co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G45780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071260: cellular response to mechanical stimulus	0.00E+00
2	GO:0009877: nodulation	0.00E+00
3	GO:0010203: response to very low fluence red light stimulus	0.00E+00
4	GO:1904962: plastid to vacuole vesicle-mediated transport	0.00E+00
5	GO:0071211: protein targeting to vacuole involved in autophagy	0.00E+00
6	GO:0071311: cellular response to acetate	0.00E+00
7	GO:0010600: regulation of auxin biosynthetic process	3.07E-06
8	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.16E-05
9	GO:0010161: red light signaling pathway	1.59E-05
10	GO:0010928: regulation of auxin mediated signaling pathway	2.11E-05
11	GO:0048657: anther wall tapetum cell differentiation	5.34E-05
12	GO:0015812: gamma-aminobutyric acid transport	5.34E-05
13	GO:0032958: inositol phosphate biosynthetic process	5.34E-05
14	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	5.34E-05
15	GO:0009585: red, far-red light phototransduction	1.07E-04
16	GO:0080171: lytic vacuole organization	1.30E-04
17	GO:0010017: red or far-red light signaling pathway	1.84E-04
18	GO:1902448: positive regulation of shade avoidance	2.22E-04
19	GO:0071230: cellular response to amino acid stimulus	2.22E-04
20	GO:0017006: protein-tetrapyrrole linkage	2.22E-04
21	GO:0090153: regulation of sphingolipid biosynthetic process	2.22E-04
22	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.40E-04
23	GO:1901000: regulation of response to salt stress	3.25E-04
24	GO:0009584: detection of visible light	3.25E-04
25	GO:0044211: CTP salvage	3.25E-04
26	GO:0030100: regulation of endocytosis	3.25E-04
27	GO:0006020: inositol metabolic process	3.25E-04
28	GO:0009738: abscisic acid-activated signaling pathway	4.29E-04
29	GO:0010483: pollen tube reception	4.35E-04
30	GO:0044206: UMP salvage	4.35E-04
31	GO:0009416: response to light stimulus	4.52E-04
32	GO:0010029: regulation of seed germination	5.28E-04
33	GO:0030308: negative regulation of cell growth	5.52E-04
34	GO:0043097: pyrimidine nucleoside salvage	5.52E-04
35	GO:0006461: protein complex assembly	5.52E-04
36	GO:0009817: defense response to fungus, incompatible interaction	6.46E-04
37	GO:0031053: primary miRNA processing	6.76E-04
38	GO:0006206: pyrimidine nucleobase metabolic process	6.76E-04
39	GO:0006865: amino acid transport	7.77E-04
40	GO:0071470: cellular response to osmotic stress	8.05E-04
41	GO:0017148: negative regulation of translation	8.05E-04
42	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	8.05E-04
43	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	8.05E-04
44	GO:0010044: response to aluminum ion	9.40E-04
45	GO:0009640: photomorphogenesis	1.03E-03
46	GO:0010078: maintenance of root meristem identity	1.08E-03
47	GO:0009704: de-etiolation	1.08E-03
48	GO:0008643: carbohydrate transport	1.11E-03
49	GO:0009827: plant-type cell wall modification	1.23E-03
50	GO:0007338: single fertilization	1.38E-03
51	GO:0046685: response to arsenic-containing substance	1.38E-03
52	GO:0009638: phototropism	1.54E-03
53	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.54E-03
54	GO:0008356: asymmetric cell division	1.54E-03
55	GO:0006535: cysteine biosynthetic process from serine	1.71E-03
56	GO:0006816: calcium ion transport	1.88E-03
57	GO:0009651: response to salt stress	2.01E-03
58	GO:0009266: response to temperature stimulus	2.43E-03
59	GO:0090351: seedling development	2.63E-03
60	GO:0035556: intracellular signal transduction	2.98E-03
61	GO:0019344: cysteine biosynthetic process	3.03E-03
62	GO:0006351: transcription, DNA-templated	3.16E-03
63	GO:0006874: cellular calcium ion homeostasis	3.24E-03
64	GO:0007623: circadian rhythm	3.30E-03
65	GO:0003333: amino acid transmembrane transport	3.46E-03
