co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G43800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
2	GO:0090393: sepal giant cell development	0.00E+00
3	GO:0009741: response to brassinosteroid	4.66E-05
4	GO:0071370: cellular response to gibberellin stimulus	1.22E-04
5	GO:0030388: fructose 1,6-bisphosphate metabolic process	2.82E-04
6	GO:2000123: positive regulation of stomatal complex development	2.82E-04
7	GO:0006833: water transport	3.77E-04
8	GO:0006000: fructose metabolic process	4.65E-04
9	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	4.65E-04
10	GO:0015840: urea transport	4.65E-04
11	GO:0017157: regulation of exocytosis	4.65E-04
12	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.93E-04
13	GO:0080170: hydrogen peroxide transmembrane transport	6.66E-04
14	GO:0032877: positive regulation of DNA endoreduplication	6.66E-04
15	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	6.66E-04
16	GO:0034220: ion transmembrane transport	7.61E-04
17	GO:0009742: brassinosteroid mediated signaling pathway	7.98E-04
18	GO:2000122: negative regulation of stomatal complex development	8.84E-04
19	GO:2000038: regulation of stomatal complex development	8.84E-04
20	GO:0006546: glycine catabolic process	8.84E-04
21	GO:0010037: response to carbon dioxide	8.84E-04
22	GO:0015976: carbon utilization	8.84E-04
23	GO:0071554: cell wall organization or biogenesis	9.99E-04
24	GO:0046785: microtubule polymerization	1.12E-03
25	GO:0016123: xanthophyll biosynthetic process	1.12E-03
26	GO:0010375: stomatal complex patterning	1.12E-03
27	GO:0007267: cell-cell signaling	1.27E-03
28	GO:0010358: leaf shaping	1.37E-03
29	GO:0016126: sterol biosynthetic process	1.42E-03
30	GO:0045926: negative regulation of growth	1.64E-03
31	GO:0009612: response to mechanical stimulus	1.64E-03
32	GO:0009554: megasporogenesis	1.64E-03
33	GO:0010555: response to mannitol	1.64E-03
34	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.64E-03
35	GO:2000067: regulation of root morphogenesis	1.64E-03
36	GO:0010411: xyloglucan metabolic process	1.67E-03
37	GO:0071555: cell wall organization	1.70E-03
38	GO:0009645: response to low light intensity stimulus	1.92E-03
39	GO:0051510: regulation of unidimensional cell growth	1.92E-03
40	GO:0016051: carbohydrate biosynthetic process	2.33E-03
41	GO:0009826: unidimensional cell growth	2.41E-03
42	GO:0007186: G-protein coupled receptor signaling pathway	2.54E-03
43	GO:0006002: fructose 6-phosphate metabolic process	2.54E-03
44	GO:0009744: response to sucrose	2.99E-03
45	GO:0042546: cell wall biogenesis	3.11E-03
46	GO:0016573: histone acetylation	3.21E-03
47	GO:0009638: phototropism	3.21E-03
48	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.57E-03
49	GO:0009750: response to fructose	3.94E-03
50	GO:0051603: proteolysis involved in cellular protein catabolic process	4.16E-03
51	GO:0050826: response to freezing	4.71E-03
52	GO:0009725: response to hormone	4.71E-03
53	GO:0006094: gluconeogenesis	4.71E-03
54	GO:0009767: photosynthetic electron transport chain	4.71E-03
55	GO:0005986: sucrose biosynthetic process	4.71E-03
56	GO:0019253: reductive pentose-phosphate cycle	5.12E-03
57	GO:0010167: response to nitrate	5.54E-03
58	GO:0005985: sucrose metabolic process	5.54E-03
59	GO:0006636: unsaturated fatty acid biosynthetic process	5.98E-03
60	GO:0006338: chromatin remodeling	6.42E-03
61	GO:0007017: microtubule-based process	6.87E-03
62	GO:0080092: regulation of pollen tube growth	7.81E-03
63	GO:0019748: secondary metabolic process	7.81E-03
64	GO:0010017: red or far-red light signaling pathway	7.81E-03
65	GO:0009294: DNA mediated transformation	8.30E-03
66	GO:0006284: base-excision repair	8.80E-03
67	GO:0019722: calcium-mediated signaling	8.80E-03
68	GO:0016117: carotenoid biosynthetic process	9.31E-03
69	GO:0000271: polysaccharide biosynthetic process	9.83E-03
