co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G45040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
4	GO:0006593: ornithine catabolic process	0.00E+00
5	GO:0010055: atrichoblast differentiation	0.00E+00
6	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
7	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
8	GO:0006983: ER overload response	0.00E+00
9	GO:0033587: shikimate biosynthetic process	0.00E+00
10	GO:0051238: sequestering of metal ion	0.00E+00
11	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.17E-05
12	GO:0009626: plant-type hypersensitive response	4.52E-05
13	GO:0006468: protein phosphorylation	1.75E-04
14	GO:0009819: drought recovery	2.52E-04
15	GO:0032107: regulation of response to nutrient levels	2.65E-04
16	GO:1903648: positive regulation of chlorophyll catabolic process	2.65E-04
17	GO:0019628: urate catabolic process	2.65E-04
18	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.65E-04
19	GO:0010036: response to boron-containing substance	2.65E-04
20	GO:0034214: protein hexamerization	2.65E-04
21	GO:0019544: arginine catabolic process to glutamate	2.65E-04
22	GO:0042759: long-chain fatty acid biosynthetic process	2.65E-04
23	GO:0006144: purine nucleobase metabolic process	2.65E-04
24	GO:0043069: negative regulation of programmed cell death	5.20E-04
25	GO:0009627: systemic acquired resistance	5.73E-04
26	GO:0031648: protein destabilization	5.83E-04
27	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	5.83E-04
28	GO:0080029: cellular response to boron-containing substance levels	5.83E-04
29	GO:0006672: ceramide metabolic process	5.83E-04
30	GO:0010163: high-affinity potassium ion import	5.83E-04
31	GO:0051258: protein polymerization	5.83E-04
32	GO:0043066: negative regulation of apoptotic process	5.83E-04
33	GO:0019441: tryptophan catabolic process to kynurenine	5.83E-04
34	GO:0097054: L-glutamate biosynthetic process	5.83E-04
35	GO:0009682: induced systemic resistance	5.99E-04
36	GO:0010447: response to acidic pH	9.47E-04
37	GO:0048281: inflorescence morphogenesis	9.47E-04
38	GO:0051646: mitochondrion localization	9.47E-04
39	GO:0010359: regulation of anion channel activity	9.47E-04
40	GO:0061158: 3'-UTR-mediated mRNA destabilization	9.47E-04
41	GO:0070588: calcium ion transmembrane transport	9.75E-04
42	GO:0006631: fatty acid metabolic process	1.16E-03
43	GO:0051707: response to other organism	1.28E-03
44	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.35E-03
45	GO:0046713: borate transport	1.35E-03
46	GO:0009399: nitrogen fixation	1.35E-03
47	GO:0006537: glutamate biosynthetic process	1.35E-03
48	GO:0015700: arsenite transport	1.35E-03
49	GO:0001676: long-chain fatty acid metabolic process	1.35E-03
50	GO:0046513: ceramide biosynthetic process	1.35E-03
51	GO:0031408: oxylipin biosynthetic process	1.44E-03
52	GO:0009617: response to bacterium	1.44E-03
53	GO:0016998: cell wall macromolecule catabolic process	1.44E-03
54	GO:0019676: ammonia assimilation cycle	1.81E-03
55	GO:0006536: glutamate metabolic process	1.81E-03
56	GO:0009809: lignin biosynthetic process	1.87E-03
57	GO:0042391: regulation of membrane potential	2.19E-03
58	GO:0030308: negative regulation of cell growth	2.31E-03
59	GO:0000304: response to singlet oxygen	2.31E-03
60	GO:0046686: response to cadmium ion	2.82E-03
61	GO:0006561: proline biosynthetic process	2.85E-03
62	GO:0015691: cadmium ion transport	2.85E-03
63	GO:0070814: hydrogen sulfide biosynthetic process	2.85E-03
64	GO:1902456: regulation of stomatal opening	2.85E-03
65	GO:1900425: negative regulation of defense response to bacterium	2.85E-03
66	GO:0009117: nucleotide metabolic process	2.85E-03
67	GO:0002238: response to molecule of fungal origin	2.85E-03
68	GO:0002229: defense response to oomycetes	2.90E-03