66	GO:0019748: secondary metabolic process	3.68E-03
67	GO:0009739: response to gibberellin	3.69E-03
68	GO:0009693: ethylene biosynthetic process	3.90E-03
69	GO:0006355: regulation of transcription, DNA-templated	3.96E-03
70	GO:0009737: response to abscisic acid	4.10E-03
71	GO:0010584: pollen exine formation	4.13E-03
72	GO:0019722: calcium-mediated signaling	4.13E-03
73	GO:0070417: cellular response to cold	4.36E-03
74	GO:0034220: ion transmembrane transport	4.60E-03
75	GO:0010268: brassinosteroid homeostasis	4.84E-03
76	GO:0009741: response to brassinosteroid	4.84E-03
77	GO:0006814: sodium ion transport	5.09E-03
78	GO:0009791: post-embryonic development	5.34E-03
79	GO:0006970: response to osmotic stress	5.48E-03
80	GO:0000302: response to reactive oxygen species	5.60E-03
81	GO:0016132: brassinosteroid biosynthetic process	5.60E-03
82	GO:0009630: gravitropism	5.86E-03
83	GO:0009723: response to ethylene	5.89E-03
84	GO:1901657: glycosyl compound metabolic process	6.12E-03
85	GO:0080167: response to karrikin	6.31E-03
86	GO:0016125: sterol metabolic process	6.39E-03
87	GO:0044550: secondary metabolite biosynthetic process	6.85E-03
88	GO:0009911: positive regulation of flower development	7.22E-03
89	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	7.50E-03
90	GO:0048573: photoperiodism, flowering	8.09E-03
91	GO:0006468: protein phosphorylation	8.63E-03
92	GO:0018298: protein-chromophore linkage	8.68E-03
93	GO:0000160: phosphorelay signal transduction system	8.99E-03
94	GO:0010218: response to far red light	9.30E-03
95	GO:0048364: root development	9.71E-03
96	GO:0042542: response to hydrogen peroxide	1.19E-02
97	GO:0010224: response to UV-B	1.55E-02
98	GO:0006857: oligopeptide transport	1.59E-02
99	GO:0009909: regulation of flower development	1.63E-02
100	GO:0009611: response to wounding	1.69E-02
101	GO:0009624: response to nematode	1.94E-02
102	GO:0009742: brassinosteroid mediated signaling pathway	2.02E-02
103	GO:0055085: transmembrane transport	2.11E-02
104	GO:0000398: mRNA splicing, via spliceosome	2.15E-02
105	GO:0009058: biosynthetic process	2.37E-02
106	GO:0010228: vegetative to reproductive phase transition of meristem	2.96E-02
107	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.11E-02
108	GO:0010468: regulation of gene expression	3.25E-02
109	GO:0008380: RNA splicing	3.25E-02
110	GO:0009414: response to water deprivation	3.28E-02
111	GO:0009826: unidimensional cell growth	3.81E-02
112	GO:0007049: cell cycle	4.23E-02
113	GO:0016192: vesicle-mediated transport	4.73E-02
114	GO:0046777: protein autophosphorylation	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
2	GO:0004567: beta-mannosidase activity	0.00E+00
3	GO:0080082: esculin beta-glucosidase activity	0.00E+00
4	GO:0015276: ligand-gated ion channel activity	0.00E+00
5	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
6	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
7	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
8	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
9	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.45E-05
10	GO:0080079: cellobiose glucosidase activity	5.34E-05
11	GO:0008066: glutamate receptor activity	5.34E-05
12	GO:0000828: inositol hexakisphosphate kinase activity	5.34E-05
13	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	5.34E-05
14	GO:0008158: hedgehog receptor activity	5.34E-05
15	GO:0031516: far-red light photoreceptor activity	5.34E-05
16	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	5.34E-05
17	GO:0000829: inositol heptakisphosphate kinase activity	5.34E-05
18	GO:0004497: monooxygenase activity	9.02E-05
19	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.30E-04
20	GO:0015180: L-alanine transmembrane transporter activity	1.30E-04
21	GO:0050017: L-3-cyanoalanine synthase activity	1.30E-04