70	GO:0080022: primary root development	9.83E-03
71	GO:0045489: pectin biosynthetic process	1.04E-02
72	GO:0009958: positive gravitropism	1.04E-02
73	GO:0010268: brassinosteroid homeostasis	1.04E-02
74	GO:0007059: chromosome segregation	1.09E-02
75	GO:0009791: post-embryonic development	1.15E-02
76	GO:0009749: response to glucose	1.15E-02
77	GO:0019252: starch biosynthetic process	1.15E-02
78	GO:0009617: response to bacterium	1.18E-02
79	GO:0016132: brassinosteroid biosynthetic process	1.20E-02
80	GO:0006810: transport	1.25E-02
81	GO:0010583: response to cyclopentenone	1.26E-02
82	GO:0048235: pollen sperm cell differentiation	1.26E-02
83	GO:0007264: small GTPase mediated signal transduction	1.26E-02
84	GO:0010090: trichome morphogenesis	1.32E-02
85	GO:0016125: sterol metabolic process	1.38E-02
86	GO:0051607: defense response to virus	1.50E-02
87	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.62E-02
88	GO:0042128: nitrate assimilation	1.69E-02
89	GO:0007049: cell cycle	1.71E-02
90	GO:0009817: defense response to fungus, incompatible interaction	1.88E-02
91	GO:0080167: response to karrikin	1.90E-02
92	GO:0009407: toxin catabolic process	2.02E-02
93	GO:0010218: response to far red light	2.02E-02
94	GO:0010119: regulation of stomatal movement	2.09E-02
95	GO:0006468: protein phosphorylation	2.20E-02
96	GO:0009867: jasmonic acid mediated signaling pathway	2.23E-02
97	GO:0045087: innate immune response	2.23E-02
98	GO:0008283: cell proliferation	2.67E-02
99	GO:0010114: response to red light	2.67E-02
100	GO:0016042: lipid catabolic process	2.73E-02
101	GO:0009636: response to toxic substance	2.90E-02
102	GO:0009753: response to jasmonic acid	3.01E-02
103	GO:0009585: red, far-red light phototransduction	3.30E-02
104	GO:0006508: proteolysis	3.74E-02
105	GO:0009740: gibberellic acid mediated signaling pathway	4.06E-02
106	GO:0042545: cell wall modification	4.15E-02
107	GO:0051726: regulation of cell cycle	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0048307: ferredoxin-nitrite reductase activity	0.00E+00
2	GO:0050613: delta14-sterol reductase activity	0.00E+00
3	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
4	GO:0050421: nitrite reductase (NO-forming) activity	0.00E+00
5	GO:0047889: ferredoxin-nitrate reductase activity	0.00E+00
6	GO:0003838: sterol 24-C-methyltransferase activity	1.22E-04
7	GO:0010012: steroid 22-alpha hydroxylase activity	1.22E-04
8	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.22E-04
9	GO:0010291: carotene beta-ring hydroxylase activity	2.82E-04
10	GO:0042389: omega-3 fatty acid desaturase activity	2.82E-04
11	GO:0004047: aminomethyltransferase activity	2.82E-04
12	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	2.82E-04
13	GO:0004185: serine-type carboxypeptidase activity	3.24E-04
14	GO:0031683: G-protein beta/gamma-subunit complex binding	4.65E-04
15	GO:0001664: G-protein coupled receptor binding	4.65E-04
16	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	6.66E-04
17	GO:0015204: urea transmembrane transporter activity	8.84E-04
18	GO:0019905: syntaxin binding	8.84E-04
19	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	8.84E-04
20	GO:0019901: protein kinase binding	9.36E-04
21	GO:0016762: xyloglucan:xyloglucosyl transferase activity	9.99E-04
22	GO:0017137: Rab GTPase binding	1.12E-03
23	GO:0008725: DNA-3-methyladenine glycosylase activity	1.12E-03
24	GO:0016413: O-acetyltransferase activity	1.35E-03
25	GO:0042578: phosphoric ester hydrolase activity	1.37E-03
26	GO:0080030: methyl indole-3-acetate esterase activity	1.37E-03
27	GO:0015250: water channel activity	1.42E-03
28	GO:0051753: mannan synthase activity	1.64E-03
29	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.64E-03
30	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.67E-03
31	GO:0043295: glutathione binding	1.92E-03