69	GO:0009738: abscisic acid-activated signaling pathway	3.26E-03
70	GO:0006694: steroid biosynthetic process	3.43E-03
71	GO:0042742: defense response to bacterium	3.62E-03
72	GO:0010044: response to aluminum ion	4.04E-03
73	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	4.04E-03
74	GO:0050829: defense response to Gram-negative bacterium	4.04E-03
75	GO:1900057: positive regulation of leaf senescence	4.04E-03
76	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.04E-03
77	GO:1902074: response to salt	4.04E-03
78	GO:0009061: anaerobic respiration	4.69E-03
79	GO:0030091: protein repair	4.69E-03
80	GO:0006605: protein targeting	4.69E-03
81	GO:0055114: oxidation-reduction process	5.22E-03
82	GO:0009808: lignin metabolic process	5.37E-03
83	GO:0010120: camalexin biosynthetic process	5.37E-03
84	GO:0006526: arginine biosynthetic process	5.37E-03
85	GO:0010204: defense response signaling pathway, resistance gene-independent	5.37E-03
86	GO:0009817: defense response to fungus, incompatible interaction	5.46E-03
87	GO:0010150: leaf senescence	5.88E-03
88	GO:0009407: toxin catabolic process	6.03E-03
89	GO:0007338: single fertilization	6.09E-03
90	GO:0046685: response to arsenic-containing substance	6.09E-03
91	GO:0006098: pentose-phosphate shunt	6.09E-03
92	GO:0009821: alkaloid biosynthetic process	6.09E-03
93	GO:0090305: nucleic acid phosphodiester bond hydrolysis	6.09E-03
94	GO:0034765: regulation of ion transmembrane transport	6.09E-03
95	GO:0090333: regulation of stomatal closure	6.09E-03
96	GO:0048268: clathrin coat assembly	6.83E-03
97	GO:0008202: steroid metabolic process	6.83E-03
98	GO:0048829: root cap development	7.61E-03
99	GO:0019538: protein metabolic process	7.61E-03
100	GO:0007064: mitotic sister chromatid cohesion	7.61E-03
101	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.61E-03
102	GO:0006535: cysteine biosynthetic process from serine	7.61E-03
103	GO:0000103: sulfate assimilation	7.61E-03
104	GO:0006032: chitin catabolic process	7.61E-03
105	GO:0000038: very long-chain fatty acid metabolic process	8.42E-03
106	GO:0000272: polysaccharide catabolic process	8.42E-03
107	GO:0048229: gametophyte development	8.42E-03
108	GO:0000266: mitochondrial fission	9.26E-03
109	GO:0012501: programmed cell death	9.26E-03
110	GO:0055046: microgametogenesis	1.01E-02
111	GO:0009636: response to toxic substance	1.01E-02
112	GO:0002237: response to molecule of bacterial origin	1.10E-02
113	GO:0006970: response to osmotic stress	1.13E-02
114	GO:0010053: root epidermal cell differentiation	1.20E-02
115	GO:0007031: peroxisome organization	1.20E-02
116	GO:0010167: response to nitrate	1.20E-02
117	GO:0080167: response to karrikin	1.35E-02
118	GO:2000377: regulation of reactive oxygen species metabolic process	1.39E-02
119	GO:0019344: cysteine biosynthetic process	1.39E-02
120	GO:0035556: intracellular signal transduction	1.40E-02
121	GO:0046777: protein autophosphorylation	1.47E-02
122	GO:0009695: jasmonic acid biosynthetic process	1.49E-02
123	GO:0009620: response to fungus	1.57E-02
124	GO:0031348: negative regulation of defense response	1.70E-02
125	GO:0071456: cellular response to hypoxia	1.70E-02
126	GO:0010227: floral organ abscission	1.81E-02
127	GO:0009561: megagametogenesis	1.92E-02
128	GO:0070417: cellular response to cold	2.03E-02
129	GO:0032259: methylation	2.09E-02
130	GO:0006885: regulation of pH	2.26E-02
131	GO:0009845: seed germination	2.34E-02
132	GO:0048544: recognition of pollen	2.38E-02
133	GO:0006623: protein targeting to vacuole	2.51E-02
134	GO:0009749: response to glucose	2.51E-02
135	GO:0071554: cell wall organization or biogenesis	2.63E-02
136	GO:0006633: fatty acid biosynthetic process	2.72E-02
137	GO:1901657: glycosyl compound metabolic process	2.88E-02
138	GO:0030163: protein catabolic process	2.88E-02
