GO Enrichment Analysis of Co-expressed Genes with
AT3G44750
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 2 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 3 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 4 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 5 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 6 | GO:0071433: cell wall repair | 0.00E+00 |
| 7 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 8 | GO:0006412: translation | 4.94E-14 |
| 9 | GO:0006626: protein targeting to mitochondrion | 2.37E-08 |
| 10 | GO:0000027: ribosomal large subunit assembly | 7.09E-08 |
| 11 | GO:0045039: protein import into mitochondrial inner membrane | 1.42E-06 |
| 12 | GO:0007005: mitochondrion organization | 1.03E-05 |
| 13 | GO:0031167: rRNA methylation | 1.08E-05 |
| 14 | GO:0006364: rRNA processing | 1.36E-05 |
| 15 | GO:0042254: ribosome biogenesis | 1.42E-05 |
| 16 | GO:0000470: maturation of LSU-rRNA | 1.65E-05 |
| 17 | GO:0001510: RNA methylation | 5.37E-05 |
| 18 | GO:0046686: response to cadmium ion | 5.69E-05 |
| 19 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 8.25E-05 |
| 20 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.97E-04 |
| 21 | GO:0010220: positive regulation of vernalization response | 1.97E-04 |
| 22 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 1.97E-04 |
| 23 | GO:0055129: L-proline biosynthetic process | 1.97E-04 |
| 24 | GO:0070475: rRNA base methylation | 3.29E-04 |
| 25 | GO:0008652: cellular amino acid biosynthetic process | 3.29E-04 |
| 26 | GO:1902626: assembly of large subunit precursor of preribosome | 3.29E-04 |
| 27 | GO:0002181: cytoplasmic translation | 3.29E-04 |
| 28 | GO:0008033: tRNA processing | 4.61E-04 |
| 29 | GO:0009855: determination of bilateral symmetry | 4.75E-04 |
| 30 | GO:0051205: protein insertion into membrane | 6.32E-04 |
| 31 | GO:0000460: maturation of 5.8S rRNA | 6.32E-04 |
| 32 | GO:1900864: mitochondrial RNA modification | 6.32E-04 |
| 33 | GO:0042273: ribosomal large subunit biogenesis | 6.32E-04 |
| 34 | GO:0032502: developmental process | 6.48E-04 |
| 35 | GO:0071493: cellular response to UV-B | 8.00E-04 |
| 36 | GO:0031365: N-terminal protein amino acid modification | 8.00E-04 |
| 37 | GO:0006461: protein complex assembly | 8.00E-04 |
| 38 | GO:0006561: proline biosynthetic process | 9.77E-04 |
| 39 | GO:0009423: chorismate biosynthetic process | 1.16E-03 |
| 40 | GO:0009088: threonine biosynthetic process | 1.16E-03 |
| 41 | GO:0009955: adaxial/abaxial pattern specification | 1.16E-03 |
| 42 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.36E-03 |
| 43 | GO:0080186: developmental vegetative growth | 1.36E-03 |
| 44 | GO:0042255: ribosome assembly | 1.57E-03 |
| 45 | GO:0050821: protein stabilization | 1.57E-03 |
| 46 | GO:1900865: chloroplast RNA modification | 2.26E-03 |
| 47 | GO:0010162: seed dormancy process | 2.51E-03 |
| 48 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.77E-03 |
| 49 | GO:0009073: aromatic amino acid family biosynthetic process | 2.77E-03 |
| 50 | GO:0016485: protein processing | 2.77E-03 |
| 51 | GO:0009793: embryo development ending in seed dormancy | 2.93E-03 |
| 52 | GO:0010582: floral meristem determinacy | 3.03E-03 |
| 53 | GO:0006820: anion transport | 3.03E-03 |
| 54 | GO:0048467: gynoecium development | 3.59E-03 |
| 55 | GO:0030150: protein import into mitochondrial matrix | 4.48E-03 |
| 56 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.48E-03 |
| 57 | GO:0006334: nucleosome assembly | 5.12E-03 |
| 58 | GO:0009294: DNA mediated transformation | 5.78E-03 |
| 59 | GO:0010197: polar nucleus fusion | 7.20E-03 |
| 60 | GO:0009960: endosperm development | 7.20E-03 |
| 61 | GO:0006635: fatty acid beta-oxidation | 8.33E-03 |
| 62 | GO:0080156: mitochondrial mRNA modification | 8.33E-03 |
| 63 | GO:0016049: cell growth | 1.26E-02 |
| 64 | GO:0006811: ion transport | 1.39E-02 |
| 65 | GO:0048527: lateral root development | 1.44E-02 |
| 66 | GO:0010043: response to zinc ion | 1.44E-02 |
| 67 | GO:0006099: tricarboxylic acid cycle | 1.59E-02 |
| 68 | GO:0008283: cell proliferation | 1.84E-02 |
| 69 | GO:0015031: protein transport | 1.92E-02 |
| 70 | GO:0000154: rRNA modification | 2.00E-02 |
| 71 | GO:0010224: response to UV-B | 2.33E-02 |
| 72 | GO:0009909: regulation of flower development | 2.45E-02 |
| 73 | GO:0009735: response to cytokinin | 2.70E-02 |
| 74 | GO:0009553: embryo sac development | 2.86E-02 |
| 75 | GO:0009845: seed germination | 3.63E-02 |
| 76 | GO:0009451: RNA modification | 4.39E-02 |
| 77 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004735: pyrroline-5-carboxylate reductase activity | 0.00E+00 |