32	GO:0004564: beta-fructofuranosidase activity	2.22E-03
33	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.54E-03
34	GO:0016788: hydrolase activity, acting on ester bonds	2.59E-03
35	GO:0004575: sucrose alpha-glucosidase activity	3.21E-03
36	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.66E-03
37	GO:0004860: protein kinase inhibitor activity	3.94E-03
38	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.94E-03
39	GO:0004089: carbonate dehydratase activity	4.71E-03
40	GO:0008083: growth factor activity	5.12E-03
41	GO:0005528: FK506 binding	6.42E-03
42	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	7.33E-03
43	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	7.81E-03
44	GO:0004674: protein serine/threonine kinase activity	9.25E-03
45	GO:0004872: receptor activity	1.15E-02
46	GO:0048038: quinone binding	1.20E-02
47	GO:0004672: protein kinase activity	1.25E-02
48	GO:0016759: cellulose synthase activity	1.38E-02
49	GO:0008483: transaminase activity	1.44E-02
50	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.44E-02
51	GO:0005200: structural constituent of cytoskeleton	1.44E-02
52	GO:0005096: GTPase activator activity	1.95E-02
53	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.02E-02
54	GO:0052689: carboxylic ester hydrolase activity	2.10E-02
55	GO:0005525: GTP binding	2.12E-02
56	GO:0004871: signal transducer activity	2.38E-02
57	GO:0051539: 4 iron, 4 sulfur cluster binding	2.44E-02
58	GO:0004364: glutathione transferase activity	2.59E-02
59	GO:0003924: GTPase activity	2.81E-02
60	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.98E-02
61	GO:0045330: aspartyl esterase activity	3.55E-02
62	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.80E-02
63	GO:0004650: polygalacturonase activity	3.98E-02
64	GO:0030599: pectinesterase activity	4.06E-02
65	GO:0016757: transferase activity, transferring glycosyl groups	4.33E-02
66	GO:0020037: heme binding	4.81E-02
67	GO:0016758: transferase activity, transferring hexosyl groups	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	2.42E-06
2	GO:0005576: extracellular region	2.23E-05
3	GO:0048046: apoplast	1.16E-04
4	GO:0009344: nitrite reductase complex [NAD(P)H]	1.22E-04
5	GO:0009941: chloroplast envelope	2.52E-04
6	GO:0042170: plastid membrane	2.82E-04
7	GO:0005775: vacuolar lumen	6.66E-04
8	GO:0009543: chloroplast thylakoid lumen	9.79E-04
9	GO:0031225: anchored component of membrane	1.08E-03
10	GO:0009506: plasmodesma	1.42E-03
11	GO:0005618: cell wall	1.89E-03
12	GO:0042807: central vacuole	1.92E-03
13	GO:0000123: histone acetyltransferase complex	1.92E-03
14	GO:0000326: protein storage vacuole	2.54E-03
15	GO:0031902: late endosome membrane	2.76E-03
16	GO:0045298: tubulin complex	2.87E-03
17	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.87E-03
18	GO:0016324: apical plasma membrane	3.57E-03
19	GO:0005773: vacuole	3.57E-03
20	GO:0055028: cortical microtubule	3.57E-03
21	GO:0005765: lysosomal membrane	3.94E-03
22	GO:0030095: chloroplast photosystem II	5.12E-03
23	GO:0030176: integral component of endoplasmic reticulum membrane	5.54E-03
24	GO:0009654: photosystem II oxygen evolving complex	6.87E-03
25	GO:0000139: Golgi membrane	1.11E-02
26	GO:0019898: extrinsic component of membrane	1.15E-02
27	GO:0005886: plasma membrane	1.26E-02
28	GO:0046658: anchored component of plasma membrane	1.31E-02
29	GO:0009534: chloroplast thylakoid	1.43E-02
30	GO:0009570: chloroplast stroma	1.61E-02
31	GO:0005794: Golgi apparatus	1.98E-02
32	GO:0000325: plant-type vacuole	2.09E-02
33	GO:0000786: nucleosome	2.16E-02
34	GO:0005819: spindle	2.37E-02
35	GO:0031977: thylakoid lumen	2.52E-02
36	GO:0009507: chloroplast	2.81E-02
37	GO:0005887: integral component of plasma membrane	3.80E-02
38	GO:0005834: heterotrimeric G-protein complex	3.89E-02
39	GO:0009706: chloroplast inner membrane	4.24E-02