22	GO:0009883: red or far-red light photoreceptor activity	1.30E-04
23	GO:0008020: G-protein coupled photoreceptor activity	2.22E-04
24	GO:0015181: arginine transmembrane transporter activity	3.25E-04
25	GO:0015189: L-lysine transmembrane transporter activity	3.25E-04
26	GO:0005313: L-glutamate transmembrane transporter activity	4.35E-04
27	GO:0004845: uracil phosphoribosyltransferase activity	4.35E-04
28	GO:0004672: protein kinase activity	4.74E-04
29	GO:0005275: amine transmembrane transporter activity	5.52E-04
30	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	5.52E-04
31	GO:0019825: oxygen binding	7.72E-04
32	GO:0004849: uridine kinase activity	8.05E-04
33	GO:0004124: cysteine synthase activity	8.05E-04
34	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	1.23E-03
35	GO:0005506: iron ion binding	1.27E-03
36	GO:0015171: amino acid transmembrane transporter activity	1.51E-03
37	GO:0005515: protein binding	1.54E-03
38	GO:0004673: protein histidine kinase activity	1.71E-03
39	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.71E-03
40	GO:0004565: beta-galactosidase activity	2.25E-03
41	GO:0005315: inorganic phosphate transmembrane transporter activity	2.25E-03
42	GO:0000155: phosphorelay sensor kinase activity	2.25E-03
43	GO:0005262: calcium channel activity	2.25E-03
44	GO:0020037: heme binding	2.60E-03
45	GO:0005217: intracellular ligand-gated ion channel activity	2.63E-03
46	GO:0003712: transcription cofactor activity	2.63E-03
47	GO:0004970: ionotropic glutamate receptor activity	2.63E-03
48	GO:0015144: carbohydrate transmembrane transporter activity	2.87E-03
49	GO:0015297: antiporter activity	3.16E-03
50	GO:0004707: MAP kinase activity	3.46E-03
51	GO:0022891: substrate-specific transmembrane transporter activity	3.90E-03
52	GO:0004674: protein serine/threonine kinase activity	3.93E-03
53	GO:0008514: organic anion transmembrane transporter activity	4.13E-03
54	GO:0000156: phosphorelay response regulator activity	6.12E-03
55	GO:0003700: transcription factor activity, sequence-specific DNA binding	7.59E-03
56	GO:0102483: scopolin beta-glucosidase activity	8.09E-03
57	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	8.15E-03
58	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	9.30E-03
59	GO:0008422: beta-glucosidase activity	1.09E-02
60	GO:0003677: DNA binding	1.12E-02
61	GO:0016301: kinase activity	1.13E-02
62	GO:0004185: serine-type carboxypeptidase activity	1.23E-02
63	GO:0015293: symporter activity	1.33E-02
64	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.74E-02
65	GO:0022857: transmembrane transporter activity	1.86E-02
66	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.19E-02
67	GO:0030170: pyridoxal phosphate binding	2.46E-02
68	GO:0005351: sugar:proton symporter activity	2.82E-02
69	GO:0042802: identical protein binding	3.40E-02
70	GO:0046983: protein dimerization activity	4.47E-02
71	GO:0061630: ubiquitin protein ligase activity	4.73E-02
72	GO:0005524: ATP binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0043680: filiform apparatus	0.00E+00
2	GO:0010445: nuclear dicing body	4.35E-04
3	GO:0005798: Golgi-associated vesicle	6.76E-04
4	GO:0005886: plasma membrane	1.43E-03
5	GO:0016604: nuclear body	1.54E-03
6	GO:0016607: nuclear speck	1.66E-03
7	GO:0016020: membrane	2.76E-03
8	GO:0005769: early endosome	2.83E-03
9	GO:0016021: integral component of membrane	2.89E-03
10	GO:0005634: nucleus	1.14E-02
11	GO:0031966: mitochondrial membrane	1.44E-02
12	GO:0005681: spliceosomal complex	1.70E-02
13	GO:0010008: endosome membrane	1.74E-02
14	GO:0010287: plastoglobule	2.19E-02
15	GO:0005623: cell	2.32E-02
16	GO:0005618: cell wall	3.85E-02
17	GO:0009536: plastid	4.11E-02
18	GO:0009505: plant-type cell wall	4.20E-02
19	GO:0031969: chloroplast membrane	4.56E-02