 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.27E-04 |
| 10 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.94E-04 |
| 11 | GO:0016788: hydrolase activity, acting on ester bonds | 4.61E-04 |
| 12 | GO:0030267: glyoxylate reductase (NADP) activity | 4.86E-04 |
| 13 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 4.86E-04 |
| 14 | GO:0050734: hydroxycinnamoyltransferase activity | 4.86E-04 |
| 15 | GO:0008097: 5S rRNA binding | 6.95E-04 |
| 16 | GO:0001872: (1->3)-beta-D-glucan binding | 6.95E-04 |
| 17 | GO:0004659: prenyltransferase activity | 9.21E-04 |
| 18 | GO:0004040: amidase activity | 1.16E-03 |
| 19 | GO:0016208: AMP binding | 1.43E-03 |
| 20 | GO:0016688: L-ascorbate peroxidase activity | 1.43E-03 |
| 21 | GO:0004130: cytochrome-c peroxidase activity | 1.43E-03 |
| 22 | GO:0051753: mannan synthase activity | 1.71E-03 |
| 23 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.71E-03 |
| 24 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.71E-03 |
| 25 | GO:0004559: alpha-mannosidase activity | 1.71E-03 |
| 26 | GO:0051920: peroxiredoxin activity | 1.71E-03 |
| 27 | GO:0004747: ribokinase activity | 1.71E-03 |
| 28 | GO:0008865: fructokinase activity | 2.32E-03 |
| 29 | GO:0016209: antioxidant activity | 2.32E-03 |
| 30 | GO:0008047: enzyme activator activity | 3.73E-03 |
| 31 | GO:0052689: carboxylic ester hydrolase activity | 4.10E-03 |
| 32 | GO:0051536: iron-sulfur cluster binding | 6.71E-03 |
| 33 | GO:0015079: potassium ion transmembrane transporter activity | 7.19E-03 |
| 34 | GO:0008324: cation transmembrane transporter activity | 7.19E-03 |
| 35 | GO:0030570: pectate lyase activity | 8.69E-03 |
| 36 | GO:0008810: cellulase activity | 8.69E-03 |
| 37 | GO:0008289: lipid binding | 9.00E-03 |
| 38 | GO:0047134: protein-disulfide reductase activity | 9.75E-03 |
| 39 | GO:0008080: N-acetyltransferase activity | 1.09E-02 |
| 40 | GO:0004791: thioredoxin-disulfide reductase activity | 1.14E-02 |
| 41 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.26E-02 |
| 42 | GO:0000156: phosphorelay response regulator activity | 1.38E-02 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.38E-02 |
| 44 | GO:0051015: actin filament binding | 1.38E-02 |
| 45 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.50E-02 |
| 46 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.74E-02 |
| 47 | GO:0030247: polysaccharide binding | 1.83E-02 |
| 48 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.83E-02 |
| 49 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.19E-02 |
| 50 | GO:0004871: signal transducer activity | 2.55E-02 |
| 51 | GO:0050661: NADP binding | 2.56E-02 |
| 52 | GO:0043621: protein self-association | 2.96E-02 |
| 53 | GO:0051287: NAD binding | 3.20E-02 |
| 54 | GO:0009055: electron carrier activity | 3.21E-02 |
| 55 | GO:0015171: amino acid transmembrane transporter activity | 3.72E-02 |
| 56 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.98E-02 |
| 57 | GO:0030599: pectinesterase activity | 4.26E-02 |
| 58 | GO:0003779: actin binding | 4.35E-02 |
| 59 | GO:0015035: protein disulfide oxidoreductase activity | 4.53E-02 |
| 60 | GO:0004672: protein kinase activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 2.00E-17 |
| 3 | GO:0009507: chloroplast | 2.21E-14 |
| 4 | GO:0009941: chloroplast envelope | 3.93E-12 |
| 5 | GO:0005840: ribosome | 7.36E-10 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 1.35E-08 |
| 7 | GO:0031977: thylakoid lumen | 1.84E-08 |
| 8 | GO:0009579: thylakoid | 1.82E-06 |
| 9 | GO:0046658: anchored component of plasma membrane | 2.49E-06 |
| 10 | GO:0048046: apoplast | 4.80E-06 |
| 11 | GO:0031225: anchored component of membrane | 4.83E-06 |
| 12 | GO:0009547: plastid ribosome | 1.27E-04 |
| 13 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.27E-04 |
| 14 | GO:0009534: chloroplast thylakoid | 1.48E-04 |
| 15 | GO:0005886: plasma membrane | 1.88E-04 |
| 16 | GO:0000311: plastid large ribosomal subunit | 2.48E-04 |
| 17 | GO:0005618: cell wall | 6.73E-04 |
| 18 | GO:0032432: actin filament bundle | 6.95E-04 |
| 19 | GO:0009535: chloroplast thylakoid membrane | 2.25E-03 |
| 20 | GO:0009505: plant-type cell wall | 2.84E-03 |
| 21 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.00E-03 |
| 22 | GO:0005884: actin filament | 4.12E-03 |
| 23 | GO:0009506: plasmodesma | 4.53E-03 |
| 24 | GO:0000312: plastid small ribosomal subunit | 5.36E-03 |
| 25 | GO:0005875: microtubule associated complex | 6.25E-03 |
| 26 | GO:0015935: small ribosomal subunit | 7.68E-03 |
| 27 | GO:0005770: late endosome | 1.09E-02 |
| 28 | GO:0005778: peroxisomal membrane | 1.50E-02 |
| 29 | GO:0010319: stromule | 1.50E-02 |
| 30 | GO:0005576: extracellular region | 1.56E-02 |
| 31 | GO:0016020: membrane | 1.64E-02 |
| 32 | GO:0005874: microtubule | 1.96E-02 |
| 33 | GO:0031969: chloroplast membrane | 2.03E-02 |
| 34 | GO:0015934: large ribosomal subunit | 2.19E-02 |