139	GO:0050832: defense response to fungus	2.95E-02
140	GO:0009567: double fertilization forming a zygote and endosperm	3.02E-02
141	GO:0010252: auxin homeostasis	3.02E-02
142	GO:0006914: autophagy	3.02E-02
143	GO:0051607: defense response to virus	3.28E-02
144	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.33E-02
145	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.56E-02
146	GO:0010029: regulation of seed germination	3.56E-02
147	GO:0009816: defense response to bacterium, incompatible interaction	3.56E-02
148	GO:0009651: response to salt stress	3.69E-02
149	GO:0006979: response to oxidative stress	3.70E-02
150	GO:0006950: response to stress	3.84E-02
151	GO:0009737: response to abscisic acid	4.23E-02
152	GO:0010311: lateral root formation	4.28E-02
153	GO:0010043: response to zinc ion	4.58E-02
154	GO:0009631: cold acclimation	4.58E-02
155	GO:0048527: lateral root development	4.58E-02
156	GO:0010119: regulation of stomatal movement	4.58E-02
157	GO:0016051: carbohydrate biosynthetic process	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0080138: borate uptake transmembrane transporter activity	0.00E+00
2	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0015930: glutamate synthase activity	0.00E+00
5	GO:0004846: urate oxidase activity	0.00E+00
6	GO:0008777: acetylornithine deacetylase activity	0.00E+00
7	GO:0005496: steroid binding	7.56E-05
8	GO:0102391: decanoate--CoA ligase activity	1.51E-04
9	GO:0004467: long-chain fatty acid-CoA ligase activity	1.99E-04
10	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.65E-04
11	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.65E-04
12	GO:0004321: fatty-acyl-CoA synthase activity	2.65E-04
13	GO:0016041: glutamate synthase (ferredoxin) activity	2.65E-04
14	GO:0004674: protein serine/threonine kinase activity	2.86E-04
15	GO:0005524: ATP binding	5.10E-04
16	GO:0016301: kinase activity	5.62E-04
17	GO:0050291: sphingosine N-acyltransferase activity	5.83E-04
18	GO:0015105: arsenite transmembrane transporter activity	5.83E-04
19	GO:0032934: sterol binding	5.83E-04
20	GO:0004061: arylformamidase activity	5.83E-04
21	GO:0004385: guanylate kinase activity	5.83E-04
22	GO:0005388: calcium-transporting ATPase activity	7.76E-04
23	GO:0005047: signal recognition particle binding	9.47E-04
24	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	9.47E-04
25	GO:0000975: regulatory region DNA binding	9.47E-04
26	GO:0004781: sulfate adenylyltransferase (ATP) activity	9.47E-04
27	GO:0004364: glutathione transferase activity	1.22E-03
28	GO:0004351: glutamate decarboxylase activity	1.35E-03
29	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.35E-03
30	GO:0046715: borate transmembrane transporter activity	1.35E-03
31	GO:0043015: gamma-tubulin binding	1.81E-03
32	GO:0010279: indole-3-acetic acid amido synthetase activity	1.81E-03
33	GO:0005249: voltage-gated potassium channel activity	2.19E-03
34	GO:0030551: cyclic nucleotide binding	2.19E-03
35	GO:0004356: glutamate-ammonia ligase activity	2.31E-03
36	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	2.31E-03
37	GO:0051538: 3 iron, 4 sulfur cluster binding	2.31E-03
38	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.43E-03
39	GO:0005242: inward rectifier potassium channel activity	3.43E-03
40	GO:0004124: cysteine synthase activity	3.43E-03
41	GO:0051920: peroxiredoxin activity	3.43E-03
42	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.43E-03
43	GO:0102425: myricetin 3-O-glucosyltransferase activity	4.04E-03
44	GO:0102360: daphnetin 3-O-glucosyltransferase activity	4.04E-03
45	GO:0051213: dioxygenase activity	4.19E-03
46	GO:0030170: pyridoxal phosphate binding	4.46E-03
47	GO:0016209: antioxidant activity	4.69E-03
48	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.69E-03
49	GO:0004033: aldo-keto reductase (NADP) activity	4.69E-03