| 2 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 3 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 4 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 5 | GO:0003735: structural constituent of ribosome | 1.51E-17 |
| 6 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.82E-08 |
| 7 | GO:0030515: snoRNA binding | 2.12E-07 |
| 8 | GO:0003723: RNA binding | 1.37E-06 |
| 9 | GO:0008649: rRNA methyltransferase activity | 1.42E-06 |
| 10 | GO:0003746: translation elongation factor activity | 4.22E-06 |
| 11 | GO:0005507: copper ion binding | 5.21E-05 |
| 12 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 8.25E-05 |
| 13 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.97E-04 |
| 14 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.97E-04 |
| 15 | GO:0043021: ribonucleoprotein complex binding | 1.97E-04 |
| 16 | GO:0003729: mRNA binding | 3.00E-04 |
| 17 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.29E-04 |
| 18 | GO:0070180: large ribosomal subunit rRNA binding | 3.29E-04 |
| 19 | GO:0008469: histone-arginine N-methyltransferase activity | 3.29E-04 |
| 20 | GO:0004072: aspartate kinase activity | 4.75E-04 |
| 21 | GO:0008276: protein methyltransferase activity | 4.75E-04 |
| 22 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 9.77E-04 |
| 23 | GO:0004017: adenylate kinase activity | 1.16E-03 |
| 24 | GO:0050897: cobalt ion binding | 1.28E-03 |
| 25 | GO:0008235: metalloexopeptidase activity | 1.36E-03 |
| 26 | GO:0015288: porin activity | 1.57E-03 |
| 27 | GO:0008135: translation factor activity, RNA binding | 1.79E-03 |
| 28 | GO:0008308: voltage-gated anion channel activity | 1.79E-03 |
| 29 | GO:0004177: aminopeptidase activity | 2.77E-03 |
| 30 | GO:0015266: protein channel activity | 3.31E-03 |
| 31 | GO:0019843: rRNA binding | 4.25E-03 |
| 32 | GO:0004407: histone deacetylase activity | 4.48E-03 |
| 33 | GO:0005528: FK506 binding | 4.48E-03 |
| 34 | GO:0004540: ribonuclease activity | 5.12E-03 |
| 35 | GO:0004298: threonine-type endopeptidase activity | 5.12E-03 |
| 36 | GO:0010181: FMN binding | 7.57E-03 |
| 37 | GO:0008237: metallopeptidase activity | 9.94E-03 |
| 38 | GO:0016597: amino acid binding | 1.04E-02 |
| 39 | GO:0005525: GTP binding | 1.09E-02 |
| 40 | GO:0008233: peptidase activity | 1.10E-02 |
| 41 | GO:0003697: single-stranded DNA binding | 1.54E-02 |
| 42 | GO:0003924: GTPase activity | 1.66E-02 |
| 43 | GO:0042393: histone binding | 1.69E-02 |
| 44 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.05E-02 |
| 45 | GO:0005524: ATP binding | 2.15E-02 |
| 46 | GO:0051082: unfolded protein binding | 2.93E-02 |
| 47 | GO:0000166: nucleotide binding | 2.95E-02 |
| 48 | GO:0008026: ATP-dependent helicase activity | 3.05E-02 |
| 49 | GO:0008565: protein transporter activity | 3.90E-02 |
| 50 | GO:0005515: protein binding | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 4.53E-21 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 5.07E-14 |
| 4 | GO:0022626: cytosolic ribosome | 6.07E-12 |
| 5 | GO:0005840: ribosome | 4.35E-10 |
| 6 | GO:0005739: mitochondrion | 7.88E-09 |
| 7 | GO:0005758: mitochondrial intermembrane space | 7.09E-08 |
| 8 | GO:0031428: box C/D snoRNP complex | 7.24E-08 |
| 9 | GO:0005829: cytosol | 1.05E-06 |
| 10 | GO:0005774: vacuolar membrane | 1.93E-06 |
| 11 | GO:0032040: small-subunit processome | 2.19E-06 |
| 12 | GO:0015934: large ribosomal subunit | 3.45E-06 |
| 13 | GO:0022627: cytosolic small ribosomal subunit | 9.21E-06 |
| 14 | GO:0005773: vacuole | 1.18E-05 |
| 15 | GO:0005743: mitochondrial inner membrane | 4.69E-05 |
| 16 | GO:0005742: mitochondrial outer membrane translocase complex | 5.37E-05 |
| 17 | GO:0005759: mitochondrial matrix | 6.64E-05 |
| 18 | GO:0015030: Cajal body | 8.11E-05 |
| 19 | GO:0070545: PeBoW complex | 1.97E-04 |
| 20 | GO:0005747: mitochondrial respiratory chain complex I | 3.14E-04 |
| 21 | GO:0030687: preribosome, large subunit precursor | 1.36E-03 |
| 22 | GO:0046930: pore complex | 1.79E-03 |
| 23 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.79E-03 |
| 24 | GO:0005618: cell wall | 2.13E-03 |
| 25 | GO:0009506: plasmodesma | 2.82E-03 |
| 26 | GO:0005834: heterotrimeric G-protein complex | 3.02E-03 |
| 27 | GO:0005737: cytoplasm | 3.27E-03 |
| 28 | GO:0070469: respiratory chain | 4.80E-03 |
| 29 | GO:0015935: small ribosomal subunit | 5.12E-03 |
| 30 | GO:0005741: mitochondrial outer membrane | 5.12E-03 |
| 31 | GO:0005839: proteasome core complex | 5.12E-03 |
| 32 | GO:0016592: mediator complex | 8.73E-03 |
| 33 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 9.93E-03 |
| 34 | GO:0000502: proteasome complex | 2.28E-02 |
| 35 | GO:0005635: nuclear envelope | 2.39E-02 |
| 36 | GO:0016020: membrane | 3.11E-02 |
| 37 | GO:0005654: nucleoplasm | 3.37E-02 |