50	GO:0052747: sinapyl alcohol dehydrogenase activity	4.69E-03
51	GO:0008142: oxysterol binding	5.37E-03
52	GO:0030246: carbohydrate binding	5.81E-03
53	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.09E-03
54	GO:0016207: 4-coumarate-CoA ligase activity	6.09E-03
55	GO:0005516: calmodulin binding	7.06E-03
56	GO:0004712: protein serine/threonine/tyrosine kinase activity	7.57E-03
57	GO:0004568: chitinase activity	7.61E-03
58	GO:0008171: O-methyltransferase activity	7.61E-03
59	GO:0005545: 1-phosphatidylinositol binding	7.61E-03
60	GO:0004713: protein tyrosine kinase activity	7.61E-03
61	GO:0004672: protein kinase activity	7.69E-03
62	GO:0003680: AT DNA binding	8.42E-03
63	GO:0008794: arsenate reductase (glutaredoxin) activity	8.42E-03
64	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.26E-03
65	GO:0043621: protein self-association	9.68E-03
66	GO:0046872: metal ion binding	9.80E-03
67	GO:0004601: peroxidase activity	1.03E-02
68	GO:0004175: endopeptidase activity	1.10E-02
69	GO:0004190: aspartic-type endopeptidase activity	1.20E-02
70	GO:0030552: cAMP binding	1.20E-02
71	GO:0030553: cGMP binding	1.20E-02
72	GO:0008061: chitin binding	1.20E-02
73	GO:0043130: ubiquitin binding	1.39E-02
74	GO:0001046: core promoter sequence-specific DNA binding	1.39E-02
75	GO:0005216: ion channel activity	1.49E-02
76	GO:0008408: 3'-5' exonuclease activity	1.59E-02
77	GO:0035251: UDP-glucosyltransferase activity	1.59E-02
78	GO:0015035: protein disulfide oxidoreductase activity	1.78E-02
79	GO:0003727: single-stranded RNA binding	1.92E-02
80	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.92E-02
81	GO:0005451: monovalent cation:proton antiporter activity	2.15E-02
82	GO:0030276: clathrin binding	2.26E-02
83	GO:0008080: N-acetyltransferase activity	2.26E-02
84	GO:0015299: solute:proton antiporter activity	2.38E-02
85	GO:0020037: heme binding	2.58E-02
86	GO:0015385: sodium:proton antiporter activity	2.88E-02
87	GO:0008017: microtubule binding	3.12E-02
88	GO:0008237: metallopeptidase activity	3.15E-02
89	GO:0016413: O-acetyltransferase activity	3.28E-02
90	GO:0015250: water channel activity	3.42E-02
91	GO:0008375: acetylglucosaminyltransferase activity	3.70E-02
92	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.70E-02
93	GO:0016757: transferase activity, transferring glycosyl groups	3.78E-02
94	GO:0042802: identical protein binding	3.78E-02
95	GO:0004683: calmodulin-dependent protein kinase activity	3.84E-02
96	GO:0102483: scopolin beta-glucosidase activity	3.84E-02
97	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.98E-02
98	GO:0016787: hydrolase activity	4.27E-02
99	GO:0015238: drug transmembrane transporter activity	4.28E-02
100	GO:0008168: methyltransferase activity	4.43E-02
101	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.58E-02
102	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0098687: chromosomal region	0.00E+00
3	GO:0005886: plasma membrane	7.58E-05
4	GO:0005783: endoplasmic reticulum	3.41E-04
5	GO:0016328: lateral plasma membrane	9.47E-04
6	GO:0005794: Golgi apparatus	1.60E-03
7	GO:0005887: integral component of plasma membrane	2.16E-03
8	GO:0005770: late endosome	2.36E-03
9	GO:0005829: cytosol	2.45E-03
10	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	5.37E-03
11	GO:0005737: cytoplasm	7.12E-03
12	GO:0005635: nuclear envelope	1.29E-02
13	GO:0005905: clathrin-coated pit	1.59E-02
14	GO:0030136: clathrin-coated vesicle	2.03E-02
15	GO:0009524: phragmoplast	2.28E-02
16	GO:0043231: intracellular membrane-bounded organelle	2.50E-02
17	GO:0071944: cell periphery	2.88E-02
18	GO:0005778: peroxisomal membrane	3.15E-02
19	GO:0005773: vacuole	3.75E-02
20	GO:0009707: chloroplast outer membrane	4.13E-02
21	GO:0048046: apoplast	4.26E-02
22	GO:0005618: cell wall	4.97